Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G406900.1 | Wheat | cytosol | 98.17 | 98.17 |
| TraesCS2D01G386700.1 | Wheat | cytosol, plastid | 98.98 | 91.89 |
| HORVU2Hr1G092540.1 | Barley | extracellular, vacuole | 16.06 | 88.76 |
| Os04t0540600-01 | Rice | cytosol | 78.05 | 76.95 |
| OQU82042 | Sorghum | cytosol | 74.8 | 74.19 |
| Zm00001d025958_P001 | Maize | cytosol | 73.17 | 70.87 |
| HORVU2Hr1G092530.1 | Barley | peroxisome | 67.89 | 68.16 |
| TraesCS6A01G239600.1 | Wheat | cytosol | 66.46 | 67.84 |
| TraesCS6A01G240000.1 | Wheat | cytosol | 58.94 | 63.88 |
| GSMUA_Achr8P11740_001 | Banana | cytosol | 57.32 | 59.62 |
| PGSC0003DMT400009314 | Potato | cytosol | 57.32 | 57.67 |
| Solyc02g084640.2.1 | Tomato | cytosol | 57.11 | 57.46 |
| HORVU4Hr1G041570.1 | Barley | plastid | 31.3 | 57.46 |
| VIT_04s0023g02810.t01 | Wine grape | cytosol | 57.11 | 57.0 |
| KRH69828 | Soybean | cytosol | 54.88 | 55.67 |
| CDX75566 | Canola | cytosol | 46.34 | 52.41 |
| AT4G36250.1 | Thale cress | cytosol | 51.42 | 52.27 |
| KRH08130 | Soybean | cytosol | 55.69 | 51.7 |
| CDX72584 | Canola | cytosol | 50.61 | 51.45 |
| Bra011674.1-P | Field mustard | cytosol | 50.2 | 51.35 |
| CDY59717 | Canola | cytosol | 50.41 | 51.24 |
| Bra017753.1-P | Field mustard | cytosol | 50.2 | 51.03 |
| CDY35463 | Canola | cytosol | 50.61 | 51.02 |
| CDX77447 | Canola | cytosol | 49.8 | 50.94 |
| CDY24790 | Canola | cytosol | 50.2 | 50.61 |
| CDX69216 | Canola | cytosol | 49.39 | 50.52 |
| Bra010553.1-P | Field mustard | cytosol | 47.15 | 49.68 |
| TraesCS4A01G219900.1 | Wheat | cytosol, golgi, unclear | 45.94 | 46.99 |
| TraesCS5A01G113200.1 | Wheat | cytosol | 45.53 | 46.67 |
| CDY21568 | Canola | cytosol | 7.52 | 38.14 |
| CDY20864 | Canola | extracellular | 8.13 | 35.09 |
Protein Annotations
| Gene3D:3.40.309.10 | Gene3D:3.40.605.10 | MapMan:50.1.2 | InterPro:Ald_DH/histidinol_DH | InterPro:Ald_DH_C | InterPro:Ald_DH_N |
| InterPro:Aldehyde_DH_NAD(P) | InterPro:Aldehyde_DH_dom | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0006081 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016491 | GO:GO:0016620 | GO:GO:0055114 | InterPro:IPR016162 |
| InterPro:IPR016163 | PFAM:PF00171 | PIRSF:PIRSF036492 | PANTHER:PTHR43570 | PANTHER:PTHR43570:SF1 | SUPFAM:SSF53720 |
| EnsemblPlantsGene:TraesCS2A01G388900 | EnsemblPlants:TraesCS2A01G388900.1 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr2A:-:636922148..636926236
