Factsheet for VIT_04s0023g02810.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
EpiLoc:	mitochondrion
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
VIT_05s0020g04420.t01
VIT_06s0009g01910.t01
VIT_08s0040g00470.t01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G36250.1	VIT_06s0009g01910.t01	AT2G41090.1	17360592
AT4G36250.1	VIT_08s0040g00470.t01	AT2G41090.1	17360592
AT4G36250.1	VIT_06s0009g01910.t01	AT2G41100.1	17360592
AT4G36250.1	VIT_08s0040g00470.t01	AT2G41100.1	17360592
AT4G36250.1	VIT_05s0020g04420.t01	AT4G14640.1	17360592
AT4G36250.1	VIT_06s0009g01910.t01	AT5G21274.1	17360592
AT4G36250.1	VIT_08s0040g00470.t01	AT5G21274.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH69828	Soybean	cytosol	71.4	72.58
PGSC0003DMT400009314	Potato	cytosol	70.99	71.57
Solyc02g084640.2.1	Tomato	cytosol	70.39	70.96
KRH08130	Soybean	cytosol	70.39	65.47
CDX75566	Canola	cytosol	57.0	64.6
AT4G36250.1	Thale cress	cytosol	63.08	64.26
VIT_06s0004g02060.t01	Wine grape	cytosol	63.08	64.12
Bra011674.1-P	Field mustard	cytosol	62.27	63.83
CDX72584	Canola	cytosol	62.47	63.64
CDX77447	Canola	cytosol	62.07	63.62
CDX69216	Canola	cytosol	61.66	63.2
CDY59717	Canola	cytosol	61.87	63.02
Bra017753.1-P	Field mustard	cytosol	61.66	62.81
GSMUA_Achr8P11740_001	Banana	cytosol	60.04	62.58
CDY35463	Canola	cytosol	61.66	62.3
CDY24790	Canola	cytosol	61.46	62.09
Bra010553.1-P	Field mustard	cytosol	57.81	61.03
TraesCS2A01G388900.1	Wheat	cytosol	57.0	57.11
TraesCS2B01G406900.1	Wheat	cytosol	57.0	57.11
TraesCS6D01G222000.1	Wheat	cytosol	55.38	56.64
TraesCS6A01G239600.1	Wheat	cytosol	54.77	56.02
TraesCSU01G066700.2	Wheat	cytosol	53.96	55.88
HORVU6Hr1G061220.6	Barley	cytosol	54.97	55.88
Zm00001d017418_P001	Maize	cytosol, mitochondrion	50.3	55.61
TraesCS6B01G284900.1	Wheat	cytosol	54.56	55.46
HORVU2Hr1G092540.1	Barley	extracellular, vacuole	9.94	55.06
TraesCS6D01G222300.1	Wheat	cytosol	53.75	54.75
TraesCS6B01G284600.1	Wheat	cytosol	53.75	54.75
EES05817	Sorghum	cytosol	53.75	54.53
Os04t0540600-01	Rice	cytosol	54.77	54.11
OQU82042	Sorghum	cytosol	54.36	54.03
TraesCS6A01G240000.1	Wheat	cytosol	49.49	53.74
TraesCS2D01G386700.1	Wheat	cytosol, plastid	57.4	53.4
Os02t0646500-01	Rice	plasma membrane	52.54	53.18
Os02t0647900-01	Rice	cytosol	51.93	52.14
Zm00001d025958_P001	Maize	cytosol	53.35	51.77
CDY21568	Canola	cytosol	10.14	51.55
CDY20864	Canola	extracellular	11.76	50.88
HORVU6Hr1G061270.3	Barley	golgi, mitochondrion, peroxisome	53.55	45.83
HORVU2Hr1G092530.1	Barley	peroxisome	44.22	44.49
VIT_18s0001g02440.t01	Wine grape	endoplasmic reticulum, golgi	47.67	42.73
VIT_07s0031g02630.t01	Wine grape	plastid	46.04	41.42
HORVU4Hr1G041570.1	Barley	plastid	19.88	36.57

