Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY64626 | Canola | cytosol | 84.76 | 84.76 |
| CDY34957 | Canola | nucleus | 84.01 | 84.01 |
| Bra021184.1-P | Field mustard | nucleus | 84.01 | 84.01 |
| CDY43104 | Canola | nucleus | 82.53 | 83.15 |
| CDX75884 | Canola | cytosol | 81.04 | 80.44 |
| CDX82399 | Canola | nucleus | 80.3 | 79.41 |
| Bra001634.1-P | Field mustard | nucleus | 80.3 | 79.41 |
| CDX92077 | Canola | nucleus | 81.04 | 76.49 |
| Bra022164.1-P | Field mustard | nucleus | 81.04 | 76.49 |
| AT1G51950.1 | Thale cress | nucleus | 67.29 | 67.79 |
| AT5G25890.1 | Thale cress | nucleus | 32.34 | 49.71 |
| TraesCS1A01G122600.2 | Wheat | nucleus | 39.03 | 46.67 |
| TraesCS1D01G123500.1 | Wheat | nucleus | 39.03 | 46.26 |
| KRH09948 | Soybean | nucleus | 54.28 | 45.62 |
| GSMUA_Achr3P16300_001 | Banana | endoplasmic reticulum, golgi, mitochondrion, plastid | 37.55 | 44.3 |
| Solyc03g121060.2.1 | Tomato | nucleus | 46.47 | 43.55 |
| PGSC0003DMT400006709 | Potato | nucleus | 45.72 | 43.46 |
| Os01t0190300-01 | Rice | nucleus | 38.29 | 43.28 |
| Zm00001d010360_P001 | Maize | cytosol, nucleus | 36.06 | 42.54 |
| KRH23388 | Soybean | nucleus | 54.28 | 42.2 |
| EES17832 | Sorghum | nucleus | 37.55 | 41.74 |
| TraesCS3B01G127400.1 | Wheat | nucleus | 35.32 | 41.3 |
| TraesCS3D01G110200.1 | Wheat | nucleus | 35.32 | 41.3 |
| HORVU1Hr1G028170.4 | Barley | cytosol, nucleus, plastid | 37.92 | 41.3 |
| Zm00001d039513_P001 | Maize | cytosol, nucleus, plastid | 34.57 | 40.61 |
| GSMUA_Achr5P09310_001 | Banana | endoplasmic reticulum | 35.32 | 40.43 |
| Zm00001d037691_P003 | Maize | cytosol, nucleus | 36.43 | 39.68 |
| GSMUA_AchrUn_... | Banana | nucleus | 44.98 | 39.29 |
| Os02t0228900-01 | Rice | nucleus | 43.12 | 38.67 |
| TraesCS3A01G108400.1 | Wheat | cytosol, nucleus, peroxisome | 36.06 | 38.49 |
| HORVU3Hr1G019750.4 | Barley | cytosol, nucleus, plastid | 34.57 | 37.96 |
| KRH47203 | Soybean | nucleus | 44.24 | 37.54 |
| KRH44271 | Soybean | nucleus | 43.49 | 37.38 |
| OQU84670 | Sorghum | nucleus | 39.41 | 36.3 |
| Zm00001d016277_P002 | Maize | nucleus | 39.41 | 35.45 |
| TraesCS1B01G356600.1 | Wheat | cytosol | 37.55 | 34.01 |
| Os01t0741900-01 | Rice | nucleus | 42.01 | 33.73 |
| GSMUA_Achr7P13680_001 | Banana | nucleus | 45.72 | 33.52 |
| VIT_09s0002g03410.t01 | Wine grape | nucleus | 54.65 | 33.49 |
| Os05t0523300-01 | Rice | nucleus | 40.52 | 33.33 |
| TraesCS1D01G345400.1 | Wheat | nucleus | 36.43 | 33.22 |
| TraesCS3D01G276600.1 | Wheat | cytosol, mitochondrion, nucleus | 41.26 | 33.13 |
| TraesCS1A01G343300.1 | Wheat | nucleus | 36.06 | 32.99 |
| AT2G33310.2 | Thale cress | nucleus | 30.11 | 32.79 |
| AT1G04550.2 | Thale cress | cytosol | 29.0 | 32.64 |
| TraesCS3A01G276500.1 | Wheat | cytosol, mitochondrion, nucleus | 41.26 | 32.55 |
