Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- nucleus 4
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY46895 | Canola | cytosol | 33.91 | 54.17 |
| Bra021257.1-P | Field mustard | cytosol | 33.04 | 52.78 |
| EES00605 | Sorghum | nucleus, plastid | 80.0 | 47.67 |
| Zm00001d008201_P001 | Maize | cytosol | 50.43 | 44.62 |
| Zm00001d040541_P001 | Maize | nucleus, plastid | 66.96 | 42.54 |
| Bra001670.1-P | Field mustard | nucleus | 48.7 | 37.84 |
| Os02t0723400-02 | Rice | nucleus | 64.35 | 36.1 |
| CDX82361 | Canola | cytosol, plastid | 48.7 | 35.67 |
| AT3G17600.1 | Thale cress | nucleus, plastid | 48.7 | 35.44 |
| CDY71609 | Canola | nucleus, plastid | 47.83 | 35.03 |
| Bra022224.1-P | Field mustard | nucleus, plastid | 47.83 | 34.81 |
| CDX92140 | Canola | nucleus, plastid | 47.83 | 34.81 |
| VIT_07s0005g02550.t01 | Wine grape | plastid | 51.3 | 33.71 |
| CDX95843 | Canola | plastid | 45.22 | 33.55 |
| GSMUA_Achr8P29850_001 | Banana | nucleus | 51.3 | 33.52 |
| GSMUA_Achr9P16800_001 | Banana | nucleus | 48.7 | 32.18 |
| KRH33660 | Soybean | plastid | 47.83 | 31.07 |
| KRH69143 | Soybean | plastid | 47.83 | 30.56 |
| KRG96613 | Soybean | plastid | 46.09 | 29.94 |
| VIT_05s0020g01070.t01 | Wine grape | plastid | 51.3 | 29.8 |
| KRH68346 | Soybean | plastid | 46.09 | 29.44 |
| AT3G62100.1 | Thale cress | plastid | 43.48 | 29.07 |
| CDY25089 | Canola | plastid | 43.48 | 28.9 |
| Bra003484.1-P | Field mustard | nucleus, plastid | 42.61 | 28.49 |
| CDX67874 | Canola | plastid | 42.61 | 28.32 |
| CDY58757 | Canola | plastid | 41.74 | 27.91 |
| CDY48005 | Canola | cytosol, plastid | 41.74 | 27.59 |
| CDY27511 | Canola | cytosol, plastid | 41.74 | 27.59 |
| Bra040476.1-P | Field mustard | cytosol, plastid | 41.74 | 27.59 |
| AT2G46990.1 | Thale cress | plastid | 41.74 | 27.43 |
| CDY11402 | Canola | plastid | 41.74 | 27.12 |
| Bra007661.1-P | Field mustard | plastid | 41.74 | 27.12 |
| CDY46058 | Canola | plastid | 37.39 | 25.75 |
| KRH19441 | Soybean | endoplasmic reticulum, vacuole | 50.43 | 23.77 |
| Os06t0166500-01 | Rice | nucleus | 37.39 | 23.5 |
| KRH02508 | Soybean | endoplasmic reticulum, extracellular, plasma membrane | 51.3 | 22.69 |
| Os02t0805100-01 | Rice | nucleus | 35.65 | 22.53 |
| Bra014411.1-P | Field mustard | nucleus, plastid | 22.61 | 20.63 |
| Os08t0109400-01 | Rice | nucleus | 37.39 | 17.48 |
| Os01t0190300-01 | Rice | nucleus | 32.17 | 15.55 |
| Os02t0817600-02 | Rice | nucleus | 37.39 | 15.3 |
| Os02t0228900-01 | Rice | nucleus | 32.17 | 12.33 |
| Os01t0741900-01 | Rice | nucleus | 33.04 | 11.34 |
| Os05t0523300-01 | Rice | nucleus | 31.3 | 11.01 |
| Os11t0221000-01 | Rice | nucleus | 16.52 | 6.6 |
Protein Annotations
| Gene3D:3.10.20.90 | MapMan:35.1 | UniProt:A0A0N7KCS5 | InterPro:AUX/IAA_dom | InterPro:AUX_IAA | ProteinID:BAS71633.1 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0007154 | GO:GO:0007165 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009719 | GO:GO:0009734 | GO:GO:0009987 |
| InterPro:IPR000270 | EnsemblPlantsGene:Os01g0286900 | EnsemblPlants:Os01t0286900-01 | InterPro:PB1_dom | PFAM:PF02309 | PFscan:PS51745 |
| PANTHER:PTHR31734 | PANTHER:PTHR31734:SF15 | SUPFAM:SSF54277 | UniParc:UPI0000DD8A9B | SEG:seg | : |
Description
IAA4Similar to Auxin-responsive protein IAA31 (Indoleacetic acid-induced protein 31). (Os01t0286900-01)
Coordinates
chr1:+:10312342..10314826
Molecular Weight (calculated)
13249.4 Da
IEP (calculated)
10.046
GRAVY (calculated)
-0.297
Length
115 amino acids
Sequence
(BLAST)
(BLAST)
001: GLASRRRRRP PSGGARRRRT LFVKVYMEGV PIGRKLDLLL LDGYDSLLIK LCHMFKTPIT YADVMECHQQ VPGQKAAHVL TYEDQDGDWM MVGDVPWELF
101: LSSVKKLRIA RMDKC
101: LSSVKKLRIA RMDKC
001: MEVSNSCSSF SSSSVDSTKP SPSESSVNLS LSLTFPSTSP QREARQDWPP IKSRLRDTLK GRRLLRRGDD TSLFVKVYME GVPIGRKLDL CVFSGYESLL
101: ENLSHMFDTS IICGNRDRKH HVLTYEDKDG DWMMVGDIPW DMFLETVRRL KITRPERY
101: ENLSHMFDTS IICGNRDRKH HVLTYEDKDG DWMMVGDIPW DMFLETVRRL KITRPERY
Arabidopsis Description
IAA31Auxin-responsive protein [Source:UniProtKB/TrEMBL;Acc:A0A178V8S2]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.