CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
KRG89812
KRG94975
KRH18664
KRH31638
KRH69070

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G36250.1	KRG89812	AT2G41090.1	17360592
AT4G36250.1	KRG94975	AT2G41090.1	17360592
AT4G36250.1	KRH18664	AT2G41090.1	17360592
AT4G36250.1	KRG89812	AT2G41100.1	17360592
AT4G36250.1	KRG94975	AT2G41100.1	17360592
AT4G36250.1	KRH18664	AT2G41100.1	17360592
AT4G36250.1	KRH31638	AT4G14640.1	17360592
AT4G36250.1	KRH69070	AT4G14640.1	17360592
AT4G36250.1	KRG89812	AT5G21274.1	17360592
AT4G36250.1	KRG94975	AT5G21274.1	17360592
AT4G36250.1	KRH18664	AT5G21274.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH69828	Soybean	cytosol	85.85	93.81
VIT_04s0023g02810.t01	Wine grape	cytosol	65.47	70.39
PGSC0003DMT400009314	Potato	cytosol	63.02	68.3
Solyc02g084640.2.1	Tomato	cytosol	62.26	67.48
CDX75566	Canola	cytosol	53.21	64.83
Bra011674.1-P	Field mustard	cytosol	58.49	64.45
CDX77447	Canola	cytosol	58.11	64.03
CDX69216	Canola	cytosol	57.92	63.83
AT4G36250.1	Thale cress	cytosol	57.36	62.81
Bra017753.1-P	Field mustard	cytosol	57.36	62.81
CDY59717	Canola	cytosol	57.17	62.6
CDX72584	Canola	cytosol	56.98	62.4
CDY35463	Canola	cytosol	56.98	61.89
CDY24790	Canola	cytosol	56.42	61.27
Bra010553.1-P	Field mustard	cytosol	52.64	59.74
GSMUA_Achr8P11740_001	Banana	cytosol	53.21	59.62
KRH23132	Soybean	cytosol	53.4	57.29
TraesCSU01G066700.2	Wheat	cytosol	50.57	56.3
HORVU2Hr1G092540.1	Barley	extracellular, vacuole	9.43	56.18
KRH10203	Soybean	cytosol	52.26	56.07
TraesCS2A01G388900.1	Wheat	cytosol	51.7	55.69
TraesCS2B01G406900.1	Wheat	cytosol	51.7	55.69
KRH24704	Soybean	cytosol	51.7	55.47
OQU82042	Sorghum	cytosol	51.89	55.44
Zm00001d017418_P001	Maize	cytosol, mitochondrion	46.6	55.38
KRH29710	Soybean	cytosol	51.51	55.26
TraesCS6D01G222000.1	Wheat	cytosol	49.81	54.77
TraesCS6A01G239600.1	Wheat	cytosol	49.62	54.56
TraesCS6B01G284600.1	Wheat	cytosol	49.81	54.55
HORVU6Hr1G061220.6	Barley	cytosol	49.62	54.23
TraesCS6D01G222300.1	Wheat	cytosol	49.43	54.13
EES05817	Sorghum	cytosol	49.62	54.12
TraesCS6A01G240000.1	Wheat	cytosol	46.23	53.96
TraesCS6B01G284900.1	Wheat	cytosol	49.25	53.81
Os04t0540600-01	Rice	cytosol	50.38	53.51
Os02t0646500-01	Rice	plasma membrane	48.87	53.18
Zm00001d025958_P001	Maize	cytosol	50.19	52.36
TraesCS2D01G386700.1	Wheat	cytosol, plastid	52.26	52.26
CDY20864	Canola	extracellular	11.13	51.75
CDY21568	Canola	cytosol	9.25	50.52
Os02t0647900-01	Rice	cytosol	46.79	50.51
KRH64661	Soybean	cytosol	43.4	47.13
KRH16375	Soybean	endoplasmic reticulum, extracellular	43.77	46.77
KRH17967	Soybean	endoplasmic reticulum	43.58	46.57
KRH53251	Soybean	cytosol	42.64	46.03
HORVU6Hr1G061270.3	Barley	golgi, mitochondrion, peroxisome	50.0	46.01
HORVU2Hr1G092530.1	Barley	peroxisome	40.57	43.88
KRH40972	Soybean	plastid	42.08	41.22
HORVU4Hr1G041570.1	Barley	plastid	17.74	35.07