| TraesCS3B01G310500.1 | Wheat | cytosol, mitochondrion, nucleus | 41.26 | 32.36 |
| HORVU3Hr1G070620.5 | Barley | cytosol, mitochondrion, nucleus | 42.01 | 32.01 |
| AT3G17600.1 | Thale cress | nucleus, plastid | 18.22 | 31.01 |
| KXG33336 | Sorghum | nucleus | 42.01 | 30.96 |
| Zm00001d043515_P002 | Maize | cytosol, mitochondrion, nucleus | 40.89 | 30.81 |
| KXG22376 | Sorghum | nucleus | 38.66 | 30.14 |
| OQU86163 | Sorghum | golgi, plastid | 38.66 | 29.05 |
| Zm00001d038784_P001 | Maize | nucleus | 37.92 | 28.9 |
| AT1G04100.1 | Thale cress | cytosol | 26.02 | 26.82 |
| AT3G62100.1 | Thale cress | plastid | 16.73 | 26.16 |
| AT2G46990.1 | Thale cress | plastid | 16.36 | 25.14 |
| AT4G28640.2 | Thale cress | cytosol, nucleus, plastid | 26.77 | 23.84 |
| AT4G32280.1 | Thale cress | cytosol | 18.59 | 19.92 |
Protein Annotations
| MapMan:11.2.2.1.2 | Gene3D:3.10.20.90 | EntrezGene:820898 | ProteinID:AEE75827.1 | EMBL:AF088281 | EMBL:AF332394 |
| EMBL:AF332401 | EMBL:AF386948 | ArrayExpress:AT3G16500 | EnsemblPlantsGene:AT3G16500 | RefSeq:AT3G16500 | TAIR:AT3G16500 |
| RefSeq:AT3G16500-TAIR-G | EnsemblPlants:AT3G16500.1 | TAIR:AT3G16500.1 | InterPro:AUX/IAA_dom | InterPro:AUX_IAA | EMBL:AY072502 |
| EMBL:AY087745 | ProteinID:BAB01149.1 | GO:GO:0003674 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009719 | GO:GO:0009733 | GO:GO:0009734 | GO:GO:0009987 | InterPro:IPR000270 | RefSeq:NP_188271.1 |
| Symbol:PAP1 | InterPro:PB1_dom | PFAM:PF02309 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 |
| PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 |
| PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 |
| PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 |
| PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PFscan:PS51745 | PANTHER:PTHR31734 | PANTHER:PTHR31734:SF2 |
| UniProt:Q8LAL2 | SUPFAM:SSF54277 | UniParc:UPI00000A6100 | : | : | : |
Description
IAA26Auxin-responsive protein IAA26 [Source:UniProtKB/Swiss-Prot;Acc:Q8LAL2]
Coordinates
chr3:-:5612203..5614803
Molecular Weight (calculated)
30125.7 Da
IEP (calculated)
8.781
GRAVY (calculated)
-0.840
Length
269 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGCPRNREI GPKLLDLIPQ GRKWYQEDKN NTDQEKKLEL RLGPPGGDEE DHSAIKKKNT EIRNIKKETE DKSFHCFNGN HFSPSNKTTS VPHISQKRTA
101: PGPVVGWPPV RSFRKNLAST SSSKLGNESS HGGQINKSDD GEKQVETKKE GMFVKINMDG VPIGRKVDLN AYNSYEQLSF VVDKLFRGLL AAQRDISDGQ
201: GEEKPIIGLL DGKGEFTLTY EDNEGDKMLV GDVPWQMFVS SVKRLRVIKS SEISSALTFG CSKQEKMMH
101: PGPVVGWPPV RSFRKNLAST SSSKLGNESS HGGQINKSDD GEKQVETKKE GMFVKINMDG VPIGRKVDLN AYNSYEQLSF VVDKLFRGLL AAQRDISDGQ
201: GEEKPIIGLL DGKGEFTLTY EDNEGDKMLV GDVPWQMFVS SVKRLRVIKS SEISSALTFG CSKQEKMMH
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.