Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7A01G331100.1 | Wheat | nucleus | 77.07 | 85.42 |
| EER89802 | Sorghum | cytosol | 79.32 | 84.74 |
| TraesCS7D01G339300.1 | Wheat | nucleus | 75.56 | 83.75 |
| TraesCS7B01G242800.1 | Wheat | nucleus | 75.94 | 82.79 |
| HORVU0Hr1G021630.1 | Barley | cytosol, mitochondrion, nucleus | 53.01 | 76.63 |
| Os05t0230700-01 | Rice | nucleus | 60.15 | 62.26 |
| GSMUA_Achr9P06290_001 | Banana | nucleus | 60.15 | 58.39 |
| Os01t0231000-01 | Rice | nucleus | 56.77 | 57.41 |
| GSMUA_Achr10P... | Banana | nucleus | 59.77 | 57.19 |
| GSMUA_Achr6P26730_001 | Banana | nucleus | 58.27 | 55.56 |
| GSMUA_Achr7P10930_001 | Banana | nucleus | 54.14 | 53.93 |
| KRH74730 | Soybean | plastid | 32.33 | 53.42 |
| PGSC0003DMT400006548 | Potato | plastid | 50.75 | 51.72 |
| GSMUA_Achr2P09210_001 | Banana | nucleus | 47.74 | 51.21 |
| Solyc03g120500.2.1 | Tomato | nucleus | 53.01 | 50.72 |
| VIT_11s0016g03540.t01 | Wine grape | nucleus | 60.53 | 50.31 |
| VIT_09s0002g04080.t01 | Wine grape | nucleus | 59.77 | 49.69 |
| CDY06836 | Canola | nucleus | 46.99 | 49.6 |
| KRH60250 | Soybean | nucleus | 53.01 | 49.13 |
| KRH23426 | Soybean | nucleus | 56.39 | 48.86 |
| Os05t0559400-01 | Rice | nucleus | 51.5 | 48.75 |
| PGSC0003DMT400001013 | Potato | nucleus | 51.13 | 48.75 |
| KRH39325 | Soybean | nucleus | 56.02 | 48.53 |
| Bra011082.1-P | Field mustard | nucleus | 52.63 | 48.28 |
| Os12t0601400-01 | Rice | nucleus | 35.71 | 48.22 |
| Os03t0742900-01 | Rice | vacuole | 42.11 | 47.46 |
| Solyc12g007230.1.1 | Tomato | nucleus | 52.63 | 47.46 |
| KRH09902 | Soybean | nucleus | 56.77 | 47.34 |
| Os01t0675700-01 | Rice | nucleus | 48.12 | 47.23 |
| AT4G29080.1 | Thale cress | nucleus | 52.26 | 45.57 |
| Os01t0178500-02 | Rice | nucleus | 33.83 | 45.23 |
| Os12t0601300-01 | Rice | nucleus | 44.74 | 42.96 |
| KRH44313 | Soybean | nucleus | 51.5 | 42.55 |
| Os03t0633500-01 | Rice | cytosol | 36.84 | 42.06 |
| Os03t0797800-01 | Rice | nucleus | 30.83 | 41.62 |
| KRH47242 | Soybean | nucleus | 49.62 | 41.38 |
| Os03t0633800-01 | Rice | nucleus | 34.96 | 41.15 |
| KRH41538 | Soybean | golgi, plasma membrane | 53.38 | 39.78 |
| Os07t0182400-01 | Rice | plastid | 32.33 | 39.27 |
| Os05t0178600-01 | Rice | nucleus | 29.7 | 37.26 |
Protein Annotations
| Gene3D:3.10.20.90 | MapMan:35.1 | EntrezGene:4340939 | EMBL:AK121989 | InterPro:AUX/IAA_dom | InterPro:AUX_IAA |
| ProteinID:BAD61890.1 | ProteinID:BAF19468.1 | ProteinID:BAS97586.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009719 | GO:GO:0009733 | GO:GO:0009734 | GO:GO:0009987 | InterPro:IPR000270 |
| EnsemblPlantsGene:Os06g0335500 | EnsemblPlants:Os06t0335500-01 | InterPro:PB1_dom | PFAM:PF02309 | PFscan:PS51745 | PANTHER:PTHR31734 |
| PANTHER:PTHR31734:SF83 | UniProt:Q5Z749 | SUPFAM:SSF54277 | UniParc:UPI00004506B6 | RefSeq:XP_015644240.1 | SEG:seg |
Description
IAA21AUX/IAA protein family protein. (Os06t0335500-01);Similar to Auxin-responsive protein IAA21. (Os06t0335500-02)
Coordinates
chr6:+:13345347..13349055
Molecular Weight (calculated)
28225.6 Da
IEP (calculated)
7.900
GRAVY (calculated)
-0.528
Length
266 amino acids
Sequence
(BLAST)
(BLAST)
001: MAPPQERDYI GLSPAAAAAL ATELRLGLPG TAEEAESEGG GGGGTDAAPL TLELLPKGGA KRGFADAIVG GPAGQRREAA GGKAAAAAAE AEEEEEKKKA
101: QAPAAKAQVV GWPPIRSYRK NTMAMSQPAL KGKDDGEAKQ APASGCLYVK VSMDGAPYLR KVDLKMYKNY KELSLALEKM FSCFTVGHGE SNGKSGRDGL
201: SDCRLMDLKN GTELVLTYED KDEDWMLVGD VPWRMFTDSC RRLRIMKGSD AVGLAPRATD KSKNRN
101: QAPAAKAQVV GWPPIRSYRK NTMAMSQPAL KGKDDGEAKQ APASGCLYVK VSMDGAPYLR KVDLKMYKNY KELSLALEKM FSCFTVGHGE SNGKSGRDGL
201: SDCRLMDLKN GTELVLTYED KDEDWMLVGD VPWRMFTDSC RRLRIMKGSD AVGLAPRATD KSKNRN
001: MSVSVAAEHD YIGLSEFPTM EATTMSDKTK TRDNNNGLNF KATELRLGLP GSESPERVDS RFLALNKSSC PVSGAKRVFS DAINDSNKWV FSPGSTTATG
101: DVGSGSGPRT SVVKDGKSTT FTKPAVPVKE KKSSATAPAS KAQVVGWPPI RSFRKNSMAS SQSQKPGNNS ETEEAEAKSG PEQPCLYVKV SMEGAPYLRK
201: IDLKTYKSYL ELSSALEKMF SCFTIGQFGS HGGCGRDGLN ESRLTDLLRG SEYVVTYEDK DSDWMLVGDV PWEMFICSCK KLRIMKSSEA IGLAPRVMEK
301: CRSRN
101: DVGSGSGPRT SVVKDGKSTT FTKPAVPVKE KKSSATAPAS KAQVVGWPPI RSFRKNSMAS SQSQKPGNNS ETEEAEAKSG PEQPCLYVKV SMEGAPYLRK
201: IDLKTYKSYL ELSSALEKMF SCFTIGQFGS HGGCGRDGLN ESRLTDLLRG SEYVVTYEDK DSDWMLVGDV PWEMFICSCK KLRIMKSSEA IGLAPRVMEK
301: CRSRN
Arabidopsis Description
IAA27Auxin-responsive protein IAA27 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZSY8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.