Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH71338 | Soybean | nucleus | 91.38 | 78.71 |
| VIT_07s0141g00270.t01 | Wine grape | nucleus | 67.82 | 63.44 |
| KRH34375 | Soybean | cytosol, nucleus | 43.68 | 62.3 |
| KRG95613 | Soybean | nucleus | 71.26 | 60.78 |
| KRH67288 | Soybean | nucleus | 70.11 | 59.22 |
| GSMUA_Achr9P10690_001 | Banana | cytosol, mitochondrion, nucleus | 45.4 | 58.09 |
| KRH69048 | Soybean | nucleus | 58.62 | 53.12 |
| KRG92430 | Soybean | nucleus | 58.62 | 52.58 |
| GSMUA_Achr4P22530_001 | Banana | nucleus | 50.57 | 48.62 |
| GSMUA_Achr5P03110_001 | Banana | nucleus | 44.83 | 46.43 |
| GSMUA_Achr8P20620_001 | Banana | nucleus | 50.0 | 46.28 |
| GSMUA_Achr9P24330_001 | Banana | nucleus | 44.83 | 45.61 |
| GSMUA_Achr4P05200_001 | Banana | mitochondrion | 32.76 | 45.6 |
| GSMUA_Achr4P21030_001 | Banana | nucleus | 51.15 | 44.95 |
| GSMUA_Achr11P... | Banana | nucleus | 43.68 | 43.68 |
| GSMUA_Achr2P12630_001 | Banana | nucleus | 48.85 | 41.87 |
| EER98076 | Sorghum | cytosol, mitochondrion, nucleus | 47.13 | 41.21 |
| KRH09813 | Soybean | nucleus | 44.25 | 41.18 |
| TraesCS5D01G449400.1 | Wheat | nucleus | 42.53 | 40.88 |
| KRH23504 | Soybean | nucleus | 44.25 | 40.74 |
| TraesCS5B01G446100.1 | Wheat | cytosol, mitochondrion, nucleus | 41.38 | 40.68 |
| EER90734 | Sorghum | cytosol, nucleus, plastid | 43.1 | 40.32 |
| TraesCS5D01G069200.1 | Wheat | cytosol | 49.43 | 40.19 |
| TraesCS5A01G058700.1 | Wheat | cytosol | 49.43 | 40.19 |
| Os12t0601400-01 | Rice | nucleus | 45.4 | 40.1 |
| Zm00001d013071_P001 | Maize | nucleus | 41.38 | 39.78 |
| TraesCS5B01G058800.1 | Wheat | cytosol | 48.85 | 39.72 |
| Zm00001d030993_P001 | Maize | nucleus | 45.4 | 39.7 |
| KRH74730 | Soybean | plastid | 36.21 | 39.13 |
| KRH47514 | Soybean | nucleus | 41.95 | 39.04 |
| Zm00001d018973_P001 | Maize | nucleus | 44.83 | 38.61 |
| KRH44390 | Soybean | nucleus | 42.53 | 37.95 |
| TraesCS5D01G388200.1 | Wheat | nucleus | 46.55 | 37.67 |
| KRH71337 | Soybean | nucleus | 36.78 | 37.65 |
| KRH23505 | Soybean | nucleus | 39.08 | 37.16 |
| Os03t0797800-01 | Rice | nucleus | 41.95 | 37.06 |
| KRH09810 | Soybean | nucleus | 39.66 | 36.51 |
| TraesCS5A01G378200.1 | Wheat | nucleus | 44.25 | 36.32 |
| KRG92683 | Soybean | nucleus | 47.13 | 36.12 |
| KRG96977 | Soybean | nucleus | 47.7 | 36.09 |
| TraesCS5B01G381800.1 | Wheat | nucleus | 43.68 | 35.85 |
| EER93778 | Sorghum | cytosol, nucleus, plastid | 46.55 | 35.84 |
| Zm00001d013707_P001 | Maize | nucleus | 45.98 | 35.71 |
| KRH34091 | Soybean | cytosol, nucleus, plastid | 47.13 | 35.5 |
| KRH34377 | Soybean | nucleus | 48.28 | 35.15 |
| KRH68738 | Soybean | nucleus | 48.85 | 34.98 |
| Zm00001d041418_P001 | Maize | nucleus | 45.98 | 34.78 |
| Os07t0182400-01 | Rice | plastid | 43.68 | 34.7 |
| KRH32099 | Soybean | nucleus | 49.43 | 34.68 |
| KRG95616 | Soybean | nucleus | 49.43 | 34.13 |
