Subcellular Localization
min:
: max
Winner_takes_all: vacuole
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
vacuole:
15069638
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER90896 | Sorghum | nucleus | 86.86 | 87.23 |
| TraesCS5A01G382600.1 | Wheat | nucleus | 83.47 | 84.55 |
| TraesCS5D01G392000.1 | Wheat | nucleus | 82.63 | 84.05 |
| Zm00001d033976_P002 | Maize | nucleus | 84.32 | 83.97 |
| TraesCS5B01G386800.1 | Wheat | nucleus | 83.05 | 83.76 |
| Zm00001d013302_P002 | Maize | nucleus | 79.24 | 82.02 |
| HORVU5Hr1G094220.1 | Barley | nucleus | 82.2 | 81.86 |
| VIT_14s0081g00010.t01 | Wine grape | nucleus, plastid | 48.31 | 67.06 |
| KRG92683 | Soybean | nucleus | 58.47 | 60.79 |
| PGSC0003DMT400041976 | Potato | nucleus | 53.81 | 59.62 |
| CDY10694 | Canola | mitochondrion | 43.22 | 58.62 |
| Solyc06g053830.2.1 | Tomato | nucleus | 52.97 | 57.34 |
| CDY47148 | Canola | nucleus | 55.51 | 56.22 |
| KRH34377 | Soybean | nucleus | 56.78 | 56.07 |
| Bra039855.1-P | Field mustard | nucleus | 55.08 | 55.79 |
| Solyc06g008590.2.1 | Tomato | nucleus | 49.15 | 55.77 |
| PGSC0003DMT400013627 | Potato | nucleus | 50.42 | 55.61 |
| CDY62130 | Canola | cytosol, nucleus, plastid | 54.66 | 55.36 |
| VIT_05s0020g04690.t01 | Wine grape | cytosol, nucleus, plastid | 56.78 | 55.14 |
| CDX92973 | Canola | cytosol, nucleus, plastid | 55.08 | 54.85 |
| Bra001900.1-P | Field mustard | cytosol, nucleus, plastid | 55.08 | 54.85 |
| Bra040398.1-P | Field mustard | nucleus | 53.39 | 54.55 |
| VIT_07s0141g00290.t01 | Wine grape | cytosol, nucleus, plastid | 54.66 | 54.2 |
| CDY41894 | Canola | cytosol, nucleus, plastid | 52.97 | 54.11 |
| CDX89832 | Canola | nucleus | 51.27 | 54.02 |
| AT3G04730.1 | Thale cress | cytosol, nucleus, plastid | 53.81 | 53.81 |
| Bra033886.1-P | Field mustard | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 55.08 | 53.72 |
| KRH32099 | Soybean | nucleus | 56.36 | 53.63 |
| CDY18214 | Canola | nucleus | 50.85 | 53.57 |
| Bra015298.1-P | Field mustard | nucleus | 50.85 | 53.57 |
| KRH67289 | Soybean | nucleus | 57.63 | 53.54 |
| AT4G14550.2 | Thale cress | nucleus | 52.97 | 53.42 |
| Bra032520.1-P | Field mustard | nucleus | 51.27 | 53.3 |
| AT3G23050.1 | Thale cress | cytosol, nucleus, plastid | 54.66 | 53.09 |
| KRH68738 | Soybean | nucleus | 54.66 | 53.09 |
| CDY32537 | Canola | nucleus | 51.27 | 53.07 |
| CDY10068 | Canola | cytosol, nucleus, plastid | 51.27 | 53.07 |
| Solyc09g083290.2.1 | Tomato | nucleus | 52.97 | 52.97 |
| KRG95616 | Soybean | nucleus | 56.36 | 52.78 |
| Os12t0601300-01 | Rice | nucleus | 61.86 | 52.71 |
| PGSC0003DMT400015610 | Potato | nucleus | 52.97 | 52.52 |
| CDY30781 | Canola | cytosol, nucleus, plastid | 53.39 | 52.5 |
| CDY63910 | Canola | cytosol, nucleus, plastid | 53.39 | 52.5 |
| CDY10349 | Canola | endoplasmic reticulum, extracellular | 54.66 | 52.44 |
| KRG96977 | Soybean | nucleus | 50.85 | 52.17 |
| CDY21111 | Canola | cytosol, nucleus, plastid | 52.12 | 52.12 |
| AT1G04250.1 | Thale cress | cytosol, nucleus, plastid | 50.42 | 51.97 |
| PGSC0003DMT400050101 | Potato | cytosol, nucleus, plastid | 54.66 | 51.81 |
| Bra040122.1-P | Field mustard | nucleus | 49.15 | 51.56 |
| Bra030560.1-P | Field mustard | nucleus | 50.0 | 51.53 |
