Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G310500.1 | Wheat | cytosol, mitochondrion, nucleus | 73.43 | 71.72 |
| TraesCS3D01G276600.1 | Wheat | cytosol, mitochondrion, nucleus | 71.34 | 71.34 |
| TraesCS3A01G276500.1 | Wheat | cytosol, mitochondrion, nucleus | 71.64 | 70.38 |
| HORVU3Hr1G070620.5 | Barley | cytosol, mitochondrion, nucleus | 69.55 | 66.01 |
| KXG33336 | Sorghum | nucleus | 64.18 | 58.9 |
| Zm00001d043515_P002 | Maize | cytosol, mitochondrion, nucleus | 61.49 | 57.7 |
| Os05t0523300-01 | Rice | nucleus | 55.22 | 56.57 |
| CDX87072 | Canola | cytosol | 24.78 | 47.43 |
| CDX80545 | Canola | cytosol, nucleus, plastid | 24.48 | 47.13 |
| CDX88204 | Canola | cytosol, nucleus, peroxisome | 24.48 | 47.13 |
| Bra036557.1-P | Field mustard | nucleus | 24.48 | 46.86 |
| AT5G25890.1 | Thale cress | nucleus | 24.48 | 46.86 |
| Bra009867.1-P | Field mustard | cytosol | 24.48 | 46.59 |
| PGSC0003DMT400006709 | Potato | nucleus | 38.51 | 45.58 |
| Os01t0190300-01 | Rice | nucleus | 32.24 | 45.38 |
| Solyc03g121060.2.1 | Tomato | nucleus | 38.81 | 45.3 |
| KRH09948 | Soybean | nucleus | 40.9 | 42.81 |
| Bra021184.1-P | Field mustard | nucleus | 34.33 | 42.75 |
| CDY34957 | Canola | nucleus | 34.33 | 42.75 |
| CDY64626 | Canola | cytosol | 34.33 | 42.75 |
| CDY19790 | Canola | cytosol | 24.78 | 42.56 |
| CDX87863 | Canola | nucleus | 31.94 | 42.13 |
| AT3G16500.1 | Thale cress | nucleus | 33.73 | 42.01 |
| AT1G51950.1 | Thale cress | nucleus | 33.43 | 41.95 |
| Os02t0228900-01 | Rice | nucleus | 37.31 | 41.67 |
| CDY43104 | Canola | nucleus | 33.13 | 41.57 |
| VIT_04s0008g00220.t01 | Wine grape | nucleus | 42.39 | 41.16 |
| CDX75884 | Canola | cytosol | 33.13 | 40.96 |
| Bra001634.1-P | Field mustard | nucleus | 32.54 | 40.07 |
| CDX82399 | Canola | nucleus | 32.54 | 40.07 |
| Bra014303.1-P | Field mustard | nucleus | 31.94 | 39.63 |
| KRH23388 | Soybean | nucleus | 40.6 | 39.31 |
| CDY46538 | Canola | nucleus | 31.64 | 39.26 |
| GSMUA_AchrUn_... | Banana | nucleus | 35.82 | 38.96 |
| CDY22876 | Canola | nucleus | 29.25 | 38.74 |
| CDY33844 | Canola | nucleus | 29.25 | 38.74 |
| Bra018938.1-P | Field mustard | nucleus | 29.25 | 38.74 |
| CDX92077 | Canola | nucleus | 32.84 | 38.6 |
| Bra022164.1-P | Field mustard | nucleus | 32.84 | 38.6 |
| CDY53439 | Canola | nucleus | 31.34 | 38.46 |
| KRH47203 | Soybean | nucleus | 35.52 | 37.54 |
| KRH44271 | Soybean | nucleus | 34.93 | 37.38 |
| GSMUA_Achr7P13680_001 | Banana | nucleus | 40.3 | 36.78 |
| Os01t0286900-01 | Rice | nucleus | 11.34 | 33.04 |
| VIT_09s0002g03410.t01 | Wine grape | nucleus | 42.69 | 32.57 |
| Os08t0109400-01 | Rice | nucleus | 20.6 | 28.05 |
