Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc01g013900.2.1 | Tomato | cytosol | 36.72 | 93.83 |
| PGSC0003DMT400051470 | Potato | cytosol | 90.34 | 65.61 |
| Solyc01g012700.2.1 | Tomato | cytosol | 73.91 | 60.47 |
| Solyc01g011510.2.1 | Tomato | cytosol | 94.69 | 39.2 |
| Solyc01g013890.1.1 | Tomato | nucleus | 46.86 | 35.02 |
| VIT_06s0004g02060.t01 | Wine grape | cytosol | 65.7 | 28.04 |
| KRH10203 | Soybean | cytosol | 64.25 | 26.92 |
| KRH23132 | Soybean | cytosol | 63.77 | 26.72 |
| KRH24704 | Soybean | cytosol | 63.28 | 26.52 |
| KRH29710 | Soybean | cytosol | 62.32 | 26.11 |
| Solyc02g084640.2.1 | Tomato | cytosol | 59.9 | 25.36 |
| Solyc06g060250.2.1 | Tomato | cytosol, nucleus, unclear | 47.83 | 20.89 |
| GSMUA_Achr6P17710_001 | Banana | cytosol | 10.63 | 15.28 |
| HORVU6Hr1G001270.1 | Barley | cytosol, peroxisome, plastid | 0.97 | 1.96 |
| Solyc01g012750.1.1 | Tomato | extracellular | 0.48 | 0.94 |
Protein Annotations
| EnsemblPlants:Solyc01g012760.1.1 | EnsemblPlantsGene:Solyc01g012760.1 | Gene3D:3.40.309.10 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0016491 | GO:GO:0016620 | GO:GO:0055114 | InterPro:Ald_DH/histidinol_DH | InterPro:Ald_DH_C |
| InterPro:Aldehyde_DH_dom | InterPro:IPR016163 | PANTHER:PTHR43570 | PANTHER:PTHR43570:SF13 | PFAM:PF00171 | SUPFAM:SSF53720 |
| UniParc:UPI00027620ED | UniProt:K4AU12 | MapMan:35.1 | : | : | : |
Description
No Description!
Coordinates
chr1:+:10068220..10072170
Molecular Weight (calculated)
23537.2 Da
IEP (calculated)
6.975
GRAVY (calculated)
-0.220
Length
207 amino acids
Sequence
(BLAST)
(BLAST)
001: MLGENPNESH SISRIVNKNQ FLRLKNLLDE PMVKKSIIYG GSSDEDNLDI EPTVLLDPPV QSTIMADEIF GPLSPIITLD KIEDSIEFIN ARPKPLTIYA
101: FTKNEEFKRK ITKRTSSGSL VFNDTIIQYA TDTLPFGGVG QSGFGRYHGK FSFDTFSHEK AIAKRSFLTD IWFRYSPWSD HTLQLFRSAF IYDYISVVLI
201: TLGLKRA
101: FTKNEEFKRK ITKRTSSGSL VFNDTIIQYA TDTLPFGGVG QSGFGRYHGK FSFDTFSHEK AIAKRSFLTD IWFRYSPWSD HTLQLFRSAF IYDYISVVLI
201: TLGLKRA
001: MFYQQRVLVS LLRNSIKLAL KQLKNWMAPE KAKTSLTTFP ASAEIVSEPL GVVLVISAWN YPFLLSIDPV IGAISAGNAV VLKPSELAPA SSALLTKLLE
101: QYLDPSAVRV VEGAVTETSA LLEQKWDKIF YTGSSKIGRV IMAAAAKHLT PVVLELGGKS PVVVDSDTDL KVTVRRIIVG KWGCNNGQAC VSPDYILTTK
201: EYAPKLIDAM KLELEKFYGK NPIESKDMSR IVNSNHFDRL SKLLDEKEVS DKIVYGGEKD RENLKIAPTI LLDVPLDSLI MSEEIFGPLL PILTLNNLEE
301: SFDVIRSRPK PLAAYLFTHN KKLKERFAAT VSAGGIVVND IAVHLALHTL PFGGVGESGM GAYHGKFSFD AFSHKKAVLY RSLFGDSAVR YPPYSRGKLR
401: LLKALVDSNI FDLFKVLLGL A
101: QYLDPSAVRV VEGAVTETSA LLEQKWDKIF YTGSSKIGRV IMAAAAKHLT PVVLELGGKS PVVVDSDTDL KVTVRRIIVG KWGCNNGQAC VSPDYILTTK
201: EYAPKLIDAM KLELEKFYGK NPIESKDMSR IVNSNHFDRL SKLLDEKEVS DKIVYGGEKD RENLKIAPTI LLDVPLDSLI MSEEIFGPLL PILTLNNLEE
301: SFDVIRSRPK PLAAYLFTHN KKLKERFAAT VSAGGIVVND IAVHLALHTL PFGGVGESGM GAYHGKFSFD AFSHKKAVLY RSLFGDSAVR YPPYSRGKLR
401: LLKALVDSNI FDLFKVLLGL A
Arabidopsis Description
ALDH3H1Aldehyde dehydrogenase family 3 member H1 [Source:UniProtKB/Swiss-Prot;Acc:Q70DU8]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.