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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid, nucleus, cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 1
  • mitochondrion 1
  • plastid 1
PPI

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT3G23050.1 CDX89832 AT1G04250.1 21734647
AT3G23050.1 CDY10068 AT1G04250.1 21734647
AT3G23050.1 CDY15493 AT1G04250.1 21734647
AT3G23050.1 CDY18214 AT1G04250.1 21734647
AT3G23050.1 CDY32537 AT1G04250.1 21734647
AT3G23050.1 CDY63072 AT1G04250.1 21734647
AT3G23050.1 CDX71968 AT1G12820.1 15992545
AT3G23050.1 CDY16034 AT1G12820.1 15992545
AT3G23050.1 CDY21068 AT1G12820.1 15992545
AT3G23050.1 CDY26594 AT1G12820.1 15992545
AT3G23050.1 CDY31282 AT1G12820.1 15992545
AT3G23050.1 CDX87863 AT1G51950.1 21734647
AT3G23050.1 CDY22876 AT1G51950.1 21734647
AT3G23050.1 CDY33844 AT1G51950.1 21734647
AT3G23050.1 CDY46538 AT1G51950.1 21734647
AT3G23050.1 CDY53439 AT1G51950.1 21734647
AT3G23050.1 CDX68112 AT1G75950.1 15208392
AT3G23050.1 CDX73212 AT1G75950.1 15208392
AT3G23050.1 CDX80590 AT1G75950.1 15208392
AT3G23050.1 CDX85931 AT1G75950.1 15208392
AT3G23050.1 CDX87650 AT1G75950.1 15208392
AT3G23050.1 CDY13521 AT1G75950.1 15208392
AT3G23050.1 CDY39073 AT1G75950.1 15208392
AT3G23050.1 CDX87307 AT1G80390.1 21734647
AT3G23050.1 CDY39982 AT1G80390.1 21734647
AT3G23050.1 CDY03088 AT2G01950.1 19000166
AT3G23050.1 CDY17621 AT2G01950.1 19000166
AT3G23050.1 CDY27511 AT2G46990.1 21734647
AT3G23050.1 CDY48005 AT2G46990.1 21734647
AT3G23050.1 CDY28523 AT3G26810.1 15992545
AT3G23050.1 CDY34211 AT3G26810.1 15992545
AT3G23050.1 CDX67912 AT3G62980.1 11713520
AT3G23050.1 CDX76680 AT3G62980.1 11713520
AT3G23050.1 CDX89163 AT3G62980.1 11713520
AT3G23050.1 CDY11468 AT3G62980.1 11713520
AT3G23050.1 CDY53998 AT3G62980.1 11713520
AT3G23050.1 CDY68868 AT3G62980.1 11713520
AT3G23050.1 CDX67912 AT3G62980.1 22912871
AT3G23050.1 CDX76680 AT3G62980.1 22912871
AT3G23050.1 CDX89163 AT3G62980.1 22912871
AT3G23050.1 CDY11468 AT3G62980.1 22912871
AT3G23050.1 CDY53998 AT3G62980.1 22912871
AT3G23050.1 CDY68868 AT3G62980.1 22912871
AT3G23050.1 CDX67912 AT3G62980.1 22912871
AT3G23050.1 CDX76680 AT3G62980.1 22912871
AT3G23050.1 CDX89163 AT3G62980.1 22912871
AT3G23050.1 CDY11468 AT3G62980.1 22912871
AT3G23050.1 CDY53998 AT3G62980.1 22912871
AT3G23050.1 CDY68868 AT3G62980.1 22912871
AT3G23050.1 CDX90932 AT4G02570.1 11713520
AT3G23050.1 CDY18013 AT4G02570.1 11713520
AT3G23050.1 CDY21896 AT4G02570.1 11713520
AT3G23050.1 CDY22060 AT4G02570.1 11713520
AT3G23050.1 CDX90932 AT4G02570.1 12839993
AT3G23050.1 CDY18013 AT4G02570.1 12839993
AT3G23050.1 CDY21896 AT4G02570.1 12839993
AT3G23050.1 CDY22060 AT4G02570.1 12839993
AT3G23050.1 CDX90932 AT4G02570.1 15208392
AT3G23050.1 CDY18013 AT4G02570.1 15208392
AT3G23050.1 CDY21896 AT4G02570.1 15208392
AT3G23050.1 CDY22060 AT4G02570.1 15208392
AT3G23050.1 CDX90932 AT4G02570.1 18550827
