Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G36250.1 | CDX73678 | AT3G51920.1 | 17360592 |
| AT4G36250.1 | CDX95314 | AT3G51920.1 | 17360592 |
| AT4G36250.1 | CDY23174 | AT3G51920.1 | 17360592 |
| AT4G36250.1 | CDY06478 | AT4G14640.1 | 17360592 |
| AT4G36250.1 | CDX92401 | AT5G21274.1 | 17360592 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY20864 | Canola | extracellular | 80.41 | 68.42 |
| CDX75566 | Canola | cytosol | 73.2 | 16.32 |
| Bra011674.1-P | Field mustard | cytosol | 73.2 | 14.76 |
| CDX77447 | Canola | cytosol | 73.2 | 14.76 |
| CDX69216 | Canola | cytosol | 72.16 | 14.55 |
| CDY59717 | Canola | cytosol | 68.04 | 13.64 |
| CDY35463 | Canola | cytosol | 68.04 | 13.52 |
| CDX72584 | Canola | cytosol | 67.01 | 13.43 |
| CDY24790 | Canola | cytosol | 65.98 | 13.11 |
| AT4G36250.1 | Thale cress | cytosol | 59.79 | 11.98 |
| CDY14976 | Canola | cytosol | 29.9 | 10.62 |
| VIT_04s0023g02810.t01 | Wine grape | cytosol | 51.55 | 10.14 |
| KRH69828 | Soybean | cytosol | 49.48 | 9.9 |
| PGSC0003DMT400009314 | Potato | cytosol | 48.45 | 9.61 |
| Solyc02g084640.2.1 | Tomato | cytosol | 47.42 | 9.41 |
| KRH08130 | Soybean | cytosol | 50.52 | 9.25 |
| CDY25655 | Canola | cytosol | 36.08 | 9.0 |
| Zm00001d017418_P001 | Maize | cytosol, mitochondrion | 36.08 | 7.85 |
| GSMUA_Achr8P11740_001 | Banana | cytosol | 38.14 | 7.82 |
| TraesCS2B01G406900.1 | Wheat | cytosol | 39.18 | 7.72 |
| OQU82042 | Sorghum | cytosol | 39.18 | 7.66 |
| TraesCSU01G066700.2 | Wheat | cytosol | 37.11 | 7.56 |
| TraesCS2A01G388900.1 | Wheat | cytosol | 38.14 | 7.52 |
| HORVU6Hr1G061220.6 | Barley | cytosol | 37.11 | 7.42 |
| EES05817 | Sorghum | cytosol | 37.11 | 7.41 |
| Os02t0646500-01 | Rice | plasma membrane | 37.11 | 7.39 |
| HORVU2Hr1G092530.1 | Barley | peroxisome | 37.11 | 7.35 |
| TraesCS6D01G222000.1 | Wheat | cytosol | 36.08 | 7.26 |
| TraesCS6D01G222300.1 | Wheat | cytosol | 36.08 | 7.23 |
| TraesCS6B01G284600.1 | Wheat | cytosol | 36.08 | 7.23 |
| TraesCS2D01G386700.1 | Wheat | cytosol, plastid | 39.18 | 7.17 |
| Os02t0647900-01 | Rice | cytosol | 36.08 | 7.13 |
| HORVU4Hr1G041570.1 | Barley | plastid | 19.59 | 7.09 |
| CDX69039 | Canola | mitochondrion | 39.18 | 6.92 |
| Zm00001d025958_P001 | Maize | cytosol | 36.08 | 6.89 |
| CDY36336 | Canola | cytosol | 34.02 | 6.85 |
| CDY36018 | Canola | cytosol | 34.02 | 6.85 |
| TraesCS6A01G239600.1 | Wheat | cytosol | 34.02 | 6.85 |
| Os04t0540600-01 | Rice | cytosol | 35.05 | 6.81 |