Molecular Weight (calculated)
54079.9 Da
IEP (calculated)
9.455
GRAVY (calculated)
0.083
Length
492 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSMATSVEE IGAAVAPQAV ERRLGELRAT FESGRTRPLS WRQSQLRGLL RLLADKEEEA FRALHDDLGK HRAEAYRDEV GVLTKSANAA LREIGKWAAP
101: EKVWVPLVAF PASAQVVPEP LGVVLIFSCW NFPLGLSLEP LIGAIAAGNA VALKPSELAP ATARFLEENI GEYLDATAVK VIQGGPAVGE QLMEHRWDKV
201: LFTGCPRVAR VVMAAAAKHL TPVALELGGK CPCIFDAVAG RRNLQTSVNR VIFAKWSSCA GQACIAIDYV LVEERFAPTL IKVLKSTLKR FIADSDQMAR
301: IVNGRHFQRL SNLLKDPAVA ASVLHGGGLD AKNLSIEPTI LLNPPLDSAI MTEEIFGPLL PIITVKKIED SIAFVRARPK PLAVYAFTDS APLKRRIVEE
401: TSSGSVTFND AVVQFGVDTL PFGGVGQSGF GQYHGKYSFE MFSHKKAVLR RGFLVEAMLR YPPWDEQKIA MMRHLFRYDY VRFIFTFLGL RR
101: EKVWVPLVAF PASAQVVPEP LGVVLIFSCW NFPLGLSLEP LIGAIAAGNA VALKPSELAP ATARFLEENI GEYLDATAVK VIQGGPAVGE QLMEHRWDKV
201: LFTGCPRVAR VVMAAAAKHL TPVALELGGK CPCIFDAVAG RRNLQTSVNR VIFAKWSSCA GQACIAIDYV LVEERFAPTL IKVLKSTLKR FIADSDQMAR
301: IVNGRHFQRL SNLLKDPAVA ASVLHGGGLD AKNLSIEPTI LLNPPLDSAI MTEEIFGPLL PIITVKKIED SIAFVRARPK PLAVYAFTDS APLKRRIVEE
401: TSSGSVTFND AVVQFGVDTL PFGGVGQSGF GQYHGKYSFE MFSHKKAVLR RGFLVEAMLR YPPWDEQKIA MMRHLFRYDY VRFIFTFLGL RR
001: MEAMKETVEE SLREMRETFA SGRTRSLKWR KAQIGAIYEM VKDNEDKICN ALFQDLGKHS TEAFRDELGV VLRTATVAIN CLDKWAVPKH SKLPLLFYPA
101: KGKVISEPYG TVLVLSSWNF PISLSLDPLI GAIAAGNTVL LKSSELSPNA SAFLAKTIPA YLDTKAIKVI EGGPDVATIL LQHQWDKIFF TGSPKIGRII
201: MAAAAQHLTP VTLELGGKCP TIVDHHTISK NIKSVVKRIA GGKWGSCNGQ ACISVDYVLI EKSFAPTLID MLKPTIKSFF GENPKESGCL SRIANKHHVQ
301: RLSRLLSDPR VQASIVYGGS IDEDKLYVEP TILLDPPLDS EIMNEEIFGP ILPIITVRDI QESIGIINTK PKPLAIYAFT NDENLKTRIL SETSSGSVTF
401: NDVMIQYMCD ALPFGGVGES GIGRYHGKYS FDCFSHEKAI MEGSLGMDLE ARYPPWNNFK LTFIRLAFRE AYFKLILLML GLKR
101: KGKVISEPYG TVLVLSSWNF PISLSLDPLI GAIAAGNTVL LKSSELSPNA SAFLAKTIPA YLDTKAIKVI EGGPDVATIL LQHQWDKIFF TGSPKIGRII
201: MAAAAQHLTP VTLELGGKCP TIVDHHTISK NIKSVVKRIA GGKWGSCNGQ ACISVDYVLI EKSFAPTLID MLKPTIKSFF GENPKESGCL SRIANKHHVQ
301: RLSRLLSDPR VQASIVYGGS IDEDKLYVEP TILLDPPLDS EIMNEEIFGP ILPIITVRDI QESIGIINTK PKPLAIYAFT NDENLKTRIL SETSSGSVTF
401: NDVMIQYMCD ALPFGGVGES GIGRYHGKYS FDCFSHEKAI MEGSLGMDLE ARYPPWNNFK LTFIRLAFRE AYFKLILLML GLKR
Arabidopsis Description
ALDH3F1Aldehyde dehydrogenase [Source:UniProtKB/TrEMBL;Acc:A0A178UZB9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.