Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH34375 | Soybean | cytosol, nucleus | 59.28 | 94.26 |
| KRH69048 | Soybean | nucleus | 71.65 | 72.4 |
| AT5G43700.1 | Thale cress | cytosol, extracellular, nucleus | 65.46 | 68.28 |
| CDX94876 | Canola | nucleus | 59.79 | 67.84 |
| VIT_05s0020g04680.t01 | Wine grape | nucleus | 58.25 | 67.26 |
| CDY32934 | Canola | cytosol, nucleus, plastid | 65.98 | 67.02 |
| Bra033890.1-P | Field mustard | nucleus | 58.76 | 66.28 |
| Bra001899.1-P | Field mustard | nucleus | 58.25 | 66.08 |
| CDX92972 | Canola | nucleus | 58.25 | 66.08 |
| AT4G14560.1 | Thale cress | nucleus | 57.22 | 66.07 |
| CDY10692 | Canola | nucleus | 58.25 | 65.7 |
| Bra023771.1-P | Field mustard | nucleus | 57.73 | 65.5 |
| CDY35493 | Canola | nucleus | 57.73 | 65.5 |
| CDY40837 | Canola | nucleus | 57.73 | 65.5 |
| Bra027504.1-P | Field mustard | nucleus | 64.43 | 65.44 |
| CDY69497 | Canola | cytosol, nucleus, plastid | 64.43 | 65.44 |
| CDY10346 | Canola | nucleus | 57.73 | 65.12 |
| PGSC0003DMT400042074 | Potato | cytosol, nucleus, plastid | 63.4 | 64.74 |
| Solyc06g053840.2.1 | Tomato | nucleus | 62.89 | 64.21 |
| KRH71338 | Soybean | nucleus | 65.46 | 62.87 |
| Solyc09g083280.2.1 | Tomato | nucleus | 63.4 | 62.76 |
| PGSC0003DMT400015655 | Potato | nucleus | 62.89 | 62.56 |
| Bra032521.1-P | Field mustard | nucleus | 57.73 | 62.22 |
| CDY36883 | Canola | nucleus | 55.15 | 62.21 |
| Bra015297.1-P | Field mustard | cytosol, nucleus, plastid | 59.28 | 61.83 |
| CDX89833 | Canola | cytosol, nucleus, plastid | 59.28 | 61.83 |
| CDY32536 | Canola | cytosol, nucleus, plastid | 57.22 | 61.67 |
| CDY10069 | Canola | nucleus | 58.25 | 61.41 |
| CDY18213 | Canola | cytosol, nucleus, plastid | 58.76 | 61.29 |
| GSMUA_Achr9P10690_001 | Banana | cytosol, mitochondrion, nucleus | 42.78 | 61.03 |
| CDY53735 | Canola | nucleus | 53.61 | 60.47 |
| Bra039732.1-P | Field mustard | nucleus | 53.09 | 60.23 |
| PGSC0003DMT400034978 | Potato | cytosol, mitochondrion, nucleus | 50.0 | 59.15 |
| Solyc04g054280.1.1 | Tomato | nucleus | 50.52 | 59.04 |
| GSMUA_Achr5P03110_001 | Banana | nucleus | 51.03 | 58.93 |
| KRH32098 | Soybean | nucleus | 52.58 | 58.62 |
| GSMUA_Achr9P24330_001 | Banana | nucleus | 50.52 | 57.31 |
| KRG95613 | Soybean | nucleus | 59.79 | 56.86 |
| GSMUA_Achr4P05200_001 | Banana | mitochondrion | 36.6 | 56.8 |
| GSMUA_Achr4P22530_001 | Banana | nucleus | 52.58 | 56.35 |
| KRH67288 | Soybean | nucleus | 59.79 | 56.31 |
| GSMUA_Achr4P21030_001 | Banana | nucleus | 56.7 | 55.56 |
| GSMUA_Achr11P... | Banana | nucleus | 48.97 | 54.6 |