| CDY15493 | Canola | cytosol, nucleus, plastid | 50.0 | 51.53 |
| Solyc01g097290.2.1 | Tomato | nucleus | 54.66 | 51.39 |
| Os03t0633500-01 | Rice | cytosol | 50.42 | 51.07 |
| CDY30017 | Canola | cytosol, nucleus, plastid | 50.85 | 50.63 |
| KRH71337 | Soybean | nucleus | 35.17 | 48.82 |
| KRH34091 | Soybean | cytosol, nucleus, plastid | 45.76 | 46.75 |
| Os01t0178500-02 | Rice | nucleus | 38.56 | 45.73 |
| Os05t0230700-01 | Rice | nucleus | 48.73 | 44.75 |
| Os12t0601400-01 | Rice | nucleus | 36.44 | 43.65 |
| CDY50750 | Canola | nucleus, plastid | 53.39 | 43.3 |
| Os06t0335500-01 | Rice | nucleus | 47.46 | 42.11 |
| Os01t0231000-01 | Rice | nucleus | 45.76 | 41.06 |
| KRG92429 | Soybean | cytosol, nucleus, plastid | 56.36 | 40.18 |
| Os05t0178600-01 | Rice | nucleus | 36.02 | 40.09 |
| Os03t0797800-01 | Rice | nucleus | 33.05 | 39.59 |
| Os03t0633800-01 | Rice | nucleus | 35.59 | 37.17 |
| Os07t0182400-01 | Rice | plastid | 33.47 | 36.07 |
| Os05t0559400-01 | Rice | nucleus | 41.53 | 34.88 |
| Os01t0675700-01 | Rice | nucleus | 38.14 | 33.21 |
| CDY63072 | Canola | nucleus | 51.27 | 30.4 |
Protein Annotations
| Gene3D:3.10.20.90 | MapMan:35.1 | EntrezGene:4334069 | ProteinID:AAR87294.1 | ProteinID:AAR87295.1 | ProteinID:ABF98810.1 |
| EMBL:AK059838 | InterPro:AUX/IAA_dom | InterPro:AUX_IAA | ProteinID:BAF13144.1 | ProteinID:BAS86321.1 | ProteinID:EAZ28542.1 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0007154 | GO:GO:0007165 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009719 | GO:GO:0009734 | GO:GO:0009987 |
| InterPro:IPR000270 | EnsemblPlantsGene:Os03g0742900 | EnsemblPlants:Os03t0742900-01 | InterPro:PB1_dom | PFAM:PF02309 | PFscan:PS51745 |
| PANTHER:PTHR31734 | PANTHER:PTHR31734:SF21 | UniProt:Q10D34 | SUPFAM:SSF54277 | UniParc:UPI000019AD03 | RefSeq:XP_015631444.1 |
| SEG:seg | : | : | : | : | : |
Description
IAA13Aux /IAA protein. (Os03t0742900-01);Similar to cDNA clone:006-206-C11, full insert sequence. (Os03t0742900-03)
Coordinates
chr3:-:30480796..30483289
Molecular Weight (calculated)
25102.8 Da
IEP (calculated)
9.499
GRAVY (calculated)
-0.542
Length
236 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGADVDVGT ELRLGLPGGG GGAAEAAAKA AKRGFEETID LKLKLPTAGM EEAAAGKAEA PAAEKAKRPA EAAAADAEKP PAPKAQAVGW PPVRSFRRNI
101: MTVQSVKSKK EEEADKQQQQ PAANASGSNS SAFVKVSMDG APYLRKVDLK MYNSYKDLSL ALQKMFGTFT ATGNNMNEVN GSDAVTTYED KDGDWMLVGD
201: VPWQMFVESC KRLRIMKGSE AIGLAPRAKD KYKNKS
101: MTVQSVKSKK EEEADKQQQQ PAANASGSNS SAFVKVSMDG APYLRKVDLK MYNSYKDLSL ALQKMFGTFT ATGNNMNEVN GSDAVTTYED KDGDWMLVGD
201: VPWQMFVESC KRLRIMKGSE AIGLAPRAKD KYKNKS
001: MINFEATELR LGLPGGNHGG EMAGKNNGKR GFSETVDLKL NLSSTAMDSV SKVDLENMKE KVVKPPAKAQ VVGWPPVRSF RKNVMSGQKP TTGDATEGND
101: KTSGSSGATS SASACATVAY VKVSMDGAPY LRKIDLKLYK TYQDLSNALS KMFSSFTIGN YGPQGMKDFM NESKLIDLLN GSDYVPTYED KDGDWMLVGD
201: VPWEMFVDSC KRIRIMKGSE AIGLAPRALE KCKNRS
101: KTSGSSGATS SASACATVAY VKVSMDGAPY LRKIDLKLYK TYQDLSNALS KMFSSFTIGN YGPQGMKDFM NESKLIDLLN GSDYVPTYED KDGDWMLVGD
201: VPWEMFVDSC KRIRIMKGSE AIGLAPRALE KCKNRS
Arabidopsis Description
IAA16Auxin-responsive protein IAA16 [Source:UniProtKB/Swiss-Prot;Acc:O24407]
SUBAcon: [plastid,nucleus,cytosol]
SUBAcon: [plastid,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.