Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 1
- golgi 1
- extracellular 1
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY13478 | Canola | nucleus | 73.31 | 75.72 |
| Bra023958.1-P | Field mustard | nucleus | 73.31 | 75.72 |
| CDX72351 | Canola | nucleus | 72.91 | 74.09 |
| CDX68829 | Canola | nucleus | 65.74 | 72.37 |
| CDX75231 | Canola | nucleus | 64.94 | 70.56 |
| Bra011332.1-P | Field mustard | nucleus | 64.94 | 70.56 |
| PGSC0003DMT400052767 | Potato | cytosol, extracellular, nucleus | 16.33 | 45.05 |
| TraesCS7D01G128200.1 | Wheat | cytosol, mitochondrion | 15.14 | 37.25 |
| KRH61758 | Soybean | nucleus | 33.07 | 36.73 |
| PGSC0003DMT400035770 | Potato | cytosol | 31.87 | 36.53 |
| KRH52428 | Soybean | nucleus | 32.67 | 36.12 |
| Solyc08g021820.2.1 | Tomato | nucleus | 31.47 | 34.8 |
| VIT_04s0008g05560.t01 | Wine grape | extracellular | 31.47 | 34.8 |
| TraesCS7A01G129000.1 | Wheat | nucleus | 11.16 | 34.15 |
| Solyc06g066020.2.1 | Tomato | cytoskeleton, cytosol, nucleus | 32.67 | 33.88 |
| TraesCS6D01G357500.1 | Wheat | cytosol, mitochondrion, nucleus | 22.71 | 33.14 |
| GSMUA_Achr9P26900_001 | Banana | plastid | 15.54 | 32.77 |
| HORVU6Hr1G088140.2 | Barley | cytosol, mitochondrion, nucleus | 22.71 | 32.76 |
| TraesCS6A01G373300.1 | Wheat | cytosol, nucleus, plastid | 22.71 | 32.57 |
| TraesCS7D01G127900.1 | Wheat | nucleus | 18.73 | 31.33 |
| TraesCS6B01G411000.1 | Wheat | cytosol, mitochondrion, nucleus | 21.91 | 31.07 |
| TraesCS7D01G128100.1 | Wheat | nucleus | 19.52 | 30.62 |
| KXG19391 | Sorghum | nucleus | 24.3 | 29.9 |
| Os02t0805100-01 | Rice | nucleus | 21.51 | 29.67 |
| GSMUA_Achr9P26910_001 | Banana | nucleus | 17.13 | 29.66 |
| TraesCS7D01G127800.1 | Wheat | cytosol | 18.33 | 29.11 |
| TraesCS7B01G029000.1 | Wheat | cytosol | 19.92 | 29.07 |
| KXG31308 | Sorghum | cytosol | 22.71 | 28.93 |
| HORVU7Hr1G026970.2 | Barley | cytosol | 19.12 | 28.57 |
| Zm00001d000288_P001 | Maize | cytosol | 22.31 | 28.43 |
| Os06t0166500-01 | Rice | nucleus | 20.72 | 28.42 |
| Zm00001d045203_P001 | Maize | cytosol | 23.51 | 27.31 |
| Zm00001d018414_P001 | Maize | nucleus | 21.91 | 26.7 |
| TraesCS7B01G029100.1 | Wheat | nucleus | 18.73 | 26.55 |
| AT3G62100.1 | Thale cress | plastid | 17.53 | 25.58 |
| AT3G17600.1 | Thale cress | nucleus, plastid | 15.94 | 25.32 |
| AT5G25890.1 | Thale cress | nucleus | 16.33 | 23.43 |
| AT2G46990.1 | Thale cress | plastid | 16.33 | 23.43 |
| AT1G04550.2 | Thale cress | cytosol | 21.51 | 22.59 |
| AT2G33310.2 | Thale cress | nucleus | 21.91 | 22.27 |
| AT1G04100.1 | Thale cress | cytosol | 21.12 | 20.31 |
| AT3G16500.1 | Thale cress | nucleus | 19.92 | 18.59 |
| AT4G28640.2 | Thale cress | cytosol, nucleus, plastid | 22.31 | 18.54 |
| AT1G51950.1 | Thale cress | nucleus | 19.52 | 18.35 |
Protein Annotations
| Gene3D:3.10.20.90 | MapMan:35.1 | EntrezGene:829361 | EMBL:AB493715 | EMBL:AB493716 | ProteinID:AEE86032.1 |
| EMBL:AF380646 | EMBL:AK229689 | ArrayExpress:AT4G32280 | EnsemblPlantsGene:AT4G32280 | RefSeq:AT4G32280 | TAIR:AT4G32280 |
| RefSeq:AT4G32280-TAIR-G | EnsemblPlants:AT4G32280.1 | TAIR:AT4G32280.1 | InterPro:AUX/IAA_dom | InterPro:AUX_IAA | EMBL:AY054137 |
| EMBL:AY669800 | ProteinID:CAA16962.1 | ProteinID:CAB79946.1 | GO:GO:0003674 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009628 | GO:GO:0009719 | GO:GO:0009733 | GO:GO:0009734 | GO:GO:0009987 |
| GO:GO:0010114 | GO:GO:0010218 | Symbol:IAA29 | InterPro:IPR000270 | RefSeq:NP_567891.1 | InterPro:PB1_dom |
| PFAM:PF02309 | PO:PO:0000013 | PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 |
| PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0009025 |
| PO:PO:0009046 | PO:PO:0009047 | PO:PO:0025022 | PO:PO:0025034 | PFscan:PS51745 | PANTHER:PTHR31734 |
| PANTHER:PTHR31734:SF44 | UniProt:Q2VWA0 | UniProt:Q93WC4 | SUPFAM:SSF54277 | UniParc:UPI0000162B66 | SEG:seg |
Description
IAA29Auxin-responsive protein [Source:UniProtKB/TrEMBL;Acc:Q2VWA0]
Coordinates
chr4:+:15583332..15584898
Molecular Weight (calculated)
28611.6 Da
IEP (calculated)
6.281
GRAVY (calculated)
-0.560
Length
251 amino acids
Sequence
(BLAST)
(BLAST)
001: MELDLGLSLS PHKSSKLGFN FDLNKHCAIE GAASCLGTEK LRFEATFGLG NVEENCYMPK QRLFALNGQP NEEDEDPLES ESSIVYDDEE ENSEVVGWPP
101: VKTCMIKYGS YHHRHIRNHH HCPYHHRGRR ITAMNNNISN PTTATVGSSS SSSISSRSSM YVKVKMDGVA IARKVDIKLF NSYESLTNSL ITMFTEYEDC
201: DREDTNYTFT FQGKEGDWLL RGDVTWKIFA ESVHRISIIR DRPCAYTRCL F
101: VKTCMIKYGS YHHRHIRNHH HCPYHHRGRR ITAMNNNISN PTTATVGSSS SSSISSRSSM YVKVKMDGVA IARKVDIKLF NSYESLTNSL ITMFTEYEDC
201: DREDTNYTFT FQGKEGDWLL RGDVTWKIFA ESVHRISIIR DRPCAYTRCL F
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.