Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 1
- mitochondrion 1
- plastid 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
locusB | locations |
---|---|
CDX67912 | nucleus |
CDX68112 | |
CDX71968 | |
CDX73212 | |
CDX76680 | nucleus |
CDX80168 | |
CDX80545 | |
CDX80590 | |
CDX85931 | |
CDX87072 | |
CDX87307 | |
CDX87650 | |
CDX87863 | |
CDX88204 | |
CDX89163 | nucleus |
CDX89832 | |
CDX90899 | |
CDX90932 | |
CDY03088 | |
CDY06836 | |
CDY10068 | |
CDY11468 | nucleus |
CDY13521 | |
CDY15493 | |
CDY16034 | |
CDY17621 | |
CDY18013 | |
CDY18214 | |
CDY19790 | |
CDY21068 | |
CDY21896 | |
CDY21947 | |
CDY22060 | |
CDY22108 | |
CDY22876 | |
CDY25909 | |
CDY26594 | |
CDY27511 | |
CDY28523 | |
CDY31282 | |
CDY31545 | |
CDY32537 | |
CDY33844 | |
CDY34211 | |
CDY38297 | |
CDY39073 | |
CDY39982 | |
CDY46538 | |
CDY47946 | |
CDY48005 | |
CDY53439 | |
CDY53774 | |
CDY53998 | nucleus |
CDY61501 | |
CDY63072 | |
CDY68868 | nucleus |
Inferred from Arabidopsis experimental PPI
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
CDY30781 | Canola | cytosol, nucleus, plastid | 100.0 | 100.0 |
CDX92973 | Canola | cytosol, nucleus, plastid | 86.25 | 87.34 |
AT3G23050.1 | Thale cress | cytosol, nucleus, plastid | 87.92 | 86.83 |
CDY10694 | Canola | mitochondrion | 61.25 | 84.48 |
CDY10349 | Canola | endoplasmic reticulum, extracellular | 85.83 | 83.74 |
CDY62130 | Canola | cytosol, nucleus, plastid | 73.75 | 75.97 |
CDY47148 | Canola | nucleus | 73.33 | 75.54 |
KRH34377 | Soybean | nucleus | 70.42 | 70.71 |
VIT_05s0020g04690.t01 | Wine grape | cytosol, nucleus, plastid | 70.42 | 69.55 |
Solyc09g083290.2.1 | Tomato | nucleus | 66.25 | 67.37 |
PGSC0003DMT400015610 | Potato | nucleus | 65.83 | 66.39 |
CDY32537 | Canola | nucleus | 62.92 | 66.23 |
CDY10068 | Canola | cytosol, nucleus, plastid | 62.5 | 65.79 |
CDX89832 | Canola | nucleus | 61.25 | 65.62 |
CDY15493 | Canola | cytosol, nucleus, plastid | 62.5 | 65.5 |
CDY18214 | Canola | nucleus | 60.83 | 65.18 |
CDY41894 | Canola | cytosol, nucleus, plastid | 60.42 | 62.77 |
CDY21111 | Canola | cytosol, nucleus, plastid | 60.83 | 61.86 |
CDY30017 | Canola | cytosol, nucleus, plastid | 59.58 | 60.34 |
GSMUA_Achr8P20610_001 | Banana | nucleus | 60.0 | 59.02 |
GSMUA_Achr10P... | Banana | nucleus | 59.17 | 58.92 |
GSMUA_Achr9P25550_001 | Banana | nucleus | 58.75 | 58.02 |
GSMUA_Achr4P21020_001 | Banana | nucleus | 59.58 | 57.66 |
TraesCS5D01G069300.1 | Wheat | nucleus | 59.17 | 56.35 |
TraesCS5B01G058500.1 | Wheat | nucleus | 59.17 | 56.35 |
TraesCS5A01G058600.1 | Wheat | nucleus | 59.17 | 56.13 |
GSMUA_Achr9P10700_001 | Banana | nucleus | 56.25 | 56.02 |
