Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6D01G222300.1 | Wheat | cytosol | 91.85 | 86.16 |
| TraesCS6B01G284600.1 | Wheat | cytosol | 91.85 | 86.16 |
| TraesCSU01G066700.2 | Wheat | cytosol | 84.14 | 80.25 |
| Zm00001d017418_P001 | Maize | cytosol, mitochondrion | 71.37 | 72.65 |
| HORVU6Hr1G061270.3 | Barley | golgi, mitochondrion, peroxisome | 90.97 | 71.7 |
| TraesCS6A01G239600.1 | Wheat | cytosol | 73.79 | 69.5 |
| EES05817 | Sorghum | cytosol | 72.69 | 67.9 |
| Os02t0647900-01 | Rice | cytosol | 72.91 | 67.41 |
| TraesCS2A01G388900.1 | Wheat | cytosol | 63.88 | 58.94 |
| GSMUA_Achr8P11740_001 | Banana | cytosol | 56.83 | 54.55 |
| PGSC0003DMT400009314 | Potato | cytosol | 56.39 | 52.35 |
| Solyc02g084640.2.1 | Tomato | cytosol | 55.95 | 51.94 |
| VIT_04s0023g02810.t01 | Wine grape | cytosol | 53.74 | 49.49 |
| KRH69828 | Soybean | cytosol | 52.86 | 49.48 |
| CDX75566 | Canola | cytosol | 46.04 | 48.05 |
| CDX72584 | Canola | cytosol | 51.1 | 47.93 |
| Bra010553.1-P | Field mustard | cytosol | 48.46 | 47.11 |
| CDY59717 | Canola | cytosol | 50.22 | 47.11 |
| CDX77447 | Canola | cytosol | 49.78 | 46.99 |
| CDY35463 | Canola | cytosol | 50.44 | 46.93 |
| Bra017753.1-P | Field mustard | cytosol | 50.0 | 46.9 |
| Bra011674.1-P | Field mustard | cytosol | 49.56 | 46.78 |
| AT4G36250.1 | Thale cress | cytosol | 49.78 | 46.69 |
| CDX69216 | Canola | cytosol | 49.34 | 46.57 |
| CDY24790 | Canola | cytosol | 50.0 | 46.52 |
| KRH08130 | Soybean | cytosol | 53.96 | 46.23 |
| TraesCS5A01G113200.1 | Wheat | cytosol | 43.83 | 41.46 |
| TraesCS4A01G219900.1 | Wheat | cytosol, golgi, unclear | 43.83 | 41.37 |
| CDY21568 | Canola | cytosol | 6.61 | 30.93 |
| CDY20864 | Canola | extracellular | 7.27 | 28.95 |
Protein Annotations
| Gene3D:3.40.309.10 | Gene3D:3.40.605.10 | MapMan:35.1 | InterPro:Ald_DH/histidinol_DH | InterPro:Ald_DH_C | InterPro:Ald_DH_N |
| InterPro:Aldehyde_DH_NAD(P) | InterPro:Aldehyde_DH_dom | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0006081 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016491 | GO:GO:0016620 | GO:GO:0055114 | InterPro:IPR016162 |
| InterPro:IPR016163 | PFAM:PF00171 | PIRSF:PIRSF036492 | PANTHER:PTHR43570 | PANTHER:PTHR43570:SF17 | SUPFAM:SSF53720 |
| EnsemblPlantsGene:TraesCS6A01G240000 | EnsemblPlants:TraesCS6A01G240000.1 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr6A:+:450089382..450095360