| GSMUA_Achr8P20620_001 | Banana | nucleus | 52.58 | 54.26 |
| GSMUA_Achr2P12630_001 | Banana | nucleus | 56.19 | 53.69 |
| Os12t0601400-01 | Rice | nucleus | 48.97 | 48.22 |
| EER98076 | Sorghum | cytosol, mitochondrion, nucleus | 47.94 | 46.73 |
| TraesCS5A01G058700.1 | Wheat | cytosol | 50.52 | 45.79 |
| TraesCS5B01G058800.1 | Wheat | cytosol | 50.52 | 45.79 |
| TraesCS5D01G069200.1 | Wheat | cytosol | 50.52 | 45.79 |
| KRH23505 | Soybean | nucleus | 42.27 | 44.81 |
| TraesCS5D01G449400.1 | Wheat | nucleus | 41.75 | 44.75 |
| Zm00001d013071_P001 | Maize | nucleus | 41.75 | 44.75 |
| TraesCS5B01G446100.1 | Wheat | cytosol, mitochondrion, nucleus | 40.72 | 44.63 |
| EER90734 | Sorghum | cytosol, nucleus, plastid | 42.27 | 44.09 |
| Zm00001d018973_P001 | Maize | nucleus | 45.88 | 44.06 |
| KRH09810 | Soybean | nucleus | 42.27 | 43.39 |
| KRH09813 | Soybean | nucleus | 41.75 | 43.32 |
| KRH47514 | Soybean | nucleus | 41.75 | 43.32 |
| AT3G23030.2 | Thale cress | vacuole | 57.22 | 42.53 |
| KRH23504 | Soybean | nucleus | 41.24 | 42.33 |
| KRG92683 | Soybean | nucleus | 49.48 | 42.29 |
| KRH44390 | Soybean | nucleus | 42.27 | 42.05 |
| Zm00001d013707_P001 | Maize | nucleus | 48.45 | 41.96 |
| TraesCS5D01G388200.1 | Wheat | nucleus | 46.39 | 41.86 |
| Zm00001d041418_P001 | Maize | nucleus | 49.48 | 41.74 |
| AT1G04240.2 | Thale cress | cytosol, endoplasmic reticulum, nucleus, plastid | 61.34 | 41.18 |
| EER93778 | Sorghum | cytosol, nucleus, plastid | 47.94 | 41.15 |
| KRH34377 | Soybean | nucleus | 50.52 | 41.0 |
| Zm00001d030993_P001 | Maize | nucleus | 41.75 | 40.7 |
| Os03t0797800-01 | Rice | nucleus | 41.24 | 40.61 |
| TraesCS5A01G378200.1 | Wheat | nucleus | 44.33 | 40.57 |
| TraesCS5B01G381800.1 | Wheat | nucleus | 44.33 | 40.57 |
| Zm00001d033319_P001 | Maize | nucleus | 46.39 | 39.82 |
| EES16315 | Sorghum | cytosol | 50.0 | 39.75 |
| KRG95616 | Soybean | nucleus | 51.55 | 39.68 |
| KRG96977 | Soybean | nucleus | 46.91 | 39.57 |
| KRH68738 | Soybean | nucleus | 48.97 | 39.09 |
| Os03t0633800-01 | Rice | nucleus | 45.36 | 38.94 |
| KRH67289 | Soybean | nucleus | 50.52 | 38.58 |
| Os07t0182400-01 | Rice | plastid | 43.3 | 38.36 |
| KRH32099 | Soybean | nucleus | 48.97 | 38.31 |
| HORVU5Hr1G106350.2 | Barley | plastid | 42.78 | 36.89 |
| KRH34091 | Soybean | cytosol, nucleus, plastid | 43.81 | 36.8 |
| KRH74730 | Soybean | plastid | 28.87 | 34.78 |
| KRH60250 | Soybean | nucleus | 50.52 | 34.15 |
| KRH71337 | Soybean | nucleus | 29.9 | 34.12 |
| KRH23426 | Soybean | nucleus | 53.09 | 33.55 |
