Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
- endoplasmic reticulum 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6B01G284600.1 | Wheat | cytosol | 88.45 | 86.98 |
| TraesCS6D01G222300.1 | Wheat | cytosol | 87.61 | 86.16 |
| TraesCS6A01G240000.1 | Wheat | cytosol | 80.25 | 84.14 |
| Zm00001d017418_P001 | Maize | cytosol, mitochondrion | 71.01 | 75.78 |
| EES05817 | Sorghum | cytosol | 76.26 | 74.69 |
| Os02t0647900-01 | Rice | cytosol | 75.42 | 73.12 |
| HORVU6Hr1G061270.3 | Barley | golgi, mitochondrion, peroxisome | 88.45 | 73.09 |
| Solyc02g084640.2.1 | Tomato | cytosol | 59.24 | 57.67 |
| PGSC0003DMT400009314 | Potato | cytosol | 59.24 | 57.67 |
| GSMUA_Achr8P11740_001 | Banana | cytosol | 56.51 | 56.87 |
| KRH69828 | Soybean | cytosol | 55.25 | 54.23 |
| VIT_04s0023g02810.t01 | Wine grape | cytosol | 55.88 | 53.96 |
| CDX75566 | Canola | cytosol | 47.06 | 51.49 |
| KRH08130 | Soybean | cytosol | 56.3 | 50.57 |
| Bra011674.1-P | Field mustard | cytosol | 50.84 | 50.31 |
| CDX72584 | Canola | cytosol | 51.05 | 50.21 |
| CDX77447 | Canola | cytosol | 50.63 | 50.1 |
| CDY59717 | Canola | cytosol | 50.84 | 50.0 |
| AT4G36250.1 | Thale cress | cytosol | 50.63 | 49.79 |
| Bra017753.1-P | Field mustard | cytosol | 50.63 | 49.79 |
| CDX69216 | Canola | cytosol | 50.0 | 49.48 |
| CDY35463 | Canola | cytosol | 50.0 | 48.77 |
| CDY24790 | Canola | cytosol | 49.58 | 48.36 |
| Bra010553.1-P | Field mustard | cytosol | 46.43 | 47.32 |
| CDY20864 | Canola | extracellular | 9.24 | 38.6 |
| CDY21568 | Canola | cytosol | 7.56 | 37.11 |
Protein Annotations
| Gene3D:3.40.309.10 | Gene3D:3.40.605.10 | MapMan:50.1.2 | InterPro:Ald_DH/histidinol_DH | InterPro:Ald_DH_C | InterPro:Ald_DH_N |
| InterPro:Aldehyde_DH_NAD(P) | InterPro:Aldehyde_DH_dom | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005783 | GO:GO:0006081 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016491 | GO:GO:0016620 | GO:GO:0055114 | InterPro:IPR016162 |
| InterPro:IPR016163 | PFAM:PF00171 | PIRSF:PIRSF036492 | PANTHER:PTHR43570 | PANTHER:PTHR43570:SF17 | SUPFAM:SSF53720 |
| EnsemblPlantsGene:TraesCSU01G066700 | EnsemblPlants:TraesCSU01G066700.2 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chrUn:+:51895630..51902901
Molecular Weight (calculated)
