Factsheet for Os04t0664400-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Os01t0190300-01
Os01t0236300-01
Os01t0286900-01
Os01t0741900-01
Os02t0228900-01
Os02t0557200-01
Os02t0723400-02
Os02t0805100-01
Os03t0633500-01
Os03t0633800-01
Os03t0742900-01
Os03t0797800-01
Os04t0442000-01
Os04t0664400-01
Os05t0523300-01
Os06t0166500-01
Os07t0182400-01
Os12t0601300-01
Os12t0601400-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G19850.1	Os03t0633500-01	AT1G04250.1	21734647
AT1G19850.1	Os03t0742900-01	AT1G04250.1	21734647
AT1G19850.1	Os12t0601300-01	AT1G04250.1	21734647
AT1G19850.1	Os04t0664400-01	AT1G19850.1	14729917
AT1G19850.1	Os04t0664400-01	AT1G19850.1	21734647
AT1G19850.1	Os04t0664400-01	AT1G19850.1	22096563
AT1G19850.1	Os04t0664400-01	AT1G19850.1	24485461
AT1G19850.1	Os02t0557200-01	AT1G59750.1	22096563
AT1G19850.1	Os04t0442000-01	AT1G59750.1	22096563
AT1G19850.1	Os01t0286900-01	AT3G17600.1	21734647
AT1G19850.1	Os02t0723400-02	AT3G17600.1	21734647
AT1G19850.1	Os03t0633500-01	AT3G23050.1	21734647
AT1G19850.1	Os03t0742900-01	AT3G23050.1	21734647
AT1G19850.1	Os12t0601300-01	AT3G23050.1	21734647
AT1G19850.1	Os01t0236300-01	AT3G61830.1	22096563
AT1G19850.1	Os03t0633800-01	AT4G14560.1	14729917
AT1G19850.1	Os03t0797800-01	AT4G14560.1	14729917
AT1G19850.1	Os07t0182400-01	AT4G14560.1	14729917
AT1G19850.1	Os12t0601400-01	AT4G14560.1	14729917
AT1G19850.1	Os03t0633800-01	AT4G14560.1	22096563
AT1G19850.1	Os03t0797800-01	AT4G14560.1	22096563
AT1G19850.1	Os07t0182400-01	AT4G14560.1	22096563
AT1G19850.1	Os12t0601400-01	AT4G14560.1	22096563
AT1G19850.1	Os03t0633800-01	AT4G14560.1	9342315
AT1G19850.1	Os03t0797800-01	AT4G14560.1	9342315
AT1G19850.1	Os07t0182400-01	AT4G14560.1	9342315
AT1G19850.1	Os12t0601400-01	AT4G14560.1	9342315
AT1G19850.1	Os02t0805100-01	AT4G32280.1	21734647
AT1G19850.1	Os06t0166500-01	AT4G32280.1	21734647
AT1G19850.1	Os01t0190300-01	AT5G25890.1	21734647
AT1G19850.1	Os01t0741900-01	AT5G25890.1	21734647
AT1G19850.1	Os02t0228900-01	AT5G25890.1	21734647
AT1G19850.1	Os05t0523300-01	AT5G25890.1	21734647
AT1G19850.1	Os01t0190300-01	AT5G25890.1	22096563
AT1G19850.1	Os01t0741900-01	AT5G25890.1	22096563
AT1G19850.1	Os02t0228900-01	AT5G25890.1	22096563
AT1G19850.1	Os05t0523300-01	AT5G25890.1	22096563

