Factsheet for Os02t0646500-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 4
plastid 1
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

plasma membrane: 15069638
plasma membrane: 27800704

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

msms PMID: 15069638 doi

N Tanaka, M Fujita, H Handa, S Murayama, M Uemura, Y Kawamura, T Mitsui, S Mikami, Y Tozawa, T Yoshinaga, S Komatsu

Department of Molecular Genetics, National Institute of Agrobiological Sciences, 305-8602, Tsukuba, Japan.

PPI

Inferred distinct locusB in Crop

locusB	locations
Os01t0267900-01
Os01t0279300-01
Os01t0810300-01
Os03t0319300-01
Os03t0743500-02
Os05t0491000-01
Os05t0491100-01
Os07t0687200-02
Os12t0603800-00

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G36250.1	Os01t0267900-01	AT2G41090.1	17360592
AT4G36250.1	Os01t0279300-01	AT2G41090.1	17360592
AT4G36250.1	Os01t0810300-01	AT2G41090.1	17360592
AT4G36250.1	Os03t0319300-01	AT2G41090.1	17360592
AT4G36250.1	Os05t0491000-01	AT2G41090.1	17360592
AT4G36250.1	Os05t0491100-01	AT2G41090.1	17360592
AT4G36250.1	Os07t0687200-02	AT2G41090.1	17360592
AT4G36250.1	Os12t0603800-00	AT2G41090.1	17360592
AT4G36250.1	Os01t0267900-01	AT2G41100.1	17360592
AT4G36250.1	Os01t0279300-01	AT2G41100.1	17360592
AT4G36250.1	Os01t0810300-01	AT2G41100.1	17360592
AT4G36250.1	Os03t0319300-01	AT2G41100.1	17360592
AT4G36250.1	Os05t0491000-01	AT2G41100.1	17360592
AT4G36250.1	Os05t0491100-01	AT2G41100.1	17360592
AT4G36250.1	Os07t0687200-02	AT2G41100.1	17360592
AT4G36250.1	Os12t0603800-00	AT2G41100.1	17360592
AT4G36250.1	Os03t0743500-02	AT4G14640.1	17360592
AT4G36250.1	Os01t0267900-01	AT5G21274.1	17360592
AT4G36250.1	Os01t0279300-01	AT5G21274.1	17360592
AT4G36250.1	Os01t0810300-01	AT5G21274.1	17360592
AT4G36250.1	Os03t0319300-01	AT5G21274.1	17360592
AT4G36250.1	Os05t0491000-01	AT5G21274.1	17360592
AT4G36250.1	Os05t0491100-01	AT5G21274.1	17360592
AT4G36250.1	Os07t0687200-02	AT5G21274.1	17360592
AT4G36250.1	Os12t0603800-00	AT5G21274.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6A01G239600.1	Wheat	cytosol	77.62	78.42
TraesCS6D01G222000.1	Wheat	cytosol	77.0	77.8
TraesCS6B01G284900.1	Wheat	cytosol	77.0	77.32
HORVU6Hr1G061220.6	Barley	cytosol	76.18	76.49
EES05817	Sorghum	cytosol	76.18	76.34
Zm00001d017418_P001	Maize	cytosol, mitochondrion	69.4	75.78
Os02t0647900-01	Rice	cytosol	73.31	72.71
Os04t0540600-01	Rice	cytosol	62.01	60.52
GSMUA_Achr8P11740_001	Banana	cytosol	54.41	56.03
Solyc02g084640.2.1	Tomato	cytosol	54.0	53.78
PGSC0003DMT400009314	Potato	cytosol	53.59	53.37
KRH69828	Soybean	cytosol	52.77	52.99
VIT_04s0023g02810.t01	Wine grape	cytosol	53.18	52.54
CDX75566	Canola	cytosol	46.41	51.95
Bra011674.1-P	Field mustard	cytosol	50.72	51.35
CDX77447	Canola	cytosol	50.51	51.14
CDY59717	Canola	cytosol	50.51	50.83
AT4G36250.1	Thale cress	cytosol	50.51	50.83
CDX72584	Canola	cytosol	50.51	50.83
CDX69216	Canola	cytosol	50.1	50.73
Bra017753.1-P	Field mustard	cytosol	50.31	50.62
CDY35463	Canola	cytosol	50.1	50.0
CDY24790	Canola	cytosol	49.69	49.59
KRH08130	Soybean	cytosol	53.18	48.87
Bra010553.1-P	Field mustard	cytosol	46.41	48.39
Os11t0186200-01	Rice	cytosol, nucleus, plasma membrane, plastid	46.61	47.1
Os12t0178000-01	Rice	endoplasmic reticulum	34.91	46.32
CDY20864	Canola	extracellular	8.83	37.72
CDY21568	Canola	cytosol	7.39	37.11