52891.8 Da
IEP (calculated)
9.467
GRAVY (calculated)
0.027
Length
476 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRFHESLGS LQEVRESGRT KDLAWRRSQL RGLLRLLTEK EDDIFGVLHD DLGKHRAESY RDELGLLVKS VNHTLRNLEK WAAPEKAQAP LVSFPATALV
101: VPEPLGVVLI FSCWNLPLGL ALEPLSGALA AGNAVVVKPS ELAPYTAAFL AANIPRYLDP RAVKVVLGGP EVGEQLMELR WDKVLFTGSA RVGRTILTKA
201: AKHLTPVVLE LGSKCPCIVD QLYSKRDRQI AVNRMAGAKW SVCAGQACAA IDYILVEEKF APILIGLLKS TVKRFTTTPE CMARILNAKH FQRLSNFLVD
301: DKVAASVVHG GSVNPKTLTI EPTILLNPPL HSDIMTEEIF GPLLPIITVK KIEDSIKFVN SMPKPLAIYA FTKNEKLKHQ IIDETSSGSV TFNDAIVQYA
401: VEGLPFGGVG ESGFGQYHGK YTFELFSHKK AVFKRSFLIE FMFRYPPWDD TKTEMLRRVY NTNYILLLLG LLGLRR
101: VPEPLGVVLI FSCWNLPLGL ALEPLSGALA AGNAVVVKPS ELAPYTAAFL AANIPRYLDP RAVKVVLGGP EVGEQLMELR WDKVLFTGSA RVGRTILTKA
201: AKHLTPVVLE LGSKCPCIVD QLYSKRDRQI AVNRMAGAKW SVCAGQACAA IDYILVEEKF APILIGLLKS TVKRFTTTPE CMARILNAKH FQRLSNFLVD
301: DKVAASVVHG GSVNPKTLTI EPTILLNPPL HSDIMTEEIF GPLLPIITVK KIEDSIKFVN SMPKPLAIYA FTKNEKLKHQ IIDETSSGSV TFNDAIVQYA
401: VEGLPFGGVG ESGFGQYHGK YTFELFSHKK AVFKRSFLIE FMFRYPPWDD TKTEMLRRVY NTNYILLLLG LLGLRR
001: MAAKKVFGSA EASNLVTELR RSFDDGVTRG YEWRVTQLKK LMIICDNHEP EIVAALRDDL GKPELESSVY EVSLLRNSIK LALKQLKNWM APEKAKTSLT
101: TFPASAEIVS EPLGVVLVIS AWNYPFLLSI DPVIGAISAG NAVVLKPSEL APASSALLTK LLEQYLDPSA VRVVEGAVTE TSALLEQKWD KIFYTGSSKI
201: GRVIMAAAAK HLTPVVLELG GKSPVVVDSD TDLKVTVRRI IVGKWGCNNG QACVSPDYIL TTKEYAPKLI DAMKLELEKF YGKNPIESKD MSRIVNSNHF
301: DRLSKLLDEK EVSDKIVYGG EKDRENLKIA PTILLDVPLD SLIMSEEIFG PLLPILTLNN LEESFDVIRS RPKPLAAYLF THNKKLKERF AATVSAGGIV
401: VNDIAVHLAL HTLPFGGVGE SGMGAYHGKF SFDAFSHKKA VLYRSLFGDS AVRYPPYSRG KLRLLKALVD SNIFDLFKVL LGLA
101: TFPASAEIVS EPLGVVLVIS AWNYPFLLSI DPVIGAISAG NAVVLKPSEL APASSALLTK LLEQYLDPSA VRVVEGAVTE TSALLEQKWD KIFYTGSSKI
201: GRVIMAAAAK HLTPVVLELG GKSPVVVDSD TDLKVTVRRI IVGKWGCNNG QACVSPDYIL TTKEYAPKLI DAMKLELEKF YGKNPIESKD MSRIVNSNHF
301: DRLSKLLDEK EVSDKIVYGG EKDRENLKIA PTILLDVPLD SLIMSEEIFG PLLPILTLNN LEESFDVIRS RPKPLAAYLF THNKKLKERF AATVSAGGIV
401: VNDIAVHLAL HTLPFGGVGE SGMGAYHGKF SFDAFSHKKA VLYRSLFGDS AVRYPPYSRG KLRLLKALVD SNIFDLFKVL LGLA
Arabidopsis Description
ALDH3H1Aldehyde dehydrogenase family 3 member H1 [Source:UniProtKB/Swiss-Prot;Acc:Q70DU8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.