Factsheet for VIT_06s0004g02060.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
EpiLoc:	mitochondrion
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400051470	Potato	cytosol	40.0	68.07
Solyc01g013900.2.1	Tomato	cytosol	11.34	67.9
Solyc01g011510.2.1	Tomato	cytosol	68.66	66.6
KRH23132	Soybean	cytosol	67.22	65.99
Solyc01g012760.1.1	Tomato	cytosol	28.04	65.7
KRH10203	Soybean	cytosol	66.6	65.38
KRH29710	Soybean	cytosol	66.39	65.18
KRH24704	Soybean	cytosol	65.15	63.97
VIT_04s0023g02810.t01	Wine grape	cytosol	64.12	63.08
Solyc01g013890.1.1	Tomato	nucleus	35.26	61.73
Solyc01g012700.2.1	Tomato	cytosol	32.16	61.66
Solyc01g012750.1.1	Tomato	extracellular	10.72	49.06
VIT_18s0001g02440.t01	Wine grape	endoplasmic reticulum, golgi	48.25	42.55
VIT_07s0031g02630.t01	Wine grape	plastid	47.42	41.97
GSMUA_Achr6P17710_001	Banana	cytosol	10.1	34.03
HORVU6Hr1G001270.1	Barley	cytosol, peroxisome, plastid	6.8	32.35

Protein Annotations

EntrezGene:100253650	wikigene:100253650	Gene3D:3.40.309.10	Gene3D:3.40.605.10	MapMan:50.1.2	InterPro:Ald_DH/histidinol_DH
InterPro:Ald_DH_C	InterPro:Ald_DH_N	InterPro:Aldehyde_DH_NAD(P)	InterPro:Aldehyde_DH_dom	ProteinID:CBI16385	ProteinID:CBI16385.3
UniProt:D7SL57	EMBL:FN594951	GO:GO:0003674	GO:GO:0003824	GO:GO:0004030	GO:GO:0006081
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016491	GO:GO:0016620	GO:GO:0055114
InterPro:IPR016162	InterPro:IPR016163	EntrezGene:LOC100253650	wikigene:LOC100253650	PFAM:PF00171	PIRSF:PIRSF036492
PANTHER:PTHR43570	PANTHER:PTHR43570:SF13	SUPFAM:SSF53720	TIGR:TC56159	UniParc:UPI00015C7550	ArrayExpress:VIT_06s0004g02060
EnsemblPlantsGene:VIT_06s0004g02060	EnsemblPlants:VIT_06s0004g02060.t01	unigene:Vvi.10312	RefSeq:XP_002285466	RefSeq:XP_002285466.1	SEG:seg

Description

Aldehyde dehydrogenase [Source:UniProtKB/TrEMBL;Acc:D7SL57]

Coordinates

chr6:-:2522282..2528458

Molecular Weight (calculated)

54033.7 Da

IEP (calculated)

9.022

GRAVY (calculated)

-0.052

Length

485 amino acids

Sequence
(BLAST)

001: MAEIENLEPD LEELRESYRS GKTKEASWRK SQLKGLLTLL KEQEKDIFKA LEQDLGKHYA ESYRDEVGTL TKSVNLALSS LKDWMSSRKA KLPIATFPST
101: AEVFPEPLGL VLIISSWNFP FGLSLEPVIG AIAAGNSVVL KPSELAPASS SLLAKTIPTY LDKKAVKVIE GGAAVGEHLL RCKWDKIFFT GNPRVGRVVM
201: TAAANHLTPV TLELGGKCPA IFDSFSSSWD KEMVIKRVLG GKFGACAGQA CIAIDYILVQ EGFAPTLLEL LRNMTKKMFG ENPRETKSMA RIINKKHFLR
301: LKNILDDPSV QSCIVHGGGV DEDNLFIEPT ILMNPPLKAS IMTDEIFGPL LPIITLKKIE DSIEFINSRP KALAIYVFTK NETLKRRIIS ETSSGSVTFN
401: DAIIQYAADT IPFGGVGESG FGRYHGKFSF DTFTHEKAIL RRSLLTEFWF RFPPWNDFKL ALTKSAYRFD YFEFLLVLLG LKKNS

Best Arabidopsis Sequence Match ( AT4G36250.1 )
(BLAST)

001: MEAMKETVEE SLREMRETFA SGRTRSLKWR KAQIGAIYEM VKDNEDKICN ALFQDLGKHS TEAFRDELGV VLRTATVAIN CLDKWAVPKH SKLPLLFYPA
101: KGKVISEPYG TVLVLSSWNF PISLSLDPLI GAIAAGNTVL LKSSELSPNA SAFLAKTIPA YLDTKAIKVI EGGPDVATIL LQHQWDKIFF TGSPKIGRII
201: MAAAAQHLTP VTLELGGKCP TIVDHHTISK NIKSVVKRIA GGKWGSCNGQ ACISVDYVLI EKSFAPTLID MLKPTIKSFF GENPKESGCL SRIANKHHVQ
301: RLSRLLSDPR VQASIVYGGS IDEDKLYVEP TILLDPPLDS EIMNEEIFGP ILPIITVRDI QESIGIINTK PKPLAIYAFT NDENLKTRIL SETSSGSVTF
401: NDVMIQYMCD ALPFGGVGES GIGRYHGKYS FDCFSHEKAI MEGSLGMDLE ARYPPWNNFK LTFIRLAFRE AYFKLILLML GLKR

Arabidopsis Description

ALDH3F1Aldehyde dehydrogenase [Source:UniProtKB/TrEMBL;Acc:A0A178UZB9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.