CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
CDX73678
CDX92401
CDX95314
CDY06478
CDY23174

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G36250.1	CDX73678	AT3G51920.1	17360592
AT4G36250.1	CDX95314	AT3G51920.1	17360592
AT4G36250.1	CDY23174	AT3G51920.1	17360592
AT4G36250.1	CDY06478	AT4G14640.1	17360592
AT4G36250.1	CDX92401	AT5G21274.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY24790	Canola	cytosol	98.98	98.98
CDY59717	Canola	cytosol	93.85	94.63
CDX69216	Canola	cytosol	92.21	93.56
CDX77447	Canola	cytosol	92.01	93.35
CDX72584	Canola	cytosol	92.21	92.98
CDX75566	Canola	cytosol	81.97	91.95
AT4G36250.1	Thale cress	cytosol	86.89	87.6
CDY21568	Canola	cytosol	13.52	68.04
CDY20864	Canola	extracellular	15.78	67.54
PGSC0003DMT400009314	Potato	cytosol	62.91	62.78
KRH69828	Soybean	cytosol	61.89	62.27
VIT_04s0023g02810.t01	Wine grape	cytosol	62.3	61.66
Solyc02g084640.2.1	Tomato	cytosol	60.86	60.74
KRH08130	Soybean	cytosol	61.89	56.98
GSMUA_Achr8P11740_001	Banana	cytosol	51.84	53.49
Zm00001d017418_P001	Maize	cytosol, mitochondrion	48.57	53.14
OQU82042	Sorghum	cytosol	52.87	52.02
EES05817	Sorghum	cytosol	51.64	51.85
HORVU6Hr1G061220.6	Barley	cytosol	51.43	51.75
TraesCS2B01G406900.1	Wheat	cytosol	51.64	51.22
TraesCS6A01G239600.1	Wheat	cytosol	50.2	50.83
TraesCS6B01G284600.1	Wheat	cytosol	50.2	50.62
TraesCS2A01G388900.1	Wheat	cytosol	51.02	50.61
TraesCS6A01G240000.1	Wheat	cytosol	46.93	50.44
TraesCS6D01G222000.1	Wheat	cytosol	49.8	50.41
TraesCS6D01G222300.1	Wheat	cytosol	50.0	50.41
TraesCS6B01G284900.1	Wheat	cytosol	50.0	50.31
Os02t0646500-01	Rice	plasma membrane	50.0	50.1
TraesCSU01G066700.2	Wheat	cytosol	48.77	50.0
Os02t0647900-01	Rice	cytosol	50.2	49.9
Zm00001d025958_P001	Maize	cytosol	51.64	49.61
CDY66167	Canola	endoplasmic reticulum, mitochondrion, nucleus	16.19	49.38
Os04t0540600-01	Rice	cytosol	50.0	48.9
HORVU2Hr1G092540.1	Barley	extracellular, vacuole	8.61	47.19
TraesCS2D01G386700.1	Wheat	cytosol, plastid	51.23	47.17
CDY14976	Canola	cytosol	26.02	46.52
CDY36018	Canola	cytosol	44.88	45.44
CDY36336	Canola	cytosol	44.67	45.23
CDY25655	Canola	cytosol	34.63	43.44
HORVU6Hr1G061270.3	Barley	golgi, mitochondrion, peroxisome	50.41	42.71
HORVU2Hr1G092530.1	Barley	peroxisome	40.78	40.61
CDX75414	Canola	mitochondrion, plastid	43.85	38.49
CDX69039	Canola	mitochondrion	43.24	38.43
CDY14975	Canola	cytosol, plastid	7.38	36.73
HORVU4Hr1G041570.1	Barley	plastid	19.26	35.07

Protein Annotations

Gene3D:3.40.309.10	Gene3D:3.40.605.10	MapMan:50.1.2	GO:A0A078HF71	UniProt:A0A078HF71	InterPro:Ald_DH/histidinol_DH
InterPro:Ald_DH_C	InterPro:Ald_DH_N	InterPro:Aldehyde_DH_NAD(P)	InterPro:Aldehyde_DH_dom	EnsemblPlants:CDY35463	ProteinID:CDY35463
ProteinID:CDY35463.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004030	GO:GO:0006081	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016491	GO:GO:0016620	GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00058482001
InterPro:IPR016162	InterPro:IPR016163	PFAM:PF00171	PIRSF:PIRSF036492	PANTHER:PTHR43570	PANTHER:PTHR43570:SF17
SUPFAM:SSF53720	UniParc:UPI0004EB5850	:	:	:	:

Description

BnaC03g61970DAldehyde dehydrogenase [Source:UniProtKB/TrEMBL;Acc:A0A078HF71]

Coordinates

chrLK032352:+:217112..219806

Molecular Weight (calculated)

54198.3 Da

IEP (calculated)

8.608

GRAVY (calculated)

-0.017

Length

488 amino acids

Sequence
(BLAST)

001: MEAMKETVDQ SLREMRETFA SGRTRSVKWR KAQLGAIIEM VKDNEEKMSD VLFQDLGKHS TEAFRDELGF VMRSATTALN CLDKWVVPKK SNLPLLFYPA
101: TGKVISEPYG TVLVLSSWNF PISLSLDPMI GAIAAGNTVL LKASELSPNA SALLAKLIPS YLDTKAIKVI EGGPDVATIL LQHQWDKIFF TGSPKIGKII
201: MAAAAEHLTP VTLELGGKCP TIIDHHSVSK DMKSVVKRIS GGKWGSCSGQ ACISVDYVLV EQSFASTLID MLKPVIRSFF GENPKESGCL ARIVTKKHFQ
301: RLSRLLNDPR VKASIVYGGS MDEEKLYVEP TILLDPPLDS EIMNEEIFGP ILPIITLRDI QESIGFIKSK PKPLAIYAFT KDENLKTRIL SETSSGSVTF
401: NDLMIQYMCD ALPFGGVGQS GIGRYHGKYS FECFSHEKAI MEGSLAMDLE ARYPPWNNFK LNFIRLAFRE AYFKLVLLML GLTKGMRK

Best Arabidopsis Sequence Match ( AT4G36250.1 )
(BLAST)

001: MEAMKETVEE SLREMRETFA SGRTRSLKWR KAQIGAIYEM VKDNEDKICN ALFQDLGKHS TEAFRDELGV VLRTATVAIN CLDKWAVPKH SKLPLLFYPA
101: KGKVISEPYG TVLVLSSWNF PISLSLDPLI GAIAAGNTVL LKSSELSPNA SAFLAKTIPA YLDTKAIKVI EGGPDVATIL LQHQWDKIFF TGSPKIGRII
201: MAAAAQHLTP VTLELGGKCP TIVDHHTISK NIKSVVKRIA GGKWGSCNGQ ACISVDYVLI EKSFAPTLID MLKPTIKSFF GENPKESGCL SRIANKHHVQ
301: RLSRLLSDPR VQASIVYGGS IDEDKLYVEP TILLDPPLDS EIMNEEIFGP ILPIITVRDI QESIGIINTK PKPLAIYAFT NDENLKTRIL SETSSGSVTF
401: NDVMIQYMCD ALPFGGVGES GIGRYHGKYS FDCFSHEKAI MEGSLGMDLE ARYPPWNNFK LTFIRLAFRE AYFKLILLML GLKR

Arabidopsis Description

ALDH3F1Aldehyde dehydrogenase [Source:UniProtKB/TrEMBL;Acc:A0A178UZB9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.