Factsheet for AT2G33310.2

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY19477	Canola	nucleus	90.28	94.89
CDY17158	Canola	nucleus	89.47	93.64
CDX79522	Canola	nucleus	91.09	91.46
CDX84693	Canola	nucleus	89.47	91.32
Bra022934.1-P	Field mustard	nucleus	89.47	91.32
Bra005508.1-P	Field mustard	nucleus	89.88	87.4
AT1G04550.2	Thale cress	cytosol	73.28	75.73
PGSC0003DMT400003784	Potato	nucleus	58.3	53.14
Solyc09g090910.1.1	Tomato	nucleus	57.89	50.71
PGSC0003DMT400075427	Potato	nucleus	46.56	49.57
Solyc12g096980.1.1	Tomato	nucleus	46.15	48.93
VIT_05s0049g01970.t01	Wine grape	nucleus	61.13	47.04
AT5G25890.1	Thale cress	nucleus	25.91	36.57
AT1G04100.1	Thale cress	cytosol	38.06	36.02
AT4G28640.2	Thale cress	cytosol, nucleus, plastid	43.72	35.76
AT3G17600.1	Thale cress	nucleus, plastid	21.05	32.91
AT1G51950.1	Thale cress	nucleus	33.6	31.09
AT3G62100.1	Thale cress	plastid	21.05	30.23
AT3G16500.1	Thale cress	nucleus	32.79	30.11
AT2G46990.1	Thale cress	plastid	20.65	29.14
AT4G32280.1	Thale cress	cytosol	22.27	21.91

Protein Annotations

Gene3D:3.10.20.90	MapMan:35.1	EntrezGene:817894	ProteinID:AAB80649.1	ProteinID:AEC08812.1	ProteinID:AEC08813.1
ProteinID:AEC08814.1	EMBL:AF332399	EMBL:AK227387	ArrayExpress:AT2G33310	EnsemblPlantsGene:AT2G33310	RefSeq:AT2G33310
TAIR:AT2G33310	RefSeq:AT2G33310-TAIR-G	EnsemblPlants:AT2G33310.2	TAIR:AT2G33310.2	InterPro:AUX/IAA_dom	InterPro:AUX_IAA
EMBL:AY085194	Unigene:At.10797	EMBL:BT005874	GO:GO:0003674	GO:GO:0003700	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009719	GO:GO:0009733	GO:GO:0009734	GO:GO:0009987	Symbol:IAA13
InterPro:IPR000270	RefSeq:NP_001118434.1	RefSeq:NP_180889.1	RefSeq:NP_850205.1	InterPro:PB1_dom	PFAM:PF02309
PO:PO:0000013	PO:PO:0000037	PO:PO:0000230	PO:PO:0000293	PO:PO:0001054	PO:PO:0001078
PO:PO:0001081	PO:PO:0001185	PO:PO:0004507	PO:PO:0007064	PO:PO:0007095	PO:PO:0007098
PO:PO:0007103	PO:PO:0007115	PO:PO:0007123	PO:PO:0007611	PO:PO:0007616	PO:PO:0008019
PO:PO:0009005	PO:PO:0009006	PO:PO:0009009	PO:PO:0009010	PO:PO:0009025	PO:PO:0009029
PO:PO:0009030	PO:PO:0009031	PO:PO:0009032	PO:PO:0009046	PO:PO:0009047	PO:PO:0009052
PO:PO:0020030	PO:PO:0020038	PO:PO:0020100	PO:PO:0020137	PO:PO:0025022	PO:PO:0025281
PFscan:PS51745	PANTHER:PTHR31734	PANTHER:PTHR31734:SF6	UniProt:Q0WU05	UniProt:Q38831	SUPFAM:SSF54277
EMBL:U18415	UniParc:UPI0000060D82	EMBL:Z26543	SEG:seg	:	:

Description

IAA13Auxin-responsive protein IAA13 [Source:UniProtKB/Swiss-Prot;Acc:Q38831]

Coordinates

chr2:-:14114281..14115969

Molecular Weight (calculated)

26730.8 Da

IEP (calculated)

10.032

GRAVY (calculated)

-0.610

Length

247 amino acids

Sequence
(BLAST)

001: MITELEMGKG ESELELGLGL SLGGGTAAKI GKSGGGGAWG ERGRLLTAKD FPSVGSKRAA DSASHAGSSP PRSSSQVVGW PPIGSHRMNS LVNNQATKSA
101: REEEEAGKKK VKDDEPKDVT KKVNGKVQVG FIKVNMDGVA IGRKVDLNAH SSYENLAQTL EDMFFRTNPG TVGLTSQFTK PLRLLDGSSE FVLTYEDKEG
201: DWMLVGDVPW RMFINSVKRL RVMKTSEANG LAARNQEPNE RQRKQPV

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.