Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX92972 | Canola | nucleus | 97.08 | 97.08 |
| CDY40837 | Canola | nucleus | 96.49 | 96.49 |
| CDY35493 | Canola | nucleus | 96.49 | 96.49 |
| CDY10692 | Canola | nucleus | 95.32 | 94.77 |
| CDY10346 | Canola | nucleus | 94.74 | 94.19 |
| CDY36883 | Canola | nucleus | 78.36 | 77.91 |
| CDY53735 | Canola | nucleus | 77.19 | 76.74 |
| KRH34375 | Soybean | cytosol, nucleus | 52.63 | 73.77 |
| CDY32536 | Canola | cytosol, nucleus, plastid | 67.84 | 64.44 |
| CDY32934 | Canola | cytosol, nucleus, plastid | 69.59 | 62.3 |
| CDY10069 | Canola | nucleus | 66.08 | 61.41 |
| CDY69497 | Canola | cytosol, nucleus, plastid | 68.42 | 61.26 |
| KRH69048 | Soybean | nucleus | 67.84 | 60.42 |
| KRG92430 | Soybean | nucleus | 67.84 | 59.79 |
| CDX89833 | Canola | cytosol, nucleus, plastid | 64.91 | 59.68 |
| VIT_05s0020g04680.t01 | Wine grape | nucleus | 58.48 | 59.52 |
| PGSC0003DMT400042074 | Potato | cytosol, nucleus, plastid | 65.5 | 58.95 |
| CDY18213 | Canola | cytosol, nucleus, plastid | 63.74 | 58.6 |
| Solyc06g053840.2.1 | Tomato | nucleus | 64.91 | 58.42 |
| AT3G23030.2 | Thale cress | vacuole | 88.89 | 58.24 |
| Solyc09g083280.2.1 | Tomato | nucleus | 66.67 | 58.16 |
| GSMUA_Achr9P10690_001 | Banana | cytosol, mitochondrion, nucleus | 46.2 | 58.09 |
| PGSC0003DMT400015655 | Potato | nucleus | 66.08 | 57.95 |
| PGSC0003DMT400034978 | Potato | cytosol, mitochondrion, nucleus | 54.39 | 56.71 |
| Solyc04g054280.1.1 | Tomato | nucleus | 54.39 | 56.02 |
| GSMUA_Achr5P03110_001 | Banana | nucleus | 53.22 | 54.17 |
| GSMUA_Achr4P05200_001 | Banana | mitochondrion | 38.6 | 52.8 |
| GSMUA_Achr4P22530_001 | Banana | nucleus | 54.39 | 51.38 |
| GSMUA_Achr9P24330_001 | Banana | nucleus | 50.29 | 50.29 |
| GSMUA_Achr11P... | Banana | nucleus | 49.71 | 48.85 |
| GSMUA_Achr8P20620_001 | Banana | nucleus | 52.63 | 47.87 |
| CDY53305 | Canola | cytosol | 43.86 | 47.77 |
| GSMUA_Achr4P21030_001 | Banana | nucleus | 54.97 | 47.47 |
| GSMUA_Achr2P12630_001 | Banana | nucleus | 55.56 | 46.8 |
| Os12t0601400-01 | Rice | nucleus | 52.05 | 45.18 |
| Zm00001d013071_P001 | Maize | nucleus | 47.37 | 44.75 |
| TraesCS5D01G449400.1 | Wheat | nucleus | 46.78 | 44.2 |
| TraesCS5B01G446100.1 | Wheat | cytosol, mitochondrion, nucleus | 45.61 | 44.07 |
| TraesCS5D01G069200.1 | Wheat | cytosol | 54.97 | 43.93 |
| TraesCS5B01G058800.1 | Wheat | cytosol | 54.97 | 43.93 |
| TraesCS5A01G058700.1 | Wheat | cytosol | 54.97 | 43.93 |
| EER98076 | Sorghum | cytosol, mitochondrion, nucleus | 50.88 | 43.72 |
| EER90734 | Sorghum | cytosol, nucleus, plastid | 46.78 | 43.01 |
| CDX82428 | Canola | cytosol, nucleus, plastid | 48.54 | 42.78 |
| CDX75834 | Canola | cytosol, nucleus, plastid | 48.54 | 42.78 |
| CDY68807 | Canola | nucleus | 48.54 | 42.35 |
| CDY26042 | Canola | nucleus | 48.54 | 42.35 |
| CDY20135 | Canola | cytosol, nucleus, plastid | 47.95 | 41.62 |
| CDY21845 | Canola | cytosol, extracellular, nucleus | 47.95 | 41.62 |
| CDY10068 | Canola | cytosol, nucleus, plastid | 54.97 | 41.23 |
| CDY32537 | Canola | nucleus | 54.97 | 41.23 |
| Zm00001d018973_P001 | Maize | nucleus | 48.54 | 41.09 |
| CDX89832 | Canola | nucleus | 53.8 | 41.07 |
| CDY18214 | Canola | nucleus | 53.8 | 41.07 |
| CDY10694 | Canola | mitochondrion | 41.52 | 40.8 |
| CDY15493 | Canola | cytosol, nucleus, plastid | 54.39 | 40.61 |
| TraesCS5D01G388200.1 | Wheat | nucleus | 49.71 | 39.53 |
| CDY41894 | Canola | cytosol, nucleus, plastid | 53.22 | 39.39 |
| Zm00001d041418_P001 | Maize | nucleus | 52.63 | 39.13 |
| Os03t0797800-01 | Rice | nucleus | 45.03 | 39.09 |
| CDY21111 | Canola | cytosol, nucleus, plastid | 53.8 | 38.98 |
