Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY38374 | Canola | nucleus | 94.65 | 96.64 |
| Bra011045.1-P | Field mustard | nucleus | 96.3 | 96.3 |
| CDY51701 | Canola | nucleus | 71.6 | 86.57 |
| AT4G28640.2 | Thale cress | cytosol, nucleus, plastid | 80.66 | 64.9 |
| CDX92888 | Canola | nucleus | 76.95 | 46.17 |
| CDY19477 | Canola | nucleus | 43.21 | 44.68 |
| CDX84693 | Canola | nucleus | 44.44 | 44.63 |
| CDY17158 | Canola | nucleus | 43.21 | 44.49 |
| CDX79522 | Canola | nucleus | 44.86 | 44.31 |
| CDY53196 | Canola | nucleus | 40.74 | 43.61 |
| CDX89844 | Canola | cytosol, nucleus, plastid | 47.33 | 42.44 |
| CDY18205 | Canola | cytosol, nucleus, plastid | 47.33 | 42.44 |
| CDY18243 | Canola | nucleus | 40.33 | 42.42 |
| CDY59182 | Canola | nucleus | 38.68 | 41.78 |
| CDY46895 | Canola | cytosol | 12.35 | 41.67 |
| CDX89814 | Canola | nucleus | 39.92 | 41.28 |
| CDX87072 | Canola | cytosol | 27.16 | 37.71 |
| CDY71609 | Canola | nucleus, plastid | 23.87 | 36.94 |
| CDX95843 | Canola | plastid | 23.46 | 36.77 |
| CDX92140 | Canola | nucleus, plastid | 23.87 | 36.71 |
| CDX82361 | Canola | cytosol, plastid | 23.46 | 36.31 |
| CDY25089 | Canola | plastid | 25.51 | 35.84 |
| CDX80545 | Canola | cytosol, nucleus, plastid | 25.51 | 35.63 |
| CDX88204 | Canola | cytosol, nucleus, peroxisome | 25.51 | 35.63 |
| CDX67874 | Canola | plastid | 24.69 | 34.68 |
| CDY58757 | Canola | plastid | 23.46 | 33.14 |
| CDY19790 | Canola | cytosol | 26.34 | 32.82 |
| CDY48005 | Canola | cytosol, plastid | 23.05 | 32.18 |
| CDY11402 | Canola | plastid | 23.05 | 31.64 |
| CDY27511 | Canola | cytosol, plastid | 22.63 | 31.61 |
| CDY22876 | Canola | nucleus | 31.28 | 30.04 |
| CDY34957 | Canola | nucleus | 32.92 | 29.74 |
| CDY33844 | Canola | nucleus | 30.86 | 29.64 |
| CDY64626 | Canola | cytosol | 32.51 | 29.37 |
| CDX87863 | Canola | nucleus | 30.45 | 29.13 |
| CDY46538 | Canola | nucleus | 31.69 | 28.52 |
| CDY43104 | Canola | nucleus | 30.86 | 28.09 |
| CDX75884 | Canola | cytosol | 31.28 | 28.04 |
| CDX82399 | Canola | nucleus | 31.28 | 27.94 |
| CDY53439 | Canola | nucleus | 31.28 | 27.84 |
| CDY46058 | Canola | plastid | 18.93 | 27.54 |
| CDX92077 | Canola | nucleus | 31.28 | 26.67 |
| CDX75231 | Canola | nucleus | 22.63 | 23.81 |
| CDX68829 | Canola | nucleus | 21.81 | 23.25 |
| CDX72351 | Canola | nucleus | 21.81 | 21.46 |
| CDY13478 | Canola | nucleus | 21.4 | 21.4 |
Protein Annotations
| Gene3D:3.10.20.90 | MapMan:35.1 | GO:A0A078HEH5 | UniProt:A0A078HEH5 | InterPro:AUX/IAA_dom | InterPro:AUX_IAA |
| EnsemblPlants:CDY35203 | ProteinID:CDY35203 | ProteinID:CDY35203.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009719 | GO:GO:0009734 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00058109001 | InterPro:IPR000270 | InterPro:PB1_dom |
| PFAM:PF02309 | PFscan:PS51745 | PANTHER:PTHR31734 | PANTHER:PTHR31734:SF48 | SUPFAM:SSF54277 | UniParc:UPI0004EDB02D |
| SEG:seg | : | : | : | : | : |
Description
BnaA01g08280DAuxin-responsive protein [Source:UniProtKB/TrEMBL;Acc:A0A078HEH5]
Coordinates
chrLK032348:+:100056..101873
Molecular Weight (calculated)
26333.0 Da
IEP (calculated)
6.283
GRAVY (calculated)
-0.508
Length
243 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGGSASTLS NDDNLVVSSE DSSSPTENGL ELRLTLSLGR KGYRDCRASH ANDDSSSSSS SSPSSLSSRA SVTAGIKRTA DSMAPPTSGQ VVGWPPIRTY
101: RMNSMVNQAK TLAMEDPQQV NKNRTDAAQM RSSMFVKVTM DGIPIGRKID LNAHNCYESL SNALEDMFLK PNTVSSTQET DGHLETRLKI LPDGSSGLVL
201: TYEDKEGDWM LVGDVPWRMF IGSVKRLRIM KTSEATGAAK MNL
101: RMNSMVNQAK TLAMEDPQQV NKNRTDAAQM RSSMFVKVTM DGIPIGRKID LNAHNCYESL SNALEDMFLK PNTVSSTQET DGHLETRLKI LPDGSSGLVL
201: TYEDKEGDWM LVGDVPWRMF IGSVKRLRIM KTSEATGAAK MNL
001: MEGGSASGSA SALSNDENLV VSCEDSSSPI GNELELGLTL SLGRKGYRDC RVYADDSSSS SSSSSLSRAS VIAGIKRTAD SMAATSGQVV GWPPIRTYRM
101: NSMVNQAKAS ATEDPNLEIS QAVNKNRSDS TKMRNSMFVK VTMDGIPIGR KIDLNAHKCY ESLSNTLEEM FLKPKLGSRT LETDGHMETP VKILPDGSSG
201: LVLTYEDKEG DWMLVGDVPW GMFIGSVRRL RIMKTSEATG KAQMIL
101: NSMVNQAKAS ATEDPNLEIS QAVNKNRSDS TKMRNSMFVK VTMDGIPIGR KIDLNAHKCY ESLSNTLEEM FLKPKLGSRT LETDGHMETP VKILPDGSSG
201: LVLTYEDKEG DWMLVGDVPW GMFIGSVRRL RIMKTSEATG KAQMIL
Arabidopsis Description
IAA11Auxin-responsive protein [Source:UniProtKB/TrEMBL;Acc:A8MR39]
SUBAcon: [cytosol,nucleus,plastid]
SUBAcon: [cytosol,nucleus,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.