Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY19477 | Canola | nucleus | 98.73 | 99.15 |
| Bra005508.1-P | Field mustard | nucleus | 99.15 | 92.13 |
| AT2G33310.2 | Thale cress | nucleus | 93.64 | 89.47 |
| CDX79522 | Canola | nucleus | 91.95 | 88.21 |
| CDX84693 | Canola | nucleus | 90.25 | 88.02 |
| CDY59182 | Canola | nucleus | 69.92 | 73.33 |
| CDX89814 | Canola | nucleus | 72.46 | 72.77 |
| CDY53196 | Canola | nucleus | 69.92 | 72.69 |
| CDY18243 | Canola | nucleus | 70.34 | 71.86 |
| PGSC0003DMT400003784 | Potato | nucleus | 57.63 | 50.18 |
| CDY51701 | Canola | nucleus | 41.95 | 49.25 |
| Solyc09g090910.1.1 | Tomato | nucleus | 57.2 | 47.87 |
| PGSC0003DMT400075427 | Potato | nucleus | 46.61 | 47.41 |
| Solyc12g096980.1.1 | Tomato | nucleus | 46.61 | 47.21 |
| VIT_05s0049g01970.t01 | Wine grape | nucleus | 61.86 | 45.48 |
| CDY38374 | Canola | nucleus | 44.49 | 44.12 |
| CDY35203 | Canola | nucleus | 44.49 | 43.21 |
| CDY46895 | Canola | cytosol | 12.29 | 40.28 |
| CDX87072 | Canola | cytosol | 27.54 | 37.14 |
| CDX88204 | Canola | cytosol, nucleus, peroxisome | 25.85 | 35.06 |
| CDX80545 | Canola | cytosol, nucleus, plastid | 25.42 | 34.48 |
| CDX89844 | Canola | cytosol, nucleus, plastid | 39.41 | 34.32 |
| CDY18205 | Canola | cytosol, nucleus, plastid | 38.98 | 33.95 |
| CDX95843 | Canola | plastid | 22.03 | 33.55 |
| CDY71609 | Canola | nucleus, plastid | 21.61 | 32.48 |
| CDY22876 | Canola | nucleus | 34.75 | 32.41 |
| CDY33844 | Canola | nucleus | 34.32 | 32.02 |
| CDX87863 | Canola | nucleus | 34.32 | 31.89 |
| CDX82361 | Canola | cytosol, plastid | 21.19 | 31.85 |
| CDY19790 | Canola | cytosol | 26.27 | 31.79 |
| CDX92140 | Canola | nucleus, plastid | 21.19 | 31.65 |
| CDY25089 | Canola | plastid | 22.46 | 30.64 |
| CDY46538 | Canola | nucleus | 34.75 | 30.37 |
| CDX67874 | Canola | plastid | 22.03 | 30.06 |
| CDY53439 | Canola | nucleus | 34.75 | 30.04 |
| CDY48005 | Canola | cytosol, plastid | 22.03 | 29.89 |
| CDY27511 | Canola | cytosol, plastid | 22.03 | 29.89 |
| CDY58757 | Canola | plastid | 21.19 | 29.07 |
| CDY34957 | Canola | nucleus | 33.05 | 29.0 |
| CDY64626 | Canola | cytosol | 33.05 | 29.0 |
| CDY43104 | Canola | nucleus | 32.63 | 28.84 |
| CDY11402 | Canola | plastid | 21.61 | 28.81 |
| CDX75884 | Canola | cytosol | 31.78 | 27.68 |
| CDX82399 | Canola | nucleus | 31.78 | 27.57 |
| CDX92077 | Canola | nucleus | 32.63 | 27.02 |
| CDX92888 | Canola | nucleus | 45.76 | 26.67 |
| CDX75231 | Canola | nucleus | 22.88 | 23.38 |
| CDX68829 | Canola | nucleus | 22.46 | 23.25 |
| CDY46058 | Canola | plastid | 16.1 | 22.75 |
| CDY13478 | Canola | nucleus | 22.46 | 21.81 |
| CDX72351 | Canola | nucleus | 22.46 | 21.46 |
Protein Annotations
| Gene3D:3.10.20.90 | MapMan:35.1 | GO:A0A078FXS0 | UniProt:A0A078FXS0 | InterPro:AUX/IAA_dom | InterPro:AUX_IAA |
| EnsemblPlants:CDY17158 | ProteinID:CDY17158 | ProteinID:CDY17158.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009719 | GO:GO:0009734 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00095219001 | InterPro:IPR000270 | InterPro:PB1_dom |
| PFAM:PF02309 | PFscan:PS51745 | PANTHER:PTHR31734 | PANTHER:PTHR31734:SF6 | SUPFAM:SSF54277 | UniParc:UPI0004EF259F |
| SEG:seg | : | : | : | : | : |
Description
BnaA05g10300DAuxin-responsive protein [Source:UniProtKB/TrEMBL;Acc:A0A078FXS0]
Coordinates
chrLK032071:-:237178..238758
Molecular Weight (calculated)
25515.4 Da
IEP (calculated)
9.703
GRAVY (calculated)
-0.564
Length
236 amino acids
Sequence
(BLAST)
(BLAST)
001: MISELEMEKA ESELELGLGL SLGGGTAAKI GKPGGGGAWG ERGRLLTAKD FPSVGSKRAA DSASHAGASP PRSSQVVGWP PIGSHRMNSL AAKSAREEEG
101: EAGKKKVKDD ETKDVNKKVQ VGFIKVNMDG VAIGRKVDLN AHSSYENLAQ TLEDMFFRGN PGTIGLTGQF TKPLRLLDGS SEFVLTYEDK EGDWMLVGDV
201: PWRMFITSVK RLRVMKTSEA NGLAARHQES NERQRK
101: EAGKKKVKDD ETKDVNKKVQ VGFIKVNMDG VAIGRKVDLN AHSSYENLAQ TLEDMFFRGN PGTIGLTGQF TKPLRLLDGS SEFVLTYEDK EGDWMLVGDV
201: PWRMFITSVK RLRVMKTSEA NGLAARHQES NERQRK
001: MITELEMGKG ESELELGLGL SLGGGTAAKI GKSGGGGAWG ERGRLLTAKD FPSVGSKRAA DSASHAGSSP PRSSQVVGWP PIGSHRMNSL VNNQATKSAR
101: EEEEAGKKKV KDDEPKDVTK KVNGKVQVGF IKVNMDGVAI GRKVDLNAHS SYENLAQTLE DMFFRTNPGT VGLTSQFTKP LRLLDGSSEF VLTYEDKEGD
201: WMLVGDVPWR MFINSVKRLR VMKTSEANGL AARNQEPNER QRKQPV
101: EEEEAGKKKV KDDEPKDVTK KVNGKVQVGF IKVNMDGVAI GRKVDLNAHS SYENLAQTLE DMFFRTNPGT VGLTSQFTKP LRLLDGSSEF VLTYEDKEGD
201: WMLVGDVPWR MFINSVKRLR VMKTSEANGL AARNQEPNER QRKQPV
Arabidopsis Description
IAA13Auxin-responsive protein IAA13 [Source:UniProtKB/Swiss-Prot;Acc:Q38831]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.