TraesCS5D01G392000.1 | Wheat | nucleus | 51.67 | 53.45 |
Os03t0742900-01 | Rice | vacuole | 52.5 | 53.39 |
TraesCS5B01G386800.1 | Wheat | nucleus | 51.67 | 52.99 |
TraesCS5A01G382600.1 | Wheat | nucleus | 51.25 | 52.79 |
EER90896 | Sorghum | nucleus | 50.83 | 51.91 |
HORVU5Hr1G094220.1 | Barley | nucleus | 51.25 | 51.9 |
GSMUA_Achr4P22520_001 | Banana | nucleus | 54.58 | 51.78 |
Zm00001d033976_P002 | Maize | nucleus | 50.83 | 51.48 |
CDX94876 | Canola | nucleus | 36.67 | 51.46 |
HORVU5Hr1G014300.4 | Barley | nucleus | 59.17 | 51.45 |
KRG92429 | Soybean | cytosol, nucleus, plastid | 70.83 | 51.36 |
CDY32934 | Canola | cytosol, nucleus, plastid | 40.83 | 51.31 |
CDY69497 | Canola | cytosol, nucleus, plastid | 40.83 | 51.31 |
CDX92972 | Canola | nucleus | 36.25 | 50.88 |
CDY10692 | Canola | nucleus | 36.25 | 50.58 |
CDY32536 | Canola | cytosol, nucleus, plastid | 37.92 | 50.56 |
CDY50750 | Canola | nucleus, plastid | 61.25 | 50.52 |
CDY40837 | Canola | nucleus | 35.83 | 50.29 |
CDY35493 | Canola | nucleus | 35.83 | 50.29 |
CDY40881 | Canola | cytosol | 38.33 | 50.27 |
TraesCS5B01G381900.1 | Wheat | cytosol, mitochondrion, nucleus | 52.92 | 50.2 |
EES17334 | Sorghum | cytosol | 58.75 | 50.18 |
Zm00001d013302_P002 | Maize | nucleus | 47.5 | 50.0 |
CDY10069 | Canola | nucleus | 38.33 | 50.0 |
CDY10346 | Canola | nucleus | 35.83 | 50.0 |
CDX89833 | Canola | cytosol, nucleus, plastid | 38.75 | 50.0 |
Os12t0601300-01 | Rice | nucleus | 57.5 | 49.82 |
Os03t0633500-01 | Rice | cytosol | 48.33 | 49.79 |
CDY18213 | Canola | cytosol, nucleus, plastid | 38.33 | 49.46 |
CDY53305 | Canola | cytosol | 31.67 | 48.41 |
CDY36883 | Canola | nucleus | 34.58 | 48.26 |
OQU91311 | Sorghum | cytosol, mitochondrion, nucleus | 52.92 | 48.11 |
CDY53735 | Canola | nucleus | 34.17 | 47.67 |
CDX82428 | Canola | cytosol, nucleus, plastid | 37.5 | 46.39 |
CDY50113 | Canola | cytosol, nucleus, plastid | 34.58 | 45.86 |
CDX75834 | Canola | cytosol, nucleus, plastid | 36.67 | 45.36 |
CDY20135 | Canola | cytosol, nucleus, plastid | 35.83 | 43.65 |
CDY21845 | Canola | cytosol, extracellular, nucleus | 35.83 | 43.65 |
HORVU5Hr1G093580.2 | Barley | cytosol, nucleus, peroxisome | 50.0 | 42.7 |
CDY25617 | Canola | nucleus | 47.08 | 42.48 |
CDY06836 | Canola | nucleus | 44.58 | 42.46 |
CDY68807 | Canola | nucleus | 34.17 | 41.84 |
CDX89499 | Canola | nucleus | 46.25 | 40.96 |
CDY26042 | Canola | nucleus | 33.33 | 40.82 |
CDY71748 | Canola | cytosol, nucleus, plastid | 28.75 | 39.88 |
TraesCS5D01G388300.2 | Wheat | cytosol | 51.25 | 39.05 |
Zm00001d041416_P001 | Maize | nucleus | 55.0 | 38.37 |
