Factsheet for Solyc01g013900.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 3
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g012760.1.1	Tomato	cytosol	93.83	36.72
Solyc01g012700.2.1	Tomato	cytosol	95.06	30.43
PGSC0003DMT400051470	Potato	cytosol	95.06	27.02
Solyc01g011510.2.1	Tomato	cytosol	98.77	16.0
KRH29710	Soybean	cytosol	70.37	11.54
VIT_06s0004g02060.t01	Wine grape	cytosol	67.9	11.34
KRH24704	Soybean	cytosol	69.14	11.34
KRH10203	Soybean	cytosol	64.2	10.53
KRH23132	Soybean	cytosol	64.2	10.53
Solyc02g084640.2.1	Tomato	cytosol	60.49	10.02
Solyc06g060250.2.1	Tomato	cytosol, nucleus, unclear	44.44	7.59
GSMUA_Achr6P17710_001	Banana	cytosol	6.17	3.47
HORVU6Hr1G001270.1	Barley	cytosol, peroxisome, plastid	0.0	0.0
Solyc01g012750.1.1	Tomato	extracellular	0.0	0.0
Solyc01g013890.1.1	Tomato	nucleus	0.0	0.0

Protein Annotations

EnsemblPlants:Solyc01g013900.2.1	EnsemblPlantsGene:Solyc01g013900.2	Gene3D:3.40.309.10	Gene3D:3.40.605.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0016620	GO:GO:0055114	InterPro:Ald_DH/histidinol_DH
InterPro:Ald_DH_C	InterPro:Ald_DH_N	InterPro:IPR016162	InterPro:IPR016163	PANTHER:PTHR43570	PANTHER:PTHR43570:SF13
SUPFAM:SSF53720	UniParc:UPI00027620FC	UniProt:K4AU27	MapMan:35.1	:	:

Description

No Description!

Coordinates

chr1:+:10348095..10348362

Molecular Weight (calculated)

9372.2 Da

IEP (calculated)

9.832

GRAVY (calculated)

-0.073

Length

81 amino acids

Sequence
(BLAST)

1: MQYAADTLPF GGVGQSGFGR YHGKFSFDTF SHEKAIARRS FLTDIWFRYP PWSDHTLQLF RSAFIYDYLS VVLITLGLKR A

Best Arabidopsis Sequence Match ( AT4G36250.1 )
(BLAST)

001: MEAMKETVEE SLREMRETFA SGRTRSLKWR KAQIGAIYEM VKDNEDKICN ALFQDLGKHS TEAFRDELGV VLRTATVAIN CLDKWAVPKH SKLPLLFYPA
101: KGKVISEPYG TVLVLSSWNF PISLSLDPLI GAIAAGNTVL LKSSELSPNA SAFLAKTIPA YLDTKAIKVI EGGPDVATIL LQHQWDKIFF TGSPKIGRII
201: MAAAAQHLTP VTLELGGKCP TIVDHHTISK NIKSVVKRIA GGKWGSCNGQ ACISVDYVLI EKSFAPTLID MLKPTIKSFF GENPKESGCL SRIANKHHVQ
301: RLSRLLSDPR VQASIVYGGS IDEDKLYVEP TILLDPPLDS EIMNEEIFGP ILPIITVRDI QESIGIINTK PKPLAIYAFT NDENLKTRIL SETSSGSVTF
401: NDVMIQYMCD ALPFGGVGES GIGRYHGKYS FDCFSHEKAI MEGSLGMDLE ARYPPWNNFK LTFIRLAFRE AYFKLILLML GLKR

Arabidopsis Description

ALDH3F1Aldehyde dehydrogenase [Source:UniProtKB/TrEMBL;Acc:A0A178UZB9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.