Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os01t0286900-01 | Rice | nucleus | 44.62 | 50.43 |
| CDY46895 | Canola | cytosol | 26.15 | 47.22 |
| Bra021257.1-P | Field mustard | cytosol | 25.38 | 45.83 |
| EES00605 | Sorghum | nucleus, plastid | 48.46 | 32.64 |
| Zm00001d040541_P001 | Maize | nucleus, plastid | 43.85 | 31.49 |
| Bra001670.1-P | Field mustard | nucleus | 34.62 | 30.41 |
| CDX82361 | Canola | cytosol, plastid | 34.62 | 28.66 |
| CDY71609 | Canola | nucleus, plastid | 33.85 | 28.03 |
| AT3G17600.1 | Thale cress | nucleus, plastid | 33.85 | 27.85 |
| CDX92140 | Canola | nucleus, plastid | 33.08 | 27.22 |
| Bra022224.1-P | Field mustard | nucleus, plastid | 33.08 | 27.22 |
| CDX95843 | Canola | plastid | 32.31 | 27.1 |
| GSMUA_Achr8P29850_001 | Banana | nucleus | 36.15 | 26.7 |
| AT3G62100.1 | Thale cress | plastid | 34.62 | 26.16 |
| Bra040476.1-P | Field mustard | cytosol, plastid | 34.62 | 25.86 |
| CDY27511 | Canola | cytosol, plastid | 34.62 | 25.86 |
| CDY48005 | Canola | cytosol, plastid | 34.62 | 25.86 |
| VIT_07s0005g02550.t01 | Wine grape | plastid | 34.62 | 25.71 |
| Bra003484.1-P | Field mustard | nucleus, plastid | 33.85 | 25.58 |
| CDX67874 | Canola | plastid | 33.85 | 25.43 |
| CDY25089 | Canola | plastid | 33.85 | 25.43 |
| AT2G46990.1 | Thale cress | plastid | 33.85 | 25.14 |
| CDY58757 | Canola | plastid | 33.08 | 25.0 |
| GSMUA_Achr9P16800_001 | Banana | nucleus | 33.08 | 24.71 |
| CDY11402 | Canola | plastid | 33.08 | 24.29 |
| Bra007661.1-P | Field mustard | plastid | 33.08 | 24.29 |
| VIT_05s0020g01070.t01 | Wine grape | plastid | 36.15 | 23.74 |
| KRH33660 | Soybean | plastid | 30.0 | 22.03 |
| KRH69143 | Soybean | plastid | 30.0 | 21.67 |
| KRG96613 | Soybean | plastid | 29.23 | 21.47 |
| KRH68346 | Soybean | plastid | 29.23 | 21.11 |
| Zm00001d045203_P001 | Maize | cytosol | 30.77 | 18.52 |
| Bra014411.1-P | Field mustard | nucleus, plastid | 16.92 | 17.46 |
| CDY46058 | Canola | plastid | 22.31 | 17.37 |
| KRH19441 | Soybean | endoplasmic reticulum, vacuole | 32.31 | 17.21 |
| Zm00001d018414_P001 | Maize | nucleus | 26.92 | 16.99 |
| Zm00001d000288_P001 | Maize | cytosol | 25.38 | 16.75 |
| KRH02508 | Soybean | endoplasmic reticulum, extracellular, plasma membrane | 33.08 | 16.54 |
| Zm00001d049715_P001 | Maize | nucleus | 27.69 | 15.45 |
| Zm00001d010360_P001 | Maize | cytosol, nucleus | 24.62 | 14.04 |
| Zm00001d037691_P003 | Maize | cytosol, nucleus | 24.62 | 12.96 |
| Zm00001d051911_P002 | Maize | nucleus | 27.69 | 12.24 |
| Zm00001d039513_P001 | Maize | cytosol, nucleus, plastid | 21.54 | 12.23 |
| Zm00001d016277_P002 | Maize | nucleus | 22.31 | 9.7 |
| Zm00001d049141_P002 | Maize | nucleus | 25.38 | 9.3 |
| Zm00001d004697_P001 | Maize | nucleus | 23.08 | 8.6 |
| Zm00001d043515_P002 | Maize | cytosol, mitochondrion, nucleus | 21.54 | 7.84 |
| Zm00001d038784_P001 | Maize | nucleus | 16.15 | 5.95 |
Protein Annotations
| Gene3D:3.10.20.90 | MapMan:35.1 | UniProt:A0A1D6FAV3 | ProteinID:AQK89178.1 | InterPro:AUX/IAA_dom | InterPro:AUX_IAA |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0007154 | GO:GO:0007165 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009719 | GO:GO:0009734 | GO:GO:0009987 |
| GO:GO:0016020 | GO:GO:0016021 | InterPro:IPR000270 | InterPro:PB1_dom | PFAM:PF02309 | PFscan:PS51745 |
| PANTHER:PTHR31734 | PANTHER:PTHR31734:SF15 | SUPFAM:SSF54277 | TMHMM:TMhelix | UniParc:UPI0008423813 | EnsemblPlantsGene:Zm00001d008201 |
| EnsemblPlants:Zm00001d008201_P001 | EnsemblPlants:Zm00001d008201_T001 | SEG:seg | : | : | : |
Description
Aux/IAA-transcription factor 34Auxin-responsive protein IAA20
Coordinates
chr8:-:989823..991128
Molecular Weight (calculated)
15143.4 Da
IEP (calculated)
5.184
GRAVY (calculated)
-0.012
Length
130 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGVAIGRKL DLLLLDGYDS LLAKLRHMFK ASITFADAME YHQRVPHEKP AHVLTYEDRD GDWMMVGDVP WEYALPWKCE ETEDLQEQIN ASTLAKLIIR
101: ALHGLYFFLL FIYIGSYSRK ILLATEWTCM
101: ALHGLYFFLL FIYIGSYSRK ILLATEWTCM
001: MEVSNSCSSF SSSSVDSTKP SPSESSVNLS LSLTFPSTSP QREARQDWPP IKSRLRDTLK GRRLLRRGDD TSLFVKVYME GVPIGRKLDL CVFSGYESLL
101: ENLSHMFDTS IICGNRDRKH HVLTYEDKDG DWMMVGDIPW DMFLETVRRL KITRPERY
101: ENLSHMFDTS IICGNRDRKH HVLTYEDKDG DWMMVGDIPW DMFLETVRRL KITRPERY
Arabidopsis Description
IAA31Auxin-responsive protein [Source:UniProtKB/TrEMBL;Acc:A0A178V8S2]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.