Protein Annotations

Gene3D:3.40.309.10	Gene3D:3.40.605.10	EntrezGene:4330146	MapMan:50.1.2	EMBL:AK070741	InterPro:Ald_DH/histidinol_DH
InterPro:Ald_DH_C	InterPro:Ald_DH_N	InterPro:Aldehyde_DH_NAD(P)	InterPro:Aldehyde_DH_dom	ProteinID:BAD25521.1	ProteinID:BAD25822.1
ProteinID:BAF09489.1	ProteinID:BAS80029.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004030	GO:GO:0005575
GO:GO:0006081	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
GO:GO:0016491	GO:GO:0016620	GO:GO:0055114	InterPro:IPR016162	InterPro:IPR016163	EnsemblPlantsGene:Os02g0646500
EnsemblPlants:Os02t0646500-01	PFAM:PF00171	PIRSF:PIRSF036492	PANTHER:PTHR43570	PANTHER:PTHR43570:SF17	UniProt:Q6H627
SUPFAM:SSF53720	TMHMM:TMhelix	UniParc:UPI00003B44B3	RefSeq:XP_015623875.1	SEG:seg	:

Description

aldehyde dehydrogenase, Aldehyde Dehydrogenase-Like ProteinAldehyde dehydrogenase domain containing protein. (Os02t0646500-01)

Coordinates

chr2:-:26034336..26041422

Molecular Weight (calculated)

54456.3 Da

IEP (calculated)

7.031

GRAVY (calculated)

0.014

Length

487 amino acids

Sequence
(BLAST)

001: MEEKPQHGSL GGLVAGVREE YESGRTKELE WRKAQLGGLI RMITEEEDAI FDALHDDLGK HRVESFRDEV GVLAKSVRNT LQNLKKWASP EKVDVPLISF
101: PCNARVVPEP IGVVLIFSCW NLPIGLALEP LSGAIAAGNA VVLKPSEFAP STAAFLAANI PKYLDANAVK VVQGGAEVGE ELMEHRWDKV LFTGNARVGR
201: IIMTKAAKHL TPVALELGSK CPCIVDCLDS KRECQVAVNR IIGAKWSTCA GQACVAIDYI LVEEQFAPFL IELLKSTLKR FFTEPEYMAR ILNEKHFHRL
301: TNLLEDDQVK SSIVHGGNAD PKTLWIEPTI VLNPPFDSDI MMEEIFGPLL PIITVKKTED CIAFLKSKPK PLAIYAFTNN EKLKQRIVAE TSSGSVLFND
401: AIVQYGLDSV PFGGIGESGF GQYHGKYTFE LFSHRKAVVR RSLLVEFMFR YPPWDEYKMG MLRRVFRFDY VSLVLALLAF WLLGIRR

Best Arabidopsis Sequence Match ( AT4G36250.1 )
(BLAST)

001: MEAMKETVEE SLREMRETFA SGRTRSLKWR KAQIGAIYEM VKDNEDKICN ALFQDLGKHS TEAFRDELGV VLRTATVAIN CLDKWAVPKH SKLPLLFYPA
101: KGKVISEPYG TVLVLSSWNF PISLSLDPLI GAIAAGNTVL LKSSELSPNA SAFLAKTIPA YLDTKAIKVI EGGPDVATIL LQHQWDKIFF TGSPKIGRII
201: MAAAAQHLTP VTLELGGKCP TIVDHHTISK NIKSVVKRIA GGKWGSCNGQ ACISVDYVLI EKSFAPTLID MLKPTIKSFF GENPKESGCL SRIANKHHVQ
301: RLSRLLSDPR VQASIVYGGS IDEDKLYVEP TILLDPPLDS EIMNEEIFGP ILPIITVRDI QESIGIINTK PKPLAIYAFT NDENLKTRIL SETSSGSVTF
401: NDVMIQYMCD ALPFGGVGES GIGRYHGKYS FDCFSHEKAI MEGSLGMDLE ARYPPWNNFK LTFIRLAFRE AYFKLILLML GLKR

Arabidopsis Description

ALDH3F1Aldehyde dehydrogenase [Source:UniProtKB/TrEMBL;Acc:A0A178UZB9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.