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES13038	Sorghum	nucleus	79.02	76.85
TraesCS2B01G519200.2	Wheat	nucleus	79.57	76.65
TraesCS2D01G491200.2	Wheat	nucleus	79.57	76.65
TraesCS2A01G491000.1	Wheat	nucleus	79.02	76.13
HORVU2Hr1G109650.18	Barley	nucleus	79.13	76.07
Zm00001d026540_P002	Maize	nucleus	77.17	74.04
Zm00001d001945_P002	Maize	nucleus	75.65	73.42
Bra025775.1-P	Field mustard	nucleus	33.04	64.68
GSMUA_Achr1P20040_001	Banana	nucleus	46.41	54.6
GSMUA_Achr6P36980_001	Banana	nucleus	47.72	51.17
Os11t0523800-01	Rice	nucleus	19.13	48.09
Bra016492.1-P	Field mustard	nucleus	41.09	45.22
VIT_18s0001g13930.t01	Wine grape	nucleus	46.74	45.12
CDY62586	Canola	nucleus	41.41	45.04
CDX83741	Canola	nucleus	41.41	45.04
CDY61164	Canola	nucleus	41.96	44.83
CDY01393	Canola	nucleus	42.07	44.74
Bra012190.1-P	Field mustard	nucleus	42.07	44.64
Solyc04g081240.2.1	Tomato	nucleus	44.78	44.3
CDY29392	Canola	nucleus	42.07	44.18
AT1G19850.1	Thale cress	nucleus	43.26	44.12
PGSC0003DMT400009660	Potato	nucleus	44.35	43.92
CDY39348	Canola	nucleus	41.96	43.91
KRH17404	Soybean	nucleus	44.35	43.87
KRH05923	Soybean	nucleus	44.35	43.73
GSMUA_Achr1P20000_001	Banana	nucleus	45.33	42.95
Os08t0520550-01	Rice	nucleus	28.91	41.76
Os04t0671900-01	Rice	nucleus	34.46	38.75
GSMUA_Achr1P20010_001	Banana	plasma membrane, plastid	42.28	37.05
Os02t0164900-01	Rice	nucleus	35.76	36.23
Os06t0677800-01	Rice	nucleus	35.65	35.77
Os12t0613700-01	Rice	nucleus	34.35	35.15
Os04t0442000-01	Rice	nucleus	25.0	34.18
Os02t0557200-01	Rice	nucleus	25.0	33.92
Os06t0196700-02	Rice	nucleus	37.72	32.89
Os06t0702600-01	Rice	nucleus	35.11	32.59
Os02t0141100-00	Rice	nucleus	35.43	29.21
Os01t0236300-01	Rice	nucleus	22.07	29.04
Os01t0927600-01	Rice	nucleus	25.33	28.84
Os12t0479400-02	Rice	nucleus	25.76	28.18
Os08t0520500-01	Rice	cytosol	0.0	0.0

Protein Annotations

MapMan:15.5.5.1	Gene3D:2.30.30.1040	Gene3D:2.40.330.10	Gene3D:3.10.20.90	UniProt:A0A0N7KJV7	InterPro:Auxin_resp
InterPro:B3_DNA-bd	ProteinID:BAS91489.1	ProteinID:BAS91490.1	InterPro:DNA-bd_pseudobarrel_sf	GO:GO:0000003	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0007154
GO:GO:0007165	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009719
GO:GO:0009725	GO:GO:0009733	GO:GO:0009734	GO:GO:0009790	GO:GO:0009791	GO:GO:0009793
GO:GO:0009908	GO:GO:0009942	GO:GO:0009987	GO:GO:0010051	GO:GO:0010305	GO:GO:0016020
GO:GO:0042802	GO:GO:0044212	GO:GO:0048364	GO:GO:0048507	InterPro:IPR000270	InterPro:IPR003340
InterPro:IPR015300	EnsemblPlantsGene:Os04g0664400	EnsemblPlants:Os04t0664400-01	InterPro:PB1_dom	PFAM:PF02362	PFAM:PF06507
PFscan:PS50863	PFscan:PS51745	PANTHER:PTHR31384	PANTHER:PTHR31384:SF10	SMART:SM01019	SUPFAM:SSF101936
SUPFAM:SSF54277	UniParc:UPI0000DD931A	SEG:seg	:	:	:

Description

rice ortholog of Arabidopsis MONOPTEROS, auxin response factor-5, auxin response factor 5, auxin response factor-11, auxin response factor 11Auxin response factor 1. (Os04t0664400-01);Similar to Auxin response factor 11. (Os04t0664400-02)

Coordinates

chr4:-:33888122..33894393

Molecular Weight (calculated)

101298.0 Da

IEP (calculated)

6.412

GRAVY (calculated)

-0.512

Length

920 amino acids

Sequence
(BLAST)