| TraesCS6B01G284900.1 | Wheat | cytosol | 34.02 | 6.8 |
| CDX75414 | Canola | mitochondrion, plastid | 38.14 | 6.65 |
| TraesCS6A01G240000.1 | Wheat | cytosol | 30.93 | 6.61 |
| HORVU6Hr1G061270.3 | Barley | golgi, mitochondrion, peroxisome | 37.11 | 6.25 |
| HORVU2Hr1G092540.1 | Barley | extracellular, vacuole | 2.06 | 2.25 |
| CDY66167 | Canola | endoplasmic reticulum, mitochondrion, nucleus | 2.06 | 1.25 |
| CDY14975 | Canola | cytosol, plastid | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDY21568 | EnsemblPlantsGene:GSBRNA2T00016029001 | Gene3D:3.40.309.10 | GO:A0A078GA46 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016491 | GO:GO:0016620 | GO:GO:0055114 | InterPro:Ald_DH/histidinol_DH |
| InterPro:Ald_DH_C | InterPro:IPR016163 | PANTHER:PTHR43570 | PANTHER:PTHR43570:SF17 | ProteinID:CDY21568 | ProteinID:CDY21568.1 |
| SUPFAM:SSF53720 | UniParc:UPI0004EEA7AC | UniProt:A0A078GA46 | MapMan:35.1 | : | : |
Description
BnaC09g47240DBnaC09g47240D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GA46]
Coordinates
chrLK032122:+:282099..283439
Molecular Weight (calculated)
10673.8 Da
IEP (calculated)
6.225
GRAVY (calculated)
0.055
Length
97 amino acids
Sequence
(BLAST)
(BLAST)
1: MISNGHEVGC EENLWRECGS CSGQACISVD YVFVEQSFAS SLIETLKPMI RSFFGENPKE SGCLSRIVTK KHFRLAHLLN DPGVQASIVY GGSTIFL
001: MEAMKETVEE SLREMRETFA SGRTRSLKWR KAQIGAIYEM VKDNEDKICN ALFQDLGKHS TEAFRDELGV VLRTATVAIN CLDKWAVPKH SKLPLLFYPA
101: KGKVISEPYG TVLVLSSWNF PISLSLDPLI GAIAAGNTVL LKSSELSPNA SAFLAKTIPA YLDTKAIKVI EGGPDVATIL LQHQWDKIFF TGSPKIGRII
201: MAAAAQHLTP VTLELGGKCP TIVDHHTISK NIKSVVKRIA GGKWGSCNGQ ACISVDYVLI EKSFAPTLID MLKPTIKSFF GENPKESGCL SRIANKHHVQ
301: RLSRLLSDPR VQASIVYGGS IDEDKLYVEP TILLDPPLDS EIMNEEIFGP ILPIITVRDI QESIGIINTK PKPLAIYAFT NDENLKTRIL SETSSGSVTF
401: NDVMIQYMCD ALPFGGVGES GIGRYHGKYS FDCFSHEKAI MEGSLGMDLE ARYPPWNNFK LTFIRLAFRE AYFKLILLML GLKR
101: KGKVISEPYG TVLVLSSWNF PISLSLDPLI GAIAAGNTVL LKSSELSPNA SAFLAKTIPA YLDTKAIKVI EGGPDVATIL LQHQWDKIFF TGSPKIGRII
201: MAAAAQHLTP VTLELGGKCP TIVDHHTISK NIKSVVKRIA GGKWGSCNGQ ACISVDYVLI EKSFAPTLID MLKPTIKSFF GENPKESGCL SRIANKHHVQ
301: RLSRLLSDPR VQASIVYGGS IDEDKLYVEP TILLDPPLDS EIMNEEIFGP ILPIITVRDI QESIGIINTK PKPLAIYAFT NDENLKTRIL SETSSGSVTF
401: NDVMIQYMCD ALPFGGVGES GIGRYHGKYS FDCFSHEKAI MEGSLGMDLE ARYPPWNNFK LTFIRLAFRE AYFKLILLML GLKR
Arabidopsis Description
ALDH3F1Aldehyde dehydrogenase [Source:UniProtKB/TrEMBL;Acc:A0A178UZB9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.