Protein Annotations

Gene3D:3.40.309.10	Gene3D:3.40.605.10	MapMan:50.1.2	EMBL:ACUP02010143	InterPro:Ald_DH/histidinol_DH	InterPro:Ald_DH_C
InterPro:Ald_DH_N	InterPro:Aldehyde_DH_NAD(P)	InterPro:Aldehyde_DH_dom	EnsemblPlantsGene:GLYMA_16G131700	GO:GO:0003674	GO:GO:0003824
GO:GO:0004030	GO:GO:0006081	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016491
GO:GO:0016620	GO:GO:0055114	UniProt:I1MN90	InterPro:IPR016162	InterPro:IPR016163	EnsemblPlants:KRH08130
ProteinID:KRH08130	ProteinID:KRH08130.1	PFAM:PF00171	PIRSF:PIRSF036492	PANTHER:PTHR43570	PANTHER:PTHR43570:SF17
SUPFAM:SSF53720	UniParc:UPI00023D6C17	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr16:+:28678260..28682437

Molecular Weight (calculated)

59614.4 Da

IEP (calculated)

7.295

GRAVY (calculated)

-0.101

Length

530 amino acids

Sequence
(BLAST)

001: MRPPHYKYSC PHEWEGSVEE NKKEKENNQY DNFAILVVDQ GRSIAMDIGG EVEETVRELR QYFKTGKTKS VTWRKNQLTA LLDLVHENED AIFKALHQDL
101: GKHPVEAYRD EVGGVEKSAS NALSCVEKWM APKKSDIPFL FFPAKGEVLS EPLGVVLIFS SWNFPIILTL DPIIGAISAG NVVVIKPSEQ SPASSSFLAT
201: TIPRYLDSNA IKVIEGGPDV CEQLLLQKWD KIFFTGSPRV ASVVMSAAAK NLTPVTLELG GKCPAILDSL PNPLEFKLAV KRIVGGKWGP CSGQACIAID
301: YLLVEKKFSY ALIELLKKII RRFYGENPVE SKVISRILNK QHFERLCNLL KDPLVAASIV HGGSVDEENL FIEPTILLDP PLDSQIMSEE IFGPLLPIIT
401: MDKIQESIEF INAKPKPLAI YAFTKDETFK RNILSETSSG SVVFNDTMVQ FLCDTLPFGG VGQSGFGRYH GKYSFDTFSH EKAVMHRKLF LEIEPRYPPW
501: SKFKLEFIRL AYRLNYFGLL LHMLGLKRYK

Best Arabidopsis Sequence Match ( AT4G36250.1 )
(BLAST)

001: MEAMKETVEE SLREMRETFA SGRTRSLKWR KAQIGAIYEM VKDNEDKICN ALFQDLGKHS TEAFRDELGV VLRTATVAIN CLDKWAVPKH SKLPLLFYPA
101: KGKVISEPYG TVLVLSSWNF PISLSLDPLI GAIAAGNTVL LKSSELSPNA SAFLAKTIPA YLDTKAIKVI EGGPDVATIL LQHQWDKIFF TGSPKIGRII
201: MAAAAQHLTP VTLELGGKCP TIVDHHTISK NIKSVVKRIA GGKWGSCNGQ ACISVDYVLI EKSFAPTLID MLKPTIKSFF GENPKESGCL SRIANKHHVQ
301: RLSRLLSDPR VQASIVYGGS IDEDKLYVEP TILLDPPLDS EIMNEEIFGP ILPIITVRDI QESIGIINTK PKPLAIYAFT NDENLKTRIL SETSSGSVTF
401: NDVMIQYMCD ALPFGGVGES GIGRYHGKYS FDCFSHEKAI MEGSLGMDLE ARYPPWNNFK LTFIRLAFRE AYFKLILLML GLKR

Arabidopsis Description

ALDH3F1Aldehyde dehydrogenase [Source:UniProtKB/TrEMBL;Acc:A0A178UZB9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.