CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
CDX73678
CDX92401
CDX95314
CDY06478
CDY23174

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G36250.1	CDX73678	AT3G51920.1	17360592
AT4G36250.1	CDX95314	AT3G51920.1	17360592
AT4G36250.1	CDY23174	AT3G51920.1	17360592
AT4G36250.1	CDY06478	AT4G14640.1	17360592
AT4G36250.1	CDX92401	AT5G21274.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX77447	Canola	cytosol	98.96	98.96
CDX75566	Canola	cytosol	87.32	96.55
CDY59717	Canola	cytosol	93.56	92.98
CDY35463	Canola	cytosol	93.56	92.21
CDY24790	Canola	cytosol	92.72	91.39
CDX72584	Canola	cytosol	91.68	91.12
AT4G36250.1	Thale cress	cytosol	86.49	85.95
CDY21568	Canola	cytosol	14.55	72.16
CDY20864	Canola	extracellular	16.63	70.18
KRH69828	Soybean	cytosol	63.41	62.89
VIT_04s0023g02810.t01	Wine grape	cytosol	63.2	61.66
PGSC0003DMT400009314	Potato	cytosol	62.58	61.55
Solyc02g084640.2.1	Tomato	cytosol	60.71	59.71
KRH08130	Soybean	cytosol	63.83	57.92
GSMUA_Achr8P11740_001	Banana	cytosol	52.18	53.07
Zm00001d017418_P001	Maize	cytosol, mitochondrion	48.02	51.79
EES05817	Sorghum	cytosol	51.56	51.03
HORVU6Hr1G061220.6	Barley	cytosol	51.35	50.93
OQU82042	Sorghum	cytosol	52.39	50.81
CDY66167	Canola	endoplasmic reticulum, mitochondrion, nucleus	16.84	50.62
Os02t0646500-01	Rice	plasma membrane	50.73	50.1
TraesCS2B01G406900.1	Wheat	cytosol	51.14	50.0
TraesCSU01G066700.2	Wheat	cytosol	49.48	50.0
TraesCS6D01G222000.1	Wheat	cytosol	49.9	49.79
TraesCS6A01G239600.1	Wheat	cytosol	49.69	49.59
TraesCS6B01G284900.1	Wheat	cytosol	49.9	49.48
TraesCS2A01G388900.1	Wheat	cytosol	50.52	49.39
TraesCS6A01G240000.1	Wheat	cytosol	46.57	49.34
Os02t0647900-01	Rice	cytosol	50.31	49.29
TraesCS6D01G222300.1	Wheat	cytosol	49.48	49.17
TraesCS6B01G284600.1	Wheat	cytosol	49.27	48.97
Zm00001d025958_P001	Maize	cytosol	51.35	48.62
Os04t0540600-01	Rice	cytosol	50.1	48.3
CDY14976	Canola	cytosol	26.2	46.15
HORVU2Hr1G092540.1	Barley	extracellular, vacuole	8.52	46.07
TraesCS2D01G386700.1	Wheat	cytosol, plastid	50.52	45.85
CDY36018	Canola	cytosol	45.53	45.44
CDY36336	Canola	cytosol	45.32	45.23
CDY25655	Canola	cytosol	34.93	43.19
HORVU6Hr1G061270.3	Barley	golgi, mitochondrion, peroxisome	50.1	41.84
HORVU2Hr1G092530.1	Barley	peroxisome	40.33	39.59
CDX75414	Canola	mitochondrion, plastid	45.74	39.57
CDX69039	Canola	mitochondrion	45.11	39.53
CDY14975	Canola	cytosol, plastid	7.9	38.78
HORVU4Hr1G041570.1	Barley	plastid	19.13	34.33

Protein Annotations

Gene3D:3.40.309.10	Gene3D:3.40.605.10	MapMan:50.1.2	GO:A0A078BWM7	InterPro:Ald_DH/histidinol_DH	InterPro:Ald_DH_C
InterPro:Ald_DH_N	InterPro:Aldehyde_DH_NAD(P)	InterPro:Aldehyde_DH_dom	EnsemblPlants:CDX69216	ProteinID:CDX69216	ProteinID:CDX69216.1
GO:GO:0003674	GO:GO:0003824	GO:GO:0006081	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016491	GO:GO:0016620	GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00131020001	InterPro:IPR016162	InterPro:IPR016163
PFAM:PF00171	PIRSF:PIRSF036492	PANTHER:PTHR43570	PANTHER:PTHR43570:SF17	SUPFAM:SSF53720	UniParc:UPI0004EAEB2B

Description

BnaC01g02370D

Coordinates

chrLK031789:+:3515476..3518397

Molecular Weight (calculated)

53522.3 Da

IEP (calculated)

7.468

GRAVY (calculated)

-0.033

Length

481 amino acids

Sequence
(BLAST)

001: MEEIVDQSLR EMRETFASGR TRSVKWRKTQ LEAIIEMVKD NEDKMCDVLF QDLGKHSTEA FRDELGFVMR SATTALNCLD KWVVPKKSDL PLLFYPSTGK
101: VISEPYGTVL VLSSWNFPIS LSLDPMIGAI SAGNTVLLKA SELSPNASAF LAKTIPSYLD NKAIKVIEGG PDVATILLKH QWDKIFFTGS PKIGKIIMAA
201: AAEHLTPVTL ELGGKCPTIV DHHSVSKDMK SVAKRISGGK WGSCSGQACI SVDYVLVEKS YASTLIEMLK PMIRSFFGEN PKESGCLSRI VTKKHFQRLA
301: RLLNDPGVQA SIVYGGSMDE EKLYIEPTIL LDPPLDSEIM NEEIFGPILP IITLRDIQES IGFIKSKPKP LAIYAFTKDE NLKTRILSET SSGSVTFNDV
401: MIQYMCDALP FGGVGESGIG RYHGKYSFEC FSHEKAIMEG SLAMDLEARY PPWNSFKLTF LRLAFREAYF KLVLFMLGLK K

Best Arabidopsis Sequence Match ( AT4G36250.1 )
(BLAST)

001: MEAMKETVEE SLREMRETFA SGRTRSLKWR KAQIGAIYEM VKDNEDKICN ALFQDLGKHS TEAFRDELGV VLRTATVAIN CLDKWAVPKH SKLPLLFYPA
101: KGKVISEPYG TVLVLSSWNF PISLSLDPLI GAIAAGNTVL LKSSELSPNA SAFLAKTIPA YLDTKAIKVI EGGPDVATIL LQHQWDKIFF TGSPKIGRII
201: MAAAAQHLTP VTLELGGKCP TIVDHHTISK NIKSVVKRIA GGKWGSCNGQ ACISVDYVLI EKSFAPTLID MLKPTIKSFF GENPKESGCL SRIANKHHVQ
301: RLSRLLSDPR VQASIVYGGS IDEDKLYVEP TILLDPPLDS EIMNEEIFGP ILPIITVRDI QESIGIINTK PKPLAIYAFT NDENLKTRIL SETSSGSVTF
401: NDVMIQYMCD ALPFGGVGES GIGRYHGKYS FDCFSHEKAI MEGSLGMDLE ARYPPWNNFK LTFIRLAFRE AYFKLILLML GLKR

Arabidopsis Description

ALDH3F1Aldehyde dehydrogenase [Source:UniProtKB/TrEMBL;Acc:A0A178UZB9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.