CDY63072 | Canola | nucleus | 63.33 | 38.19 |
CDY37837 | Canola | mitochondrion | 47.08 | 38.18 |
CDY68170 | Canola | nucleus, plastid | 48.75 | 37.62 |
TraesCS5A01G378300.2 | Wheat | cytosol, mitochondrion, nucleus | 47.5 | 37.38 |
CDY18679 | Canola | plastid | 47.92 | 36.86 |
CDY53800 | Canola | nucleus | 28.75 | 36.7 |
CDY45607 | Canola | cytosol, nucleus, plastid | 48.33 | 35.26 |
CDY08767 | Canola | cytosol, nucleus, plastid | 48.33 | 34.94 |
CDY66936 | Canola | cytosol, nucleus, plastid | 39.58 | 34.42 |
Protein Annotations
Gene3D:3.10.20.90 | MapMan:35.1 | GO:A0A078GZ55 | UniProt:A0A078GZ55 | InterPro:AUX/IAA_dom | InterPro:AUX_IAA |
ProteinID:CDY30781.1 | EnsemblPlants:CDY63910 | ProteinID:CDY63910 | ProteinID:CDY63910.1 | GO:GO:0003674 | GO:GO:0005488 |
GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
GO:GO:0006351 | GO:GO:0006355 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0008152 |
GO:GO:0009058 | GO:GO:0009719 | GO:GO:0009734 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00039733001 | InterPro:IPR000270 |
InterPro:PB1_dom | PFAM:PF02309 | PFscan:PS51745 | PANTHER:PTHR31734 | PANTHER:PTHR31734:SF89 | SUPFAM:SSF54277 |
UniParc:UPI0004EECCE5 | SEG:seg | : | : | : | : |
Description
BnaC01g43640DAuxin-responsive protein [Source:UniProtKB/TrEMBL;Acc:A0A078GZ55]
Coordinates
chrLK034366:-:29214..31361
Molecular Weight (calculated)
26223.6 Da
IEP (calculated)
9.427
GRAVY (calculated)
-0.499
Length
240 amino acids
Sequence
(BLAST)
(BLAST)
001: MIGQLMNLKA TELCLSLPGG AETLDTPAKS AVGNKRGFSE TVDLMLNLQS NKERAIDLNN ATASKQKTLL KDPVKPPAKA QVVGWPPVRN YRKNIMTNQK
101: TSGADEASSE KAGNGGGGAT GATLVKVSMD GAPYLRKVHL KMYKSYQDLS DALAKMFSSF TMGNYGAQGM IDFMNETKLM DLNSSEYVPS YEDKDGDWMP
201: VGDVPWEMFV ESCKRLRIMK GSEAIGLAPR AMEKYSKNRS
101: TSGADEASSE KAGNGGGGAT GATLVKVSMD GAPYLRKVHL KMYKSYQDLS DALAKMFSSF TMGNYGAQGM IDFMNETKLM DLNSSEYVPS YEDKDGDWMP
201: VGDVPWEMFV ESCKRLRIMK GSEAIGLAPR AMEKYSKNRS
001: MIGQLMNLKA TELCLGLPGG AEAVESPAKS AVGSKRGFSE TVDLMLNLQS NKEGSVDLKN VSAVPKEKTT LKDPSKPPAK AQVVGWPPVR NYRKNMMTQQ
101: KTSSGAEEAS SEKAGNFGGG AAGAGLVKVS MDGAPYLRKV DLKMYKSYQD LSDALAKMFS SFTMGNYGAQ GMIDFMNESK LMNLLNSSEY VPSYEDKDGD
201: WMLVGDVPWE MFVESCKRLR IMKGSEAVGL APRAMEKYCK NRS
101: KTSSGAEEAS SEKAGNFGGG AAGAGLVKVS MDGAPYLRKV DLKMYKSYQD LSDALAKMFS SFTMGNYGAQ GMIDFMNESK LMNLLNSSEY VPSYEDKDGD
201: WMLVGDVPWE MFVESCKRLR IMKGSEAVGL APRAMEKYCK NRS
Arabidopsis Description
IAA7Auxin-responsive protein IAA7 [Source:UniProtKB/Swiss-Prot;Acc:Q38825]
SUBAcon: [plastid,nucleus,cytosol]
SUBAcon: [plastid,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.