Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 6
- cytosol 1
- nucleus 1
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX92140 | Canola | nucleus, plastid | 96.13 | 94.3 |
| CDX82361 | Canola | cytosol, plastid | 85.16 | 84.08 |
| CDY71609 | Canola | nucleus, plastid | 84.52 | 83.44 |
| AT3G17600.1 | Thale cress | nucleus, plastid | 84.52 | 82.91 |
| CDY46895 | Canola | cytosol | 36.13 | 77.78 |
| CDY46058 | Canola | plastid | 67.1 | 62.28 |
| GSMUA_Achr8P29850_001 | Banana | nucleus | 54.19 | 47.73 |
| Os01t0286900-01 | Rice | nucleus | 33.55 | 45.22 |
| GSMUA_Achr9P16800_001 | Banana | nucleus | 48.39 | 43.1 |
| EES00605 | Sorghum | nucleus, plastid | 50.97 | 40.93 |
| Zm00001d040541_P001 | Maize | nucleus, plastid | 45.16 | 38.67 |
| CDY25089 | Canola | plastid | 40.0 | 35.84 |
| CDY27511 | Canola | cytosol, plastid | 40.0 | 35.63 |
| CDY48005 | Canola | cytosol, plastid | 40.0 | 35.63 |
| CDY58757 | Canola | plastid | 39.35 | 35.47 |
| CDX67874 | Canola | plastid | 39.35 | 35.26 |
| CDY11402 | Canola | plastid | 39.35 | 34.46 |
| Zm00001d008201_P001 | Maize | cytosol | 27.1 | 32.31 |
| TraesCS1D01G084100.1 | Wheat | nucleus, plastid | 41.29 | 30.92 |
| Os02t0723400-02 | Rice | nucleus | 39.35 | 29.76 |
| HORVU1Hr1G017770.6 | Barley | cytosol, mitochondrion, vacuole | 38.71 | 28.99 |
| CDY51701 | Canola | nucleus | 37.42 | 28.86 |
| TraesCS1B01G100300.1 | Wheat | plastid | 42.58 | 27.85 |
| TraesCS1A01G082700.2 | Wheat | plastid | 43.87 | 25.86 |
| CDX88204 | Canola | cytosol, nucleus, peroxisome | 27.74 | 24.71 |
| CDX80545 | Canola | cytosol, nucleus, plastid | 27.74 | 24.71 |
| CDX87072 | Canola | cytosol | 27.1 | 24.0 |
| CDY38374 | Canola | nucleus | 36.77 | 23.95 |
| CDY35203 | Canola | nucleus | 36.77 | 23.46 |
| CDY18205 | Canola | cytosol, nucleus, plastid | 39.35 | 22.51 |
| CDX89844 | Canola | cytosol, nucleus, plastid | 38.71 | 22.14 |
| CDY19477 | Canola | nucleus | 33.55 | 22.13 |
| CDY17158 | Canola | nucleus | 33.55 | 22.03 |
| CDY53196 | Canola | nucleus | 31.61 | 21.59 |
| CDY19790 | Canola | cytosol | 27.1 | 21.54 |
| CDX84693 | Canola | nucleus | 33.55 | 21.49 |
| CDX89814 | Canola | nucleus | 32.26 | 21.28 |
| CDY18243 | Canola | nucleus | 31.61 | 21.21 |
| CDX79522 | Canola | nucleus | 33.55 | 21.14 |
| CDY59182 | Canola | nucleus | 30.32 | 20.89 |
| CDX68829 | Canola | nucleus | 29.03 | 19.74 |
| CDX75231 | Canola | nucleus | 28.39 | 19.05 |
| CDY33844 | Canola | nucleus | 30.97 | 18.97 |
| CDY22876 | Canola | nucleus | 30.97 | 18.97 |
| CDX87863 | Canola | nucleus | 30.97 | 18.9 |
| CDY46538 | Canola | nucleus | 31.61 | 18.15 |
| CDY53439 | Canola | nucleus | 31.61 | 17.95 |
| CDY13478 | Canola | nucleus | 26.45 | 16.87 |
| CDY34957 | Canola | nucleus | 29.03 | 16.73 |
| CDX72351 | Canola | nucleus | 26.45 | 16.6 |
| CDY43104 | Canola | nucleus | 28.39 | 16.48 |
| CDY64626 | Canola | cytosol | 28.39 | 16.36 |
| CDX82399 | Canola | nucleus | 28.39 | 16.18 |
| CDX75884 | Canola | cytosol | 27.74 | 15.87 |
| CDX92077 | Canola | nucleus | 28.39 | 15.44 |
| CDX92888 | Canola | nucleus | 37.42 | 14.32 |
Protein Annotations
| Gene3D:3.10.20.90 | MapMan:35.1 | GO:A0A078E8W9 | InterPro:AUX/IAA_dom | InterPro:AUX_IAA | EnsemblPlants:CDX95843 |
| ProteinID:CDX95843 | ProteinID:CDX95843.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0007154 |
| GO:GO:0007165 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009719 | GO:GO:0009734 |
| GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00101791001 | InterPro:IPR000270 | InterPro:PB1_dom | PFAM:PF02309 | PFscan:PS51745 |
| PANTHER:PTHR31734 | PANTHER:PTHR31734:SF3 | SUPFAM:SSF54277 | UniParc:UPI0004EE88A0 | SEG:seg | : |
Description
BnaC05g35940D
Coordinates
chrLK031891:+:614197..615134
Molecular Weight (calculated)
17750.2 Da
IEP (calculated)
9.414
GRAVY (calculated)
-0.547
Length
155 amino acids
Sequence
(BLAST)
(BLAST)
001: MENSNSYSPY SSSSVDSTKP SLSVNLSLSL TFPSTSSQRA TSQDWPPIKP RLRDTLKSLR LRQRGYNTAL FIKVYMEGVP IGRKLDLSTF SGYESLLENL
101: SGMFDTSVIC GNRDRKHHVL TYQDKDGDWM MVGDIPWDMF LETVRRLKIT RPERC
101: SGMFDTSVIC GNRDRKHHVL TYQDKDGDWM MVGDIPWDMF LETVRRLKIT RPERC
001: MEVSNSCSSF SSSSVDSTKP SPSESSVNLS LSLTFPSTSP QREARQDWPP IKSRLRDTLK GRRLLRRGDD TSLFVKVYME GVPIGRKLDL CVFSGYESLL
101: ENLSHMFDTS IICGNRDRKH HVLTYEDKDG DWMMVGDIPW DMFLETVRRL KITRPERY
101: ENLSHMFDTS IICGNRDRKH HVLTYEDKDG DWMMVGDIPW DMFLETVRRL KITRPERY
Arabidopsis Description
IAA31Auxin-responsive protein [Source:UniProtKB/TrEMBL;Acc:A0A178V8S2]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.