Molecular Weight (calculated)
50548.5 Da
IEP (calculated)
7.955
GRAVY (calculated)
-0.024
Length
454 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSLHENPQH GFGGLLSGLQ EAYESGRTKD LAWRRAQLKG LLRLLAEEEE DIFDALHDDL GKHRAESYRD EAQAPLVSFP ATALVVPEPL GVVLVFSCWN
101: LPLGLALEPI SGALAAGNVV VVKPSELAPS TAAFLAANIA RYLDPKAVKV ILGGPEVGEQ LMEHRWDKVL FTGSANVGRL ILTKAAKHLT PVALELGSKC
201: PCIVDQLDSK RDRQRERNGK YVPAKHVLPF DYILVEEKFA PILIELLKST VKRFTTTPEC MARILNAKHF RRLSNFLDDD RVACSVVHGG SVNEKTLTIE
301: PTILLNPPLD SDIMTEEIFG PLLPIITVKI EDTIKFVTSM PKPLAIYAFT KNEKLKHRII DETSSGSITF NDAIVQYAVE GLPFGGVGQS GFGQYHGKYS
401: FELFSNKKAV FKRSFLIEFM FRYPPWDDSK IRMLRHVFNT NYILLLLGLL GLRR
101: LPLGLALEPI SGALAAGNVV VVKPSELAPS TAAFLAANIA RYLDPKAVKV ILGGPEVGEQ LMEHRWDKVL FTGSANVGRL ILTKAAKHLT PVALELGSKC
201: PCIVDQLDSK RDRQRERNGK YVPAKHVLPF DYILVEEKFA PILIELLKST VKRFTTTPEC MARILNAKHF RRLSNFLDDD RVACSVVHGG SVNEKTLTIE
301: PTILLNPPLD SDIMTEEIFG PLLPIITVKI EDTIKFVTSM PKPLAIYAFT KNEKLKHRII DETSSGSITF NDAIVQYAVE GLPFGGVGQS GFGQYHGKYS
401: FELFSNKKAV FKRSFLIEFM FRYPPWDDSK IRMLRHVFNT NYILLLLGLL GLRR
001: MAAKKVFGSA EASNLVTELR RSFDDGVTRG YEWRVTQLKK LMIICDNHEP EIVAALRDDL GKPELESSVY EVSLLRNSIK LALKQLKNWM APEKAKTSLT
101: TFPASAEIVS EPLGVVLVIS AWNYPFLLSI DPVIGAISAG NAVVLKPSEL APASSALLTK LLEQYLDPSA VRVVEGAVTE TSALLEQKWD KIFYTGSSKI
201: GRVIMAAAAK HLTPVVLELG GKSPVVVDSD TDLKVTVRRI IVGKWGCNNG QACVSPDYIL TTKEYAPKLI DAMKLELEKF YGKNPIESKD MSRIVNSNHF
301: DRLSKLLDEK EVSDKIVYGG EKDRENLKIA PTILLDVPLD SLIMSEEIFG PLLPILTLNN LEESFDVIRS RPKPLAAYLF THNKKLKERF AATVSAGGIV
401: VNDIAVHLAL HTLPFGGVGE SGMGAYHGKF SFDAFSHKKA VLYRSLFGDS AVRYPPYSRG KLRLLKALVD SNIFDLFKVL LGLA
101: TFPASAEIVS EPLGVVLVIS AWNYPFLLSI DPVIGAISAG NAVVLKPSEL APASSALLTK LLEQYLDPSA VRVVEGAVTE TSALLEQKWD KIFYTGSSKI
201: GRVIMAAAAK HLTPVVLELG GKSPVVVDSD TDLKVTVRRI IVGKWGCNNG QACVSPDYIL TTKEYAPKLI DAMKLELEKF YGKNPIESKD MSRIVNSNHF
301: DRLSKLLDEK EVSDKIVYGG EKDRENLKIA PTILLDVPLD SLIMSEEIFG PLLPILTLNN LEESFDVIRS RPKPLAAYLF THNKKLKERF AATVSAGGIV
401: VNDIAVHLAL HTLPFGGVGE SGMGAYHGKF SFDAFSHKKA VLYRSLFGDS AVRYPPYSRG KLRLLKALVD SNIFDLFKVL LGLA
Arabidopsis Description
ALDH3H1Aldehyde dehydrogenase family 3 member H1 [Source:UniProtKB/Swiss-Prot;Acc:Q70DU8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.