| Os02t0805100-01 | Rice | nucleus | 14.03 | 25.82 |
| Os06t0166500-01 | Rice | nucleus | 13.73 | 25.14 |
| Os02t0817600-02 | Rice | nucleus | 20.9 | 24.91 |
| Os02t0723400-02 | Rice | nucleus | 13.13 | 21.46 |
| Os11t0221000-01 | Rice | nucleus | 15.82 | 18.4 |
Protein Annotations
| MapMan:11.2.2.1.2 | Gene3D:3.10.20.90 | EntrezGene:4326541 | EMBL:AK068600 | InterPro:AUX/IAA_dom | InterPro:AUX_IAA |
| ProteinID:BAB91924.1 | ProteinID:BAF06122.1 | ProteinID:BAS74279.1 | ProteinID:EAZ13489.1 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0006412 | GO:GO:0006417 | GO:GO:0007154 | GO:GO:0007165 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009719 | GO:GO:0009733 | GO:GO:0009734 |
| GO:GO:0009987 | GO:GO:0019538 | InterPro:IPR000270 | EnsemblPlantsGene:Os01g0741900 | EnsemblPlants:Os01t0741900-01 | InterPro:PB1_dom |
| PFAM:PF02309 | PFscan:PS51745 | PANTHER:PTHR31734 | PANTHER:PTHR31734:SF90 | UniProt:Q8LQ74 | SUPFAM:SSF54277 |
| UniParc:UPI000009F3E9 | RefSeq:XP_015619920.1 | SEG:seg | : | : | : |
Description
IAA6Auxin-responsive protein, Drought tolerance, Control of tiller outgrowth (Os01t0741900-01)
Coordinates
chr1:+:30975765..30979337
Molecular Weight (calculated)
36708.3 Da
IEP (calculated)
7.962
GRAVY (calculated)
-0.687
Length
335 amino acids
Sequence
(BLAST)
(BLAST)
001: MEEGSNKREG LPPQLLDLIP DEKEWKLREA LGLGRSRNAG FDGEEDKKLD LKLGLPGFIE DDEAETLRDY RLQQESPSLS LSFFPKHSKT TSSTTTTTGA
101: KRGFIDTVED KTEGYNDQKQ QARAGCGKEL AVEEMIAAVS ERKKGCCPPP PPPHGAPATP ARNRPQTQGR GAAAPVVGWP PIRSFRRNLA SSSSSKHSPE
201: PQNDNANAKV TLTCKKNPLV KINMDGIPIG RKIDLAAYNS YDGLSSAVKQ LFHGFLQAQK DQTNAQIAQQ GADDKIFYQL LDGSGEYTLV YEDSEGDRML
301: VGDVPWKVFV STAKRLRVLR SSELSHTLIG ATARV
101: KRGFIDTVED KTEGYNDQKQ QARAGCGKEL AVEEMIAAVS ERKKGCCPPP PPPHGAPATP ARNRPQTQGR GAAAPVVGWP PIRSFRRNLA SSSSSKHSPE
201: PQNDNANAKV TLTCKKNPLV KINMDGIPIG RKIDLAAYNS YDGLSSAVKQ LFHGFLQAQK DQTNAQIAQQ GADDKIFYQL LDGSGEYTLV YEDSEGDRML
301: VGDVPWKVFV STAKRLRVLR SSELSHTLIG ATARV
001: MEGCPRNREI GPKLLDLIPQ GRKWYQEDKN NTDQEKKLEL RLGPPGGDEE DHSAIKKKNT EIRNIKKETE DKSFHCFNGN HFSPSNKTTS VPHISQKRTA
101: PGPVVGWPPV RSFRKNLAST SSSKLGNESS HGGQINKSDD GEKQVETKKE GMFVKINMDG VPIGRKVDLN AYNSYEQLSF VVDKLFRGLL AAQRDISDGQ
201: GEEKPIIGLL DGKGEFTLTY EDNEGDKMLV GDVPWQMFVS SVKRLRVIKS SEISSALTFG CSKQEKMMH
101: PGPVVGWPPV RSFRKNLAST SSSKLGNESS HGGQINKSDD GEKQVETKKE GMFVKINMDG VPIGRKVDLN AYNSYEQLSF VVDKLFRGLL AAQRDISDGQ
201: GEEKPIIGLL DGKGEFTLTY EDNEGDKMLV GDVPWQMFVS SVKRLRVIKS SEISSALTFG CSKQEKMMH
Arabidopsis Description
IAA26Auxin-responsive protein IAA26 [Source:UniProtKB/Swiss-Prot;Acc:Q8LAL2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.