Protein Annotations

EntrezGene:100247106	wikigene:100247106	Gene3D:3.40.309.10	Gene3D:3.40.605.10	MapMan:50.1.2	InterPro:Ald_DH/histidinol_DH
InterPro:Ald_DH_C	InterPro:Ald_DH_N	InterPro:Aldehyde_DH_NAD(P)	InterPro:Aldehyde_DH_dom	ProteinID:CBI17422	ProteinID:CBI17422.3
UniProt:D7SP43	EMBL:FN594959	GO:GO:0003674	GO:GO:0003824	GO:GO:0004030	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005783	GO:GO:0006081	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016491	GO:GO:0016620
GO:GO:0055114	InterPro:IPR016162	InterPro:IPR016163	EntrezGene:LOC100247106	wikigene:LOC100247106	PFAM:PF00171
PIRSF:PIRSF036492	PANTHER:PTHR43570	PANTHER:PTHR43570:SF17	SUPFAM:SSF53720	TIGR:TC58606	TIGR:TC63600
TMHMM:TMhelix	UniParc:UPI0001BE0D09	ArrayExpress:VIT_04s0023g02810	EnsemblPlantsGene:VIT_04s0023g02810	EnsemblPlants:VIT_04s0023g02810.t01	unigene:Vvi.11796
RefSeq:XP_002273358	RefSeq:XP_002273358.1	SEG:seg	:	:	:

Description

Aldehyde dehydrogenase [Source:UniProtKB/TrEMBL;Acc:D7SP43]

Coordinates

chr4:-:19380582..19383896

Molecular Weight (calculated)

54852.8 Da

IEP (calculated)

8.206

GRAVY (calculated)

-0.005

Length

493 amino acids

Sequence
(BLAST)

001: MTGSGVNGMI GMEGGRVEES IGELRRTFRS GETRSAAWRK AQLKALLQLL RDNENKIFEA LKQDLGKHPV ESYRDELGVV EKSVKYSLSH VDEWMAPKKS
101: SLPLIFFPGK GQVLPEPLGL VLIFSSWNFP ISLALDPVIG AISAGNSVVL KPSEQAPACS SFLANTIPLY LDSKAIKVIE GGAAISQQLL QQKWDKIFFT
201: GSPSVARIVM SAAVKHLTPV TIELGGKCPT IFDNLSSPSD TEVAVKRVVG GKWGPCNGQA CIGVDYVLVE EKFASHLIEM LKKTIKKFYG ENPKELKDIS
301: KIVNKHHFQR LHNLLKEPLV AASIVHGGLI DEEKLFIEPT ILLDPPLDAE IMTEEIFGPL LPIITLKNIE ESIEFINSRP KPLALYAFTN DEAFKRRILS
401: ETSSGSVTFN DIIIQFVCDT LPFGGVGQSG FGRYHGKYSF DTFSHEKAVL RRSFFLELEP RFPPWNDFKL KFIRLVYSFD YLGLILLLLG LKR

Best Arabidopsis Sequence Match ( AT4G36250.1 )
(BLAST)

001: MEAMKETVEE SLREMRETFA SGRTRSLKWR KAQIGAIYEM VKDNEDKICN ALFQDLGKHS TEAFRDELGV VLRTATVAIN CLDKWAVPKH SKLPLLFYPA
101: KGKVISEPYG TVLVLSSWNF PISLSLDPLI GAIAAGNTVL LKSSELSPNA SAFLAKTIPA YLDTKAIKVI EGGPDVATIL LQHQWDKIFF TGSPKIGRII
201: MAAAAQHLTP VTLELGGKCP TIVDHHTISK NIKSVVKRIA GGKWGSCNGQ ACISVDYVLI EKSFAPTLID MLKPTIKSFF GENPKESGCL SRIANKHHVQ
301: RLSRLLSDPR VQASIVYGGS IDEDKLYVEP TILLDPPLDS EIMNEEIFGP ILPIITVRDI QESIGIINTK PKPLAIYAFT NDENLKTRIL SETSSGSVTF
401: NDVMIQYMCD ALPFGGVGES GIGRYHGKYS FDCFSHEKAI MEGSLGMDLE ARYPPWNNFK LTFIRLAFRE AYFKLILLML GLKR

Arabidopsis Description

ALDH3F1Aldehyde dehydrogenase [Source:UniProtKB/TrEMBL;Acc:A0A178UZB9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.