| KRH39325 | Soybean | nucleus | 52.58 | 33.22 |
| HORVU5Hr1G014290.1 | Barley | mitochondrion | 43.3 | 32.81 |
| KRH09902 | Soybean | nucleus | 53.09 | 32.29 |
| KRH75635 | Soybean | nucleus | 51.03 | 31.33 |
| KRH44313 | Soybean | nucleus | 50.52 | 30.43 |
| KRH47242 | Soybean | nucleus | 48.97 | 29.78 |
| KRG92429 | Soybean | cytosol, nucleus, plastid | 50.52 | 29.61 |
| KRH45470 | Soybean | nucleus | 53.09 | 29.43 |
| HORVU5Hr1G093640.1 | Barley | mitochondrion | 47.42 | 29.3 |
| KRH62157 | Soybean | nucleus | 51.55 | 27.78 |
| KRH39524 | Soybean | nucleus | 50.52 | 27.68 |
| KRH72523 | Soybean | nucleus | 52.06 | 27.6 |
| KRH41538 | Soybean | golgi, plasma membrane | 50.52 | 27.45 |
| KRH74432 | Soybean | nucleus | 50.52 | 27.3 |
| KRH16912 | Soybean | nucleus | 51.55 | 27.25 |
| Zm00001d034463_P001 | Maize | extracellular, golgi | 43.3 | 26.25 |
| KRH52867 | Soybean | nucleus | 47.42 | 25.27 |
Protein Annotations
| EntrezGene:100527777 | Gene3D:3.10.20.90 | MapMan:35.1 | EMBL:ACUP02012757 | InterPro:AUX/IAA_dom | InterPro:AUX_IAA |
| EnsemblPlantsGene:GLYMA_20G210500 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0007154 |
| GO:GO:0007165 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009719 | GO:GO:0009734 |
| GO:GO:0009987 | UniProt:I1NIA4 | InterPro:IPR000270 | EnsemblPlants:KRG92430 | ProteinID:KRG92430 | ProteinID:KRG92430.1 |
| InterPro:PB1_dom | PFAM:PF02309 | PFscan:PS51745 | PANTHER:PTHR31734 | PANTHER:PTHR31734:SF11 | SUPFAM:SSF54277 |
| UniParc:UPI00023DC27E | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr20:+:44681524..44683147
Molecular Weight (calculated)
21466.4 Da
IEP (calculated)
5.884
GRAVY (calculated)
-0.661
Length
194 amino acids
Sequence
(BLAST)
(BLAST)
001: MENTTVTYQT DLNLKATELR LGLPGTEESE EKTLSAGARI NNKRPLTETS DECASNGTSS APHEKTETAP PAKTKIVGWP PIRSYRKNSL QESEGAGIYV
101: KVSMDGAPYL RKIDLKVYGG YTQLLKSLEN MFKLTIGEHS EKEGYKGSDY APTYEDKDGD WMLVGDVPWD MFVTSCRRLR IMKGSEARGL GCAV
101: KVSMDGAPYL RKIDLKVYGG YTQLLKSLEN MFKLTIGEHS EKEGYKGSDY APTYEDKDGD WMLVGDVPWD MFVTSCRRLR IMKGSEARGL GCAV
001: MEKVDVYDEL VNLKATELRL GLPGTEETVS CGKSNKRVLP EATEKEIEST GKTETASPPK AQIVGWPPVR SYRKNNVQTK KSESEGQGNY VKVSMDGAPY
101: LRKIDLTMYK QYPELMKSLE NMFKFSVGEY FEREGYKGSD FVPTYEDKDG DWMLVGDVPW EMFVSSCKRL RIMKGSEVKG LGCGGL
101: LRKIDLTMYK QYPELMKSLE NMFKFSVGEY FEREGYKGSD FVPTYEDKDG DWMLVGDVPW EMFVSSCKRL RIMKGSEVKG LGCGGL
Arabidopsis Description
IAA4Auxin-responsive protein IAA4 [Source:UniProtKB/Swiss-Prot;Acc:P33077]
SUBAcon: [extracellular,nucleus,cytosol]
SUBAcon: [extracellular,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.