Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT4G14640.1 | Thale cress | cytosol | 90.07 | 90.07 |
| VIT_05s0020g04420.t01 | Wine grape | cytosol | 78.15 | 79.19 |
| KRH31638 | Soybean | cytosol | 78.15 | 78.67 |
| Solyc06g053930.2.1 | Tomato | cytosol | 77.48 | 78.52 |
| KRH69070 | Soybean | cytosol | 77.48 | 78.0 |
| PGSC0003DMT400042062 | Potato | cytosol | 77.48 | 78.0 |
| CDY34215 | Canola | cytosol | 80.13 | 77.56 |
| CDX92965 | Canola | cytosol | 77.48 | 75.97 |
| CDY10686 | Canola | cytosol | 77.48 | 75.48 |
| CDX94883 | Canola | cytosol | 53.64 | 72.97 |
| CDY10325 | Canola | cytosol | 53.64 | 71.68 |
| GSMUA_Achr4P22570_001 | Banana | cytosol | 70.2 | 71.62 |
| GSMUA_Achr1P04700_001 | Banana | cytosol | 70.2 | 71.62 |
| GSMUA_Achr2P12680_001 | Banana | cytosol | 69.54 | 70.95 |
| GSMUA_Achr6P24410_001 | Banana | cytosol | 69.54 | 70.47 |
| GSMUA_Achr1P27230_001 | Banana | cytosol | 68.21 | 69.59 |
| GSMUA_Achr7P01390_001 | Banana | cytosol | 68.21 | 69.59 |
| CDY65072 | Canola | cytosol | 68.21 | 69.13 |
| CDY04474 | Canola | cytosol | 66.89 | 67.79 |
| CDX99690 | Canola | cytosol | 66.89 | 67.79 |
| CDX96148 | Canola | cytosol | 66.89 | 67.79 |
| CDY56411 | Canola | cytosol | 66.89 | 67.79 |
| CDY40824 | Canola | cytosol | 80.13 | 67.22 |
| CDY55678 | Canola | cytosol | 66.23 | 67.11 |
| CDY12321 | Canola | cytosol | 64.24 | 66.9 |
| GSMUA_Achr5P09010_001 | Banana | cytosol | 65.56 | 66.89 |
| PGSC0003DMT400034833 | Potato | cytosol | 67.55 | 66.67 |
| CDY27651 | Canola | cytosol | 66.23 | 66.67 |
| CDX92401 | Canola | cytosol | 58.94 | 66.42 |
| Solyc03g005240.1.1 | Tomato | cytosol | 65.56 | 64.71 |
| CDX75970 | Canola | cytosol | 45.7 | 60.53 |
| Os03t0743500-02 | Rice | nucleus | 60.26 | 59.09 |
| KXG37587 | Sorghum | cytosol | 58.94 | 57.79 |
| CDY48191 | Canola | cytosol | 66.89 | 56.42 |
| CDX77060 | Canola | cytosol | 66.89 | 56.11 |
| CDY30947 | Canola | cytosol | 66.89 | 48.33 |
| CDY57144 | Canola | cytosol | 46.36 | 47.95 |
| GSMUA_Achr3P25390_001 | Banana | cytosol | 57.62 | 47.54 |
| Zm00001d033980_P001 | Maize | cytosol | 49.01 | 47.13 |
| TraesCS5A01G382800.2 | Wheat | plastid | 56.95 | 45.99 |
| CDY21220 | Canola | cytosol | 66.23 | 45.25 |
| GSMUA_Achr1P14070_001 | Banana | cytosol | 61.59 | 41.15 |
| CDX98074 | Canola | cytosol | 35.76 | 36.49 |
| CDY21044 | Canola | cytosol | 35.76 | 36.49 |
| CDY30070 | Canola | cytosol | 35.76 | 36.49 |
| CDY31259 | Canola | cytosol | 35.76 | 36.49 |
| CDY26556 | Canola | cytosol | 35.1 | 35.81 |
| CDY15991 | Canola | cytosol | 35.1 | 35.81 |
| CDY61824 | Canola | cytosol | 39.07 | 35.54 |
| CDY54677 | Canola | cytosol | 39.07 | 35.54 |
| CDY58544 | Canola | cytosol | 39.74 | 35.5 |
| CDY59874 | Canola | cytosol | 35.76 | 33.54 |
| CDX75623 | Canola | extracellular | 39.74 | 33.33 |
| CDY26151 | Canola | cytosol | 34.44 | 33.12 |
| CDY04172 | Canola | cytosol | 35.1 | 32.92 |
| CDY48076 | Canola | cytosol | 35.1 | 32.72 |
| CDY51605 | Canola | cytosol | 35.1 | 32.72 |
| CDY21702 | Canola | cytosol | 33.77 | 32.69 |
| CDX81878 | Canola | cytosol | 33.77 | 32.69 |
| CDY19221 | Canola | cytosol | 33.77 | 32.48 |
| CDX83123 | Canola | golgi | 39.74 | 31.41 |
| CDY62753 | Canola | cytosol | 40.4 | 30.5 |
| KXG37588 | Sorghum | mitochondrion, nucleus | 0.66 | 0.73 |
Protein Annotations
| Gene3D:1.10.238.10 | MapMan:35.1 | GO:A0A078F447 | EnsemblPlants:CDY06478 | ProteinID:CDY06478 | ProteinID:CDY06478.1 |
| InterPro:EF-hand-dom_pair | InterPro:EF_Hand_1_Ca_BS | InterPro:EF_hand_dom | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005509 |
| GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0019722 | EnsemblPlantsGene:GSBRNA2T00122557001 |
| InterPro:IPR002048 | PFAM:PF13499 | ScanProsite:PS00018 | PFscan:PS50222 | PANTHER:PTHR23050 | PANTHER:PTHR23050:SF336 |
| SMART:SM00054 | SUPFAM:SSF47473 | UniParc:UPI0004EEE6F7 | : | : | : |
Description
BnaC06g11660DCalmodulin-like protein 8 [Source:Projected from Arabidopsis thaliana (AT4G14640) UniProtKB/Swiss-Prot;Acc:O23320]
Coordinates
chrLK031970:+:639742..642321
Molecular Weight (calculated)
17076.0 Da
IEP (calculated)
3.886
GRAVY (calculated)
-0.350
Length
151 amino acids
Sequence
(BLAST)
(BLAST)
001: MEKIALTKDE IIGFKEAFCL FDKDGDGCIT VEDLAIVIRS LDQHPTEQEF QDIITEIDSD GNGTIEFAEF LNLMAKKLQE SDAEEELKEV FKVFDKDQNG
101: YISASELSHV MINLGEKLTD EEAEQMIKEA DLDGDGHVNY DEFVKMMINI G
101: YISASELSHV MINLGEKLTD EEAEQMIKEA DLDGDGHVNY DEFVKMMINI G
001: MEETALTKDQ ITEFKEAFCL FDKDGDGCIT VEELATVIRS LDQNPTEQEL HDIITEIDSD SNGTIEFAEF LNLMAKKLQE SDAEEELKEA FKVFDKDQNG
101: YISASELSHV MINLGEKLTD EEVEQMIKEA DLDGDGQVNY DEFVKMMINI D
101: YISASELSHV MINLGEKLTD EEVEQMIKEA DLDGDGQVNY DEFVKMMINI D
Arabidopsis Description
CML8Calmodulin-like protein 8 [Source:UniProtKB/Swiss-Prot;Acc:O23320]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.