Factsheet for Solyc01g012700.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
mitochondrion 2
cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g013900.2.1	Tomato	cytosol	30.43	95.06
PGSC0003DMT400051470	Potato	cytosol	88.54	78.6
Solyc01g012760.1.1	Tomato	cytosol	60.47	73.91
Solyc01g013890.1.1	Tomato	nucleus	52.17	47.65
Solyc01g011510.2.1	Tomato	cytosol	92.49	46.8
KRH10203	Soybean	cytosol	63.24	32.39
KRH23132	Soybean	cytosol	62.85	32.19
VIT_06s0004g02060.t01	Wine grape	cytosol	61.66	32.16
GSMUA_Achr6P17710_001	Banana	cytosol	17.79	31.25
KRH24704	Soybean	cytosol	60.47	30.97
KRH29710	Soybean	cytosol	60.08	30.77
Solyc02g084640.2.1	Tomato	cytosol	54.94	28.43
Solyc06g060250.2.1	Tomato	cytosol, nucleus, unclear	43.48	23.21
Solyc01g012750.1.1	Tomato	extracellular	0.79	1.89
HORVU6Hr1G001270.1	Barley	cytosol, peroxisome, plastid	0.0	0.0

Protein Annotations

Gene3D:3.40.309.10	Gene3D:3.40.605.10	MapMan:35.1	InterPro:Ald_DH/histidinol_DH	InterPro:Ald_DH_C	InterPro:Ald_DH_N
InterPro:Aldehyde_DH_dom	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491
GO:GO:0016620	GO:GO:0055114	InterPro:IPR016162	InterPro:IPR016163	UniProt:K4AU06	PFAM:PF00171
PANTHER:PTHR43570	PANTHER:PTHR43570:SF13	SUPFAM:SSF53720	EnsemblPlantsGene:Solyc01g012700.2	EnsemblPlants:Solyc01g012700.2.1	UniParc:UPI00027620E7

Description

No Description!

Coordinates

chr1:+:9873456..9877910

Molecular Weight (calculated)

28460.7 Da

IEP (calculated)

9.777

GRAVY (calculated)

-0.025

Length

253 amino acids

Sequence
(BLAST)

001: MAQIIMGAAA KHLTPVTLEL GAKCRAIIDS LSSSWDKKIA MKRILSGKFG NCAGQVCIGI DYILVDKTFV NELVKLIKPW IPKMLGENPK ESHSISRIVK
101: KNQFLRLKNL LDEPMVKKSI IYGGSSDEDN CIEFINAMPK PLTIYSFIKN EEFERKITKG TSSGSLVSND TIIQYAADTL PFGGVGQSGF GRYHGKFSFD
201: TFSHEKAIAR RSFLTDIWFR YSPWSDHTLQ LFRSAFIFDY LSVVLITLGL KWA

Best Arabidopsis Sequence Match ( AT4G36250.1 )
(BLAST)

001: MEAMKETVEE SLREMRETFA SGRTRSLKWR KAQIGAIYEM VKDNEDKICN ALFQDLGKHS TEAFRDELGV VLRTATVAIN CLDKWAVPKH SKLPLLFYPA
101: KGKVISEPYG TVLVLSSWNF PISLSLDPLI GAIAAGNTVL LKSSELSPNA SAFLAKTIPA YLDTKAIKVI EGGPDVATIL LQHQWDKIFF TGSPKIGRII
201: MAAAAQHLTP VTLELGGKCP TIVDHHTISK NIKSVVKRIA GGKWGSCNGQ ACISVDYVLI EKSFAPTLID MLKPTIKSFF GENPKESGCL SRIANKHHVQ
301: RLSRLLSDPR VQASIVYGGS IDEDKLYVEP TILLDPPLDS EIMNEEIFGP ILPIITVRDI QESIGIINTK PKPLAIYAFT NDENLKTRIL SETSSGSVTF
401: NDVMIQYMCD ALPFGGVGES GIGRYHGKYS FDCFSHEKAI MEGSLGMDLE ARYPPWNNFK LTFIRLAFRE AYFKLILLML GLKR

Arabidopsis Description

ALDH3F1Aldehyde dehydrogenase [Source:UniProtKB/TrEMBL;Acc:A0A178UZB9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.