| KRH67289 | Soybean | nucleus | 49.43 | 33.86 |
| Os03t0633800-01 | Rice | nucleus | 43.68 | 33.63 |
| EES16315 | Sorghum | cytosol | 47.13 | 33.61 |
| HORVU5Hr1G106350.2 | Barley | plastid | 42.53 | 32.89 |
| HORVU5Hr1G014290.1 | Barley | mitochondrion | 48.28 | 32.81 |
| Zm00001d033319_P001 | Maize | nucleus | 42.53 | 32.74 |
| KRH60250 | Soybean | nucleus | 48.85 | 29.62 |
| KRH23426 | Soybean | nucleus | 50.0 | 28.34 |
| KRH39325 | Soybean | nucleus | 48.28 | 27.36 |
| KRH09902 | Soybean | nucleus | 49.43 | 26.96 |
| HORVU5Hr1G093640.1 | Barley | mitochondrion | 48.28 | 26.75 |
| KRH75635 | Soybean | nucleus | 48.28 | 26.58 |
| KRH44313 | Soybean | nucleus | 48.28 | 26.09 |
| KRG92429 | Soybean | cytosol, nucleus, plastid | 48.85 | 25.68 |
| KRH47242 | Soybean | nucleus | 46.55 | 25.39 |
| KRH45470 | Soybean | nucleus | 48.28 | 24.0 |
| KRH41538 | Soybean | golgi, plasma membrane | 48.85 | 23.81 |
| KRH62157 | Soybean | nucleus | 48.85 | 23.61 |
| KRH16912 | Soybean | nucleus | 49.43 | 23.43 |
| KRH72523 | Soybean | nucleus | 48.85 | 23.22 |
| KRH39524 | Soybean | nucleus | 46.55 | 22.88 |
| KRH74432 | Soybean | nucleus | 47.13 | 22.84 |
| Zm00001d034463_P001 | Maize | extracellular, golgi | 40.8 | 22.19 |
| KRH52867 | Soybean | nucleus | 44.25 | 21.15 |
Protein Annotations
| Gene3D:3.10.20.90 | MapMan:35.1 | EMBL:ACUP02006095 | InterPro:AUX/IAA_dom | InterPro:AUX_IAA | EnsemblPlantsGene:GLYMA_10G031800 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0007154 | GO:GO:0007165 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009719 | GO:GO:0009734 | GO:GO:0009987 |
| InterPro:IPR000270 | UniProt:K7LH61 | EnsemblPlants:KRH32098 | ProteinID:KRH32098 | ProteinID:KRH32098.1 | InterPro:PB1_dom |
| PFAM:PF02309 | PFscan:PS51745 | PANTHER:PTHR31734 | PANTHER:PTHR31734:SF8 | SUPFAM:SSF54277 | UniParc:UPI000295640F |
Description
hypothetical protein
Coordinates
chr10:-:2768241..2770339
Molecular Weight (calculated)
19478.8 Da
IEP (calculated)
4.821
GRAVY (calculated)
-0.911
Length
174 amino acids
Sequence
(BLAST)
(BLAST)
001: MGKYEKELNL EATELRLGLP GSDEPGKRSI VRSNKRSSTE ASEEECISKG NMNSNGSDIT SDDQDNLVPP AKAQVVGWPP VRSYRKNTLQ QKKEEQGEGS
101: GMYVKVSMAG APYLRKIDLN VYKSYPELLK ALGNMFKCTF GEYSEREGYN GSEYAPTYED KDGDWMLVGD VPWK
101: GMYVKVSMAG APYLRKIDLN VYKSYPELLK ALGNMFKCTF GEYSEREGYN GSEYAPTYED KDGDWMLVGD VPWK
001: MDEFVNLKET ELRLGLPGTD NVCEAKERVS CCNNNNKRVL STDTEKEIES SSRKTETSPP RKAQIVGWPP VRSYRKNNIQ SKKNESEHEG QGIYVKVSMD
101: GAPYLRKIDL SCYKGYSELL KALEVMFKFS VGEYFERDGY KGSDFVPTYE DKDGDWMLIG DVPWEMFICT CKRLRIMKGS EAKGLGCGV
101: GAPYLRKIDL SCYKGYSELL KALEVMFKFS VGEYFERDGY KGSDFVPTYE DKDGDWMLIG DVPWEMFICT CKRLRIMKGS EAKGLGCGV
Arabidopsis Description
SHY2AUX/IAA transcriptional regulator family protein [Source:TAIR;Acc:AT1G04240]
SUBAcon: [plastid,nucleus,cytosol]
SUBAcon: [plastid,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.