AT3G23050.1 CDY18013 AT4G02570.1 18550827
AT3G23050.1 CDY21896 AT4G02570.1 18550827
AT3G23050.1 CDY22060 AT4G02570.1 18550827
AT3G23050.1 CDX90899 AT4G03190.1 15992545
AT3G23050.1 CDY21947 AT4G03190.1 15992545
AT3G23050.1 CDY22108 AT4G03190.1 15992545
AT3G23050.1 CDY53774 AT4G03190.1 15992545
AT3G23050.1 CDY06836 AT4G29080.1 21734647
AT3G23050.1 CDX80545 AT5G25890.1 21734647
AT3G23050.1 CDX87072 AT5G25890.1 21734647
AT3G23050.1 CDX88204 AT5G25890.1 21734647
AT3G23050.1 CDY19790 AT5G25890.1 21734647
AT3G23050.1 CDX80545 AT5G25890.1 21798944
AT3G23050.1 CDX87072 AT5G25890.1 21798944
AT3G23050.1 CDX88204 AT5G25890.1 21798944
AT3G23050.1 CDY19790 AT5G25890.1 21798944
AT3G23050.1 CDY25909 AT5G57420.1 21734647
AT3G23050.1 CDY38297 AT5G57420.1 21734647
AT3G23050.1 CDY47946 AT5G57420.1 21734647
AT3G23050.1 CDY61501 AT5G57420.1 21734647
AT3G23050.1 CDX80168 AT5G60450.1 21734647
AT3G23050.1 CDY31545 AT5G60450.1 21734647
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY30781 Canola cytosol, nucleus, plastid 100.0 100.0
CDX92973 Canola cytosol, nucleus, plastid 86.25 87.34
AT3G23050.1 Thale cress cytosol, nucleus, plastid 87.92 86.83
CDY10694 Canola mitochondrion 61.25 84.48
CDY10349 Canola endoplasmic reticulum, extracellular 85.83 83.74
CDY62130 Canola cytosol, nucleus, plastid 73.75 75.97
CDY47148 Canola nucleus 73.33 75.54
KRH34377 Soybean nucleus 70.42 70.71
VIT_05s0020g04690.t01 Wine grape cytosol, nucleus, plastid 70.42 69.55
Solyc09g083290.2.1 Tomato nucleus 66.25 67.37
PGSC0003DMT400015610 Potato nucleus 65.83 66.39
CDY32537 Canola nucleus 62.92 66.23
CDY10068 Canola cytosol, nucleus, plastid 62.5 65.79
CDX89832 Canola nucleus 61.25 65.62
CDY15493 Canola cytosol, nucleus, plastid 62.5 65.5
CDY18214 Canola nucleus 60.83 65.18
CDY41894 Canola cytosol, nucleus, plastid 60.42 62.77
CDY21111 Canola cytosol, nucleus, plastid 60.83 61.86
CDY30017 Canola cytosol, nucleus, plastid 59.58 60.34
GSMUA_Achr8P20610_001 Banana nucleus 60.0 59.02
GSMUA_Achr10P... Banana nucleus 59.17 58.92
GSMUA_Achr9P25550_001 Banana nucleus 58.75 58.02
GSMUA_Achr4P21020_001 Banana nucleus 59.58 57.66
TraesCS5D01G069300.1 Wheat nucleus 59.17 56.35
TraesCS5B01G058500.1 Wheat nucleus 59.17 56.35
TraesCS5A01G058600.1 Wheat nucleus 59.17 56.13
GSMUA_Achr9P10700_001 Banana nucleus 56.25 56.02
TraesCS5D01G392000.1 Wheat nucleus 51.67 53.45
Os03t0742900-01 Rice vacuole 52.5 53.39
TraesCS5B01G386800.1 Wheat nucleus 51.67 52.99
TraesCS5A01G382600.1 Wheat nucleus 51.25 52.79
EER90896 Sorghum nucleus 50.83 51.91
HORVU5Hr1G094220.1 Barley nucleus 51.25 51.9
GSMUA_Achr4P22520_001 Banana nucleus 54.58 51.78
Zm00001d033976_P002 Maize nucleus 50.83 51.48
CDX94876 Canola nucleus 36.67 51.46
HORVU5Hr1G014300.4 Barley nucleus 59.17 51.45
KRG92429 Soybean cytosol, nucleus, plastid 70.83 51.36
CDY32934 Canola cytosol, nucleus, plastid 40.83 51.31
CDY69497 Canola cytosol, nucleus, plastid 40.83 51.31