| CDY40881 | Canola | cytosol | 41.52 | 38.8 |
| CDY71748 | Canola | cytosol, nucleus, plastid | 39.18 | 38.73 |
| CDY47148 | Canola | nucleus | 52.63 | 38.63 |
| CDY53800 | Canola | nucleus | 42.11 | 38.3 |
| TraesCS5B01G381800.1 | Wheat | nucleus | 47.37 | 38.21 |
| TraesCS5A01G378200.1 | Wheat | nucleus | 47.37 | 38.21 |
| CDY62130 | Canola | cytosol, nucleus, plastid | 52.05 | 38.2 |
| CDY30017 | Canola | cytosol, nucleus, plastid | 52.63 | 37.97 |
| Zm00001d030993_P001 | Maize | nucleus | 43.86 | 37.69 |
| EER93778 | Sorghum | cytosol, nucleus, plastid | 49.71 | 37.61 |
| CDX92973 | Canola | cytosol, nucleus, plastid | 52.05 | 37.55 |
| Os03t0633800-01 | Rice | nucleus | 49.12 | 37.17 |
| EES16315 | Sorghum | cytosol | 52.63 | 36.89 |
| Zm00001d033319_P001 | Maize | nucleus | 48.54 | 36.73 |
| CDY30781 | Canola | cytosol, nucleus, plastid | 51.46 | 36.67 |
| CDY63910 | Canola | cytosol, nucleus, plastid | 51.46 | 36.67 |
| Zm00001d013707_P001 | Maize | nucleus | 47.95 | 36.61 |
| CDY50113 | Canola | cytosol, nucleus, plastid | 38.6 | 36.46 |
| CDY06836 | Canola | nucleus | 53.22 | 36.11 |
| Os07t0182400-01 | Rice | plastid | 45.61 | 35.62 |
| CDY10349 | Canola | endoplasmic reticulum, extracellular | 50.88 | 35.37 |
| HORVU5Hr1G106350.2 | Barley | plastid | 46.2 | 35.11 |
| CDY25617 | Canola | nucleus | 51.46 | 33.08 |
| CDX89499 | Canola | nucleus | 50.88 | 32.1 |
| CDY50750 | Canola | nucleus, plastid | 53.8 | 31.62 |
| HORVU5Hr1G014290.1 | Barley | mitochondrion | 46.78 | 31.25 |
| CDY68170 | Canola | nucleus, plastid | 53.8 | 29.58 |
| CDY37837 | Canola | mitochondrion | 50.88 | 29.39 |
| CDY18679 | Canola | plastid | 53.22 | 29.17 |
| CDY66936 | Canola | cytosol, nucleus, plastid | 45.61 | 28.26 |
| HORVU5Hr1G093640.1 | Barley | mitochondrion | 51.46 | 28.03 |
| CDY08767 | Canola | cytosol, nucleus, plastid | 52.05 | 26.81 |
| CDY45607 | Canola | cytosol, nucleus, plastid | 51.46 | 26.75 |
| Zm00001d034463_P001 | Maize | extracellular, golgi | 46.2 | 24.69 |
| CDY63072 | Canola | nucleus | 53.22 | 22.86 |
Protein Annotations
| Gene3D:3.10.20.90 | MapMan:35.1 | GO:A0A078E0A2 | InterPro:AUX/IAA_dom | InterPro:AUX_IAA | EnsemblPlants:CDX94876 |
| ProteinID:CDX94876 | ProteinID:CDX94876.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009719 |
| GO:GO:0009734 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00158418001 | InterPro:IPR000270 | InterPro:PB1_dom | PFAM:PF02309 |
| PFscan:PS51745 | PANTHER:PTHR31734 | PANTHER:PTHR31734:SF11 | SUPFAM:SSF54277 | UniParc:UPI0004EC9EB0 | : |
Description
BnaC03g43120D
Coordinates
chrLK031885:+:1096890..1097872
Molecular Weight (calculated)
19548.1 Da
IEP (calculated)
5.131
GRAVY (calculated)
-0.777
Length
171 amino acids
Sequence
(BLAST)
(BLAST)
001: MTYEKVNELN LKDTELRLGL PGTEQAKEEQ EVSCVRSNKR QLQSDNEEES TPPTKTQIVG WPPVRSYRKN NNSVSYVKVS MDGAPYLRKI DLKTYKNYPE
101: LLKALENMFK FTIGEYSERE GYKGSGVIPT YEDKDGDWML VGDVPWDMFS SSCKRLRIMK GSDALALDSA L
101: LLKALENMFK FTIGEYSERE GYKGSGVIPT YEDKDGDWML VGDVPWDMFS SSCKRLRIMK GSDALALDSA L
001: MGGLKLRVPL LSPCLFLAFH ASDNTSLSSF NPNFDAPLYI SLSPFLQNSS TSSPRTRTRR RRTRQEEQST QENTQEGNTK IDIDPKAMAY EKVNELNLKD
101: TELCLGLPGR TEKIKEEQEV SCVKSNNKRL FEETRDEEES TPPTKTQIVG WPPVRSSRKN NNSVSYVKVS MDGAPYLRKI DLKTYKNYPE LLKALENMFK
201: VMIGEYCERE GYKGSGFVPT YEDKDGDWML VGDVPWDMFS SSCKRLRIMK GSDAPALDSS L
101: TELCLGLPGR TEKIKEEQEV SCVKSNNKRL FEETRDEEES TPPTKTQIVG WPPVRSSRKN NNSVSYVKVS MDGAPYLRKI DLKTYKNYPE LLKALENMFK
201: VMIGEYCERE GYKGSGFVPT YEDKDGDWML VGDVPWDMFS SSCKRLRIMK GSDAPALDSS L
Arabidopsis Description
IAA2Auxin-responsive protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LQ54]
SUBAcon: [vacuole]
SUBAcon: [vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.