001: MASSQEKAKT GVLRNAAALL DEMQLMGETQ GAKKVINSEL WHACAGPLVC LPQRGSLVYY FPQGHSEQVA ATTRKIPNSR IPNYPNLPSQ LLCQVHNITL
101: HADKDTDEVY AQMTLQPVNS ETDVFPIPTL GAYTKSKHPT EYFCKNLTAS DTSTHGGFSV PRRAAEKLFP QLDYSMQPPN QELIVRDLHD NMWTFRHIYR
201: GQPKRHLLTT GWSLFVGAKR LKAGDSVLFI RDEKSQLLLG VRRATRQQTM LSSSVLSTDS MHIGVLAAAA HAASSGSSFT IYYNPRTSPS PFVIPVARYN
301: KATYMQPSVG MRFAMMFETE ESSKRRYTGT VVGISDYDPM RWPNSKWRNL QVEWDEHGYG ERPERVSIWD IETPENTLVF PSSTLNSKRQ CLPGYGVSVP
401: GMEIGSANMS SFPRAQGNPY GSLQHIPAVG SELAIMLLNQ SGQTLGSPLS FHQSSYSSII QNVKQNYIPP LTVSTSACLT KQESLPSDDA QHQFHMANMQ
501: NGDLEGSEVQ PVIDSISESK LNATSRDPRN TDSYTSRSTS EQNSKGEPRG KTRRSKKGLP HKTVSEKSDL SSAPSWICDN QQVGLESKLV GCDEQVNCGN
601: IEDSSGALTQ GNFVGQPHGH QVEQKGVLSP PKVESSKSPD GGKSVNSFPN QGCFSQFIDG LDWMTQPSYY QDSNVIQPAG VSENIFSSSA DIPPSMIADT
701: METFQASCLS DCLPNSIQEF ISSPDLNSLT FLSPDMQNLE VQLQHDGSNL PSTSNSFVQM SFSEESASQS ANLSGLHMES THRSINTTSC SQPMSTGGFD
801: AGMYSKLPRL KESQILSLPE IHTNSMGTSA CSMDATEYSL DRSAKPMKPP VRTYTKVQKQ GSVGRSIDVT GFRNYHELRS AIACMFGLQG KLEHPGSSEW
901: KLVYVDYEND VLLVGDDPWE

Best Arabidopsis Sequence Match ( AT1G19850.1 )
(BLAST)

001: MMASLSCVED KMKTSCLVNG GGTITTTTSQ STLLEEMKLL KDQSGTRKPV INSELWHACA GPLVCLPQVG SLVYYFSQGH SEQVAVSTRR SATTQVPNYP
101: NLPSQLMCQV HNVTLHADKD SDEIYAQMSL QPVHSERDVF PVPDFGMLRG SKHPTEFFCK TLTASDTSTH GGFSVPRRAA EKLFPPLDYS AQPPTQELVV
201: RDLHENTWTF RHIYRGQPKR HLLTTGWSLF VGSKRLRAGD SVLFIRDEKS QLMVGVRRAN RQQTALPSSV LSADSMHIGV LAAAAHATAN RTPFLIFYNP
301: RACPAEFVIP LAKYRKAICG SQLSVGMRFG MMFETEDSGK RRYMGTIVGI SDLDPLRWPG SKWRNLQVEW DEPGCNDKPT RVSPWDIETP ESLFIFPSLT
401: SGLKRQLHPS YFAGETEWGS LIKRPLIRVP DSANGIMPYA SFPSMASEQL MKMMMRPHNN QNVPSFMSEM QQNIVMGNGG LLGDMKMQQP LMMNQKSEMV
501: QPQNKLTVNP SASNTSGQEQ NLSQSMSAPA KPENSTLSGC SSGRVQHGLE QSMEQASQVT TSTVCNEEKV NQLLQKPGAS SPVQADQCLD ITHQIYQPQS
601: DPINGFSFLE TDELTSQVSS FQSLAGSYKQ PFILSSQDSS AVVLPDSTNS PLFHDVWDTQ LNGLKFDQFS PLMQQDLYAS QNICMSNSTT SNILDPPLSN
701: TVLDDFCAIK DTDFQNHPSG CLVGNNNTSF AQDVQSQITS ASFADSQAFS RQDFPDNSGG TGTSSSNVDF DDCSLRQNSK GSSWQKIATP RVRTYTKVQK
801: TGSVGRSIDV TSFKDYEELK SAIECMFGLE GLLTHPQSSG WKLVYVDYES DVLLVGDDPW EEFVGCVRCI RILSPTEVQQ MSEEGMKLLN SAGINDLKTS
901: VS

Arabidopsis Description

ARF5Auxin response factor [Source:UniProtKB/TrEMBL;Acc:A0A178W993]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.