CDX92972 Canola nucleus 36.25 50.88
CDY10692 Canola nucleus 36.25 50.58
CDY32536 Canola cytosol, nucleus, plastid 37.92 50.56
CDY50750 Canola nucleus, plastid 61.25 50.52
CDY40837 Canola nucleus 35.83 50.29
CDY35493 Canola nucleus 35.83 50.29
CDY40881 Canola cytosol 38.33 50.27
TraesCS5B01G381900.1 Wheat cytosol, mitochondrion, nucleus 52.92 50.2
EES17334 Sorghum cytosol 58.75 50.18
Zm00001d013302_P002 Maize nucleus 47.5 50.0
CDY10069 Canola nucleus 38.33 50.0
CDY10346 Canola nucleus 35.83 50.0
CDX89833 Canola cytosol, nucleus, plastid 38.75 50.0
Os12t0601300-01 Rice nucleus 57.5 49.82
Os03t0633500-01 Rice cytosol 48.33 49.79
CDY18213 Canola cytosol, nucleus, plastid 38.33 49.46
CDY53305 Canola cytosol 31.67 48.41
CDY36883 Canola nucleus 34.58 48.26
OQU91311 Sorghum cytosol, mitochondrion, nucleus 52.92 48.11
CDY53735 Canola nucleus 34.17 47.67
CDX82428 Canola cytosol, nucleus, plastid 37.5 46.39
CDY50113 Canola cytosol, nucleus, plastid 34.58 45.86
CDX75834 Canola cytosol, nucleus, plastid 36.67 45.36
CDY20135 Canola cytosol, nucleus, plastid 35.83 43.65
CDY21845 Canola cytosol, extracellular, nucleus 35.83 43.65
HORVU5Hr1G093580.2 Barley cytosol, nucleus, peroxisome 50.0 42.7
CDY25617 Canola nucleus 47.08 42.48
CDY06836 Canola nucleus 44.58 42.46
CDY68807 Canola nucleus 34.17 41.84
CDX89499 Canola nucleus 46.25 40.96
CDY26042 Canola nucleus 33.33 40.82
CDY71748 Canola cytosol, nucleus, plastid 28.75 39.88
TraesCS5D01G388300.2 Wheat cytosol 51.25 39.05
Zm00001d041416_P001 Maize nucleus 55.0 38.37
CDY63072 Canola nucleus 63.33 38.19
CDY37837 Canola mitochondrion 47.08 38.18
CDY68170 Canola nucleus, plastid 48.75 37.62
TraesCS5A01G378300.2 Wheat cytosol, mitochondrion, nucleus 47.5 37.38
CDY18679 Canola plastid 47.92 36.86
CDY53800 Canola nucleus 28.75 36.7
CDY45607 Canola cytosol, nucleus, plastid 48.33 35.26
CDY08767 Canola cytosol, nucleus, plastid 48.33 34.94
CDY66936 Canola cytosol, nucleus, plastid 39.58 34.42
Protein Annotations
Gene3D:3.10.20.90MapMan:35.1GO:A0A078GZ55UniProt:A0A078GZ55InterPro:AUX/IAA_domInterPro:AUX_IAA
ProteinID:CDY30781.1EnsemblPlants:CDY63910ProteinID:CDY63910ProteinID:CDY63910.1GO:GO:0003674GO:GO:0005488
GO:GO:0005515GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005634GO:GO:0006139
GO:GO:0006351GO:GO:0006355GO:GO:0007154GO:GO:0007165GO:GO:0008150GO:GO:0008152
GO:GO:0009058GO:GO:0009719GO:GO:0009734GO:GO:0009987EnsemblPlantsGene:GSBRNA2T00039733001InterPro:IPR000270
InterPro:PB1_domPFAM:PF02309PFscan:PS51745PANTHER:PTHR31734PANTHER:PTHR31734:SF89SUPFAM:SSF54277
UniParc:UPI0004EECCE5SEG:seg::::
Description
BnaC01g43640DAuxin-responsive protein [Source:UniProtKB/TrEMBL;Acc:A0A078GZ55]
Coordinates
chrLK034366:-:29214..31361
Molecular Weight (calculated)
26223.6 Da
IEP (calculated)
9.427
GRAVY (calculated)
-0.499
Length
240 amino acids
Sequence
(BLAST)
001: MIGQLMNLKA TELCLSLPGG AETLDTPAKS AVGNKRGFSE TVDