Subcellular Localization
min:
: max
Winner_takes_all: golgi, extracellular
Predictor Summary:
Predictor Summary:
- mitochondrion 3
- extracellular 2
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 2
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER90734 | Sorghum | cytosol, nucleus, plastid | 50.62 | 87.1 |
| Zm00001d013071_P001 | Maize | nucleus | 49.06 | 86.74 |
| TraesCS5B01G446100.1 | Wheat | cytosol, mitochondrion, nucleus | 38.44 | 69.49 |
| TraesCS5D01G449400.1 | Wheat | nucleus | 39.06 | 69.06 |
| Os03t0797800-01 | Rice | nucleus | 38.75 | 62.94 |
| HORVU5Hr1G106350.2 | Barley | plastid | 42.81 | 60.89 |
| GSMUA_Achr4P05200_001 | Banana | mitochondrion | 22.81 | 58.4 |
| KRH34375 | Soybean | cytosol, nucleus | 21.25 | 55.74 |
| Zm00001d018973_P001 | Maize | nucleus | 33.75 | 53.47 |
| Solyc06g084070.2.1 | Tomato | nucleus, plastid | 24.69 | 50.64 |
| PGSC0003DMT400051896 | Potato | plastid | 24.06 | 50.33 |
| AT4G14560.1 | Thale cress | nucleus | 24.69 | 47.02 |
| CDX92972 | Canola | nucleus | 24.69 | 46.2 |
| CDX94876 | Canola | nucleus | 24.69 | 46.2 |
| Bra001899.1-P | Field mustard | nucleus | 24.69 | 46.2 |
| CDY40837 | Canola | nucleus | 24.69 | 46.2 |
| Solyc04g054280.1.1 | Tomato | nucleus | 23.75 | 45.78 |
| VIT_07s0141g00270.t01 | Wine grape | nucleus | 26.56 | 45.7 |
| CDY35493 | Canola | nucleus | 24.38 | 45.61 |
| Bra023771.1-P | Field mustard | nucleus | 24.38 | 45.61 |
| CDY10692 | Canola | nucleus | 24.38 | 45.35 |
| Bra033890.1-P | Field mustard | nucleus | 24.38 | 45.35 |
| CDY32536 | Canola | cytosol, nucleus, plastid | 25.31 | 45.0 |
| CDY53735 | Canola | nucleus | 24.06 | 44.77 |
| CDY10346 | Canola | nucleus | 24.06 | 44.77 |
| Solyc06g053840.2.1 | Tomato | nucleus | 26.56 | 44.74 |
| Solyc09g065850.2.1 | Tomato | nucleus | 25.62 | 44.32 |
| GSMUA_Achr11P... | Banana | nucleus | 24.06 | 44.25 |
| GSMUA_Achr9P24330_001 | Banana | nucleus | 23.44 | 43.86 |
| VIT_14s0030g02310.t01 | Wine grape | nucleus | 27.19 | 43.72 |
| PGSC0003DMT400049677 | Potato | nucleus | 25.0 | 43.72 |
| PGSC0003DMT400042074 | Potato | cytosol, nucleus, plastid | 25.94 | 43.68 |
| CDY36883 | Canola | nucleus | 23.44 | 43.6 |
| Bra032521.1-P | Field mustard | nucleus | 24.38 | 43.33 |
| KRG92430 | Soybean | nucleus | 26.25 | 43.3 |
| KRH69048 | Soybean | nucleus | 25.94 | 43.23 |
| CDY10069 | Canola | nucleus | 24.69 | 42.93 |
| Solyc09g083280.2.1 | Tomato | nucleus | 26.25 | 42.86 |
| VIT_05s0020g04680.t01 | Wine grape | nucleus | 22.5 | 42.86 |
| Bra039732.1-P | Field mustard | nucleus | 22.81 | 42.69 |
| PGSC0003DMT400013662 | Potato | cytosol | 25.31 | 42.63 |
| PGSC0003DMT400015655 | Potato | nucleus | 25.94 | 42.56 |
| AT5G43700.1 | Thale cress | cytosol, extracellular, nucleus | 24.69 | 42.47 |
| CDY18213 | Canola | cytosol, nucleus, plastid | 24.69 | 42.47 |
| Solyc06g008580.2.1 | Tomato | nucleus | 25.0 | 42.11 |
| CDX89833 | Canola | cytosol, nucleus, plastid | 24.38 | 41.94 |
| Bra015297.1-P | Field mustard | cytosol, nucleus, plastid | 24.38 | 41.94 |
| Bra027504.1-P | Field mustard | nucleus | 25.0 | 41.88 |
| CDY32934 | Canola | cytosol, nucleus, plastid | 25.0 | 41.88 |
| KRH71338 | Soybean | nucleus | 26.25 | 41.58 |
| PGSC0003DMT400034978 | Potato | cytosol, mitochondrion, nucleus | 21.25 | 41.46 |
| CDY69497 | Canola | cytosol, nucleus, plastid | 24.69 | 41.36 |
| Zm00001d041418_P001 | Maize | nucleus | 29.38 | 40.87 |
| KRH32098 | Soybean | nucleus | 22.19 | 40.8 |
| KRH67288 | Soybean | nucleus | 25.94 | 40.29 |
| Zm00001d013707_P001 | Maize | nucleus | 27.81 | 39.73 |
| KRG95613 | Soybean | nucleus | 25.31 | 39.71 |
| Zm00001d030993_P001 | Maize | nucleus | 24.69 | 39.7 |
| Zm00001d033319_P001 | Maize | nucleus | 27.5 | 38.94 |
| Zm00001d036918_P001 | Maize | nucleus | 21.56 | 34.85 |
| Zm00001d013302_P002 | Maize | nucleus | 24.38 | 34.21 |
| Zm00001d039624_P001 | Maize | nucleus | 23.44 | 34.09 |
| Zm00001d033976_P002 | Maize | nucleus | 24.69 | 33.33 |
| Zm00001d037774_P001 | Maize | cytosol | 25.31 | 33.2 |
| AT3G23030.2 | Thale cress | vacuole | 26.56 | 32.57 |
| Zm00001d008749_P002 | Maize | cytosol | 21.56 | 31.51 |
| Zm00001d043878_P001 | Maize | nucleus, plastid | 25.31 | 30.11 |
| Zm00001d009532_P001 | Maize | nucleus | 25.0 | 28.47 |
| AT1G04240.2 | Thale cress | cytosol, endoplasmic reticulum, nucleus, plastid | 25.62 | 28.37 |
| Zm00001d038980_P001 | Maize | cytosol, nucleus, plastid | 25.0 | 27.68 |
| Zm00001d010411_P001 | Maize | cytosol, endoplasmic reticulum, nucleus | 25.94 | 25.23 |
| Zm00001d011588_P003 | Maize | nucleus, plastid | 24.38 | 22.87 |
| Zm00001d041416_P001 | Maize | nucleus | 24.06 | 22.38 |
| Zm00001d024008_P001 | Maize | mitochondrion | 19.38 | 17.82 |
Protein Annotations
| Gene3D:3.10.20.90 | MapMan:35.1 | UniProt:A0A1D6L7W5 | InterPro:AUX/IAA_dom | InterPro:AUX_IAA | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009719 | GO:GO:0009734 | GO:GO:0009987 | InterPro:IPR000270 |
| ProteinID:ONM10341.1 | ProteinID:ONM10342.1 | InterPro:PB1_dom | PFAM:PF02309 | PFscan:PS51745 | PANTHER:PTHR31734 |
| PANTHER:PTHR31734:SF14 | SUPFAM:SSF54277 | SignalP:SignalP-noTM | UniParc:UPI0008449334 | EnsemblPlantsGene:Zm00001d034463 | EnsemblPlants:Zm00001d034463_P001 |
| EnsemblPlants:Zm00001d034463_T001 | SEG:seg | : | : | : | : |
Description
Aux/IAA-transcription factor5 Aux/IAA-transcription factor5
Coordinates
chr1:-:293749001..293751779
Molecular Weight (calculated)
34473.1 Da
IEP (calculated)
9.577
GRAVY (calculated)
-0.291
Length
320 amino acids
Sequence
(BLAST)
(BLAST)
001: MARAALCIAL SLQLGRLDWC GARNATATSC NRFYIYAEPP RHATEQCKPS ILLTHVLPPA QLAIAVRLFS SRAPSSLVCD QRRRAASMEM IDAELRLGPP
101: GSNNSDVVVT VVPPAAARKP AAPAPASAAK RPSSSVVKSD DASGTGDHDD DAAPASKAAR DTPRTQLLYR ARSDQLMIGL VLVNERRRVR AVGWPPVRAY
201: RKNAFHAAAE AARRTNNKGE ELQGGGGRLY VKVSMDGAPY LRKVDLRTYG GYRELRDALD ALFGCFSSSS ASSSSADGGC QFAVAYEDKD GDLMLAGDVP
301: WEMFICSCKK LRIMRGSEAR
101: GSNNSDVVVT VVPPAAARKP AAPAPASAAK RPSSSVVKSD DASGTGDHDD DAAPASKAAR DTPRTQLLYR ARSDQLMIGL VLVNERRRVR AVGWPPVRAY
201: RKNAFHAAAE AARRTNNKGE ELQGGGGRLY VKVSMDGAPY LRKVDLRTYG GYRELRDALD ALFGCFSSSS ASSSSADGGC QFAVAYEDKD GDLMLAGDVP
301: WEMFICSCKK LRIMRGSEAR
001: MSVSVAAEHD YIGLSEFPTM EATTMSDKTK TRDNNNGLNF KATELRLGLP GSESPERVDS RFLALNKSSC PVSGAKRVFS DAINDSNKWV FSPGSTTATG
101: DVGSGSGPRT SVVKDGKSTT FTKPAVPVKE KKSSATAPAS KAQVVGWPPI RSFRKNSMAS SQSQKPGNNS ETEEAEAKSG PEQPCLYVKV SMEGAPYLRK
201: IDLKTYKSYL ELSSALEKMF SCFTIGQFGS HGGCGRDGLN ESRLTDLLRG SEYVVTYEDK DSDWMLVGDV PWEMFICSCK KLRIMKSSEA IGLAPRVMEK
301: CRSRN
101: DVGSGSGPRT SVVKDGKSTT FTKPAVPVKE KKSSATAPAS KAQVVGWPPI RSFRKNSMAS SQSQKPGNNS ETEEAEAKSG PEQPCLYVKV SMEGAPYLRK
201: IDLKTYKSYL ELSSALEKMF SCFTIGQFGS HGGCGRDGLN ESRLTDLLRG SEYVVTYEDK DSDWMLVGDV PWEMFICSCK KLRIMKSSEA IGLAPRVMEK
301: CRSRN
Arabidopsis Description
IAA27Auxin-responsive protein IAA27 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZSY8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.