CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
CDX73678
CDX92401
CDX95314
CDY06478
CDY23174

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G36250.1	CDX73678	AT3G51920.1	17360592
AT4G36250.1	CDX95314	AT3G51920.1	17360592
AT4G36250.1	CDY23174	AT3G51920.1	17360592
AT4G36250.1	CDY06478	AT4G14640.1	17360592
AT4G36250.1	CDX92401	AT5G21274.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra011674.1-P	Field mustard	cytosol	98.62	89.19
CDX77447	Canola	cytosol	97.7	88.36
CDX69216	Canola	cytosol	96.55	87.32
CDY59717	Canola	cytosol	92.41	83.06
CDY35463	Canola	cytosol	91.95	81.97
CDX72584	Canola	cytosol	90.57	81.41
CDY24790	Canola	cytosol	91.03	81.15
AT4G36250.1	Thale cress	cytosol	86.9	78.1
CDY21568	Canola	cytosol	16.32	73.2
CDY20864	Canola	extracellular	18.85	71.93
KRH69828	Soybean	cytosol	64.6	57.94
PGSC0003DMT400009314	Potato	cytosol	64.14	57.06
VIT_04s0023g02810.t01	Wine grape	cytosol	64.6	57.0
Solyc02g084640.2.1	Tomato	cytosol	62.07	55.21
KRH08130	Soybean	cytosol	64.83	53.21
CDY66167	Canola	endoplasmic reticulum, mitochondrion, nucleus	18.62	50.62
GSMUA_Achr8P11740_001	Banana	cytosol	54.71	50.32
Zm00001d017418_P001	Maize	cytosol, mitochondrion	49.43	48.21
OQU82042	Sorghum	cytosol	54.48	47.78
EES05817	Sorghum	cytosol	53.33	47.74
HORVU6Hr1G061220.6	Barley	cytosol	53.1	47.63
TraesCSU01G066700.2	Wheat	cytosol	51.49	47.06
TraesCS2B01G406900.1	Wheat	cytosol	53.1	46.95
CDY14976	Canola	cytosol	29.2	46.52
TraesCS6A01G239600.1	Wheat	cytosol	51.49	46.47
Os02t0646500-01	Rice	plasma membrane	51.95	46.41
TraesCS2A01G388900.1	Wheat	cytosol	52.41	46.34
TraesCS6D01G222000.1	Wheat	cytosol	51.26	46.27
HORVU2Hr1G092540.1	Barley	extracellular, vacuole	9.43	46.07
TraesCS6A01G240000.1	Wheat	cytosol	48.05	46.04
TraesCS6B01G284900.1	Wheat	cytosol	51.26	45.98
TraesCS6D01G222300.1	Wheat	cytosol	51.03	45.87
Os02t0647900-01	Rice	cytosol	51.72	45.82
Zm00001d025958_P001	Maize	cytosol	53.33	45.67
TraesCS6B01G284600.1	Wheat	cytosol	50.8	45.66
Os04t0540600-01	Rice	cytosol	52.18	45.49
TraesCS2D01G386700.1	Wheat	cytosol, plastid	52.41	43.02
CDY36018	Canola	cytosol	47.59	42.95
CDY36336	Canola	cytosol	47.59	42.95
CDY25655	Canola	cytosol	36.32	40.62
HORVU2Hr1G092530.1	Barley	peroxisome	45.52	40.41
HORVU6Hr1G061270.3	Barley	golgi, mitochondrion, peroxisome	51.95	39.24
CDY14975	Canola	cytosol, plastid	8.28	36.73
CDX75414	Canola	mitochondrion, plastid	46.67	36.51
CDX69039	Canola	mitochondrion	45.98	36.43
HORVU4Hr1G041570.1	Barley	plastid	21.38	34.7

Protein Annotations

Gene3D:3.40.309.10	Gene3D:3.40.605.10	MapMan:50.1.2	GO:A0A078CEL5	InterPro:Ald_DH/histidinol_DH	InterPro:Ald_DH_C
InterPro:Ald_DH_N	InterPro:Aldehyde_DH_NAD(P)	InterPro:Aldehyde_DH_dom	EnsemblPlants:CDX75566	ProteinID:CDX75566	ProteinID:CDX75566.1
GO:GO:0003674	GO:GO:0003824	GO:GO:0006081	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016491	GO:GO:0016620	GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00121471001	InterPro:IPR016162	InterPro:IPR016163
PFAM:PF00171	PIRSF:PIRSF036492	PANTHER:PTHR43570	PANTHER:PTHR43570:SF17	SUPFAM:SSF53720	UniParc:UPI0004EF315B

Description

BnaA01g01360D

Coordinates

chrLK031804:+:1688826..1691770

Molecular Weight (calculated)

48096.7 Da

IEP (calculated)

8.257

GRAVY (calculated)

0.043

Length

435 amino acids

Sequence
(BLAST)

001: MEEVVDQSLR EMRDTFASGR TRNLLATTAL NCLDKWVVPK KSNLPLLFYP STGKVISEPY GTVLVLSSWN FPISLSLDPL IGAISAGNTV LLKASELSPN
101: ASAFLAKTIP SYLDNKAIKV IEGGPDVATI LLKHQWDKIF FTGSPRIGKI IMAAAAEHLT PVTLELGGKC PTIVDHHSVS KDMKSVVKRI SGGKWGSCSG
201: QACISVDYVL VEKSFASSLI EMLKPMIRSF FGENPKESGC LSRIVNKKHF QRLARLLNDP GVQASIVYGG SMDEEKLYIE PTILLDPPLD SEIMNEEIFG
301: PILPIITLRD IQESIGFIKS KPKPLAIYAF TKDENLKTRI LSETSSGSVT FNDVMIQYMC DALPFGGVGE SGIGRYHGKY SFECFSHEKA IMEGSLAMDL
401: EARYPPWNSF KLTFLRLAFR EAYFKLVLFM LGLKK

Best Arabidopsis Sequence Match ( AT1G44170.1 )
(BLAST)

001: MAAKKVFGSA EASNLVTELR RSFDDGVTRG YEWRVTQLKK LMIICDNHEP EIVAALRDDL GKPELESSVY EVSLLRNSIK LALKQLKNWM APEKAKTSLT
101: TFPASAEIVS EPLGVVLVIS AWNYPFLLSI DPVIGAISAG NAVVLKPSEL APASSALLTK LLEQYLDPSA VRVVEGAVTE TSALLEQKWD KIFYTGSSKI
201: GRVIMAAAAK HLTPVVLELG GKSPVVVDSD TDLKVTVRRI IVGKWGCNNG QACVSPDYIL TTKEYAPKLI DAMKLELEKF YGKNPIESKD MSRIVNSNHF
301: DRLSKLLDEK EVSDKIVYGG EKDRENLKIA PTILLDVPLD SLIMSEEIFG PLLPILTLNN LEESFDVIRS RPKPLAAYLF THNKKLKERF AATVSAGGIV
401: VNDIAVHLAL HTLPFGGVGE SGMGAYHGKF SFDAFSHKKA VLYRSLFGDS AVRYPPYSRG KLRLLKALVD SNIFDLFKVL LGLA

Arabidopsis Description

ALDH3H1Aldehyde dehydrogenase family 3 member H1 [Source:UniProtKB/Swiss-Prot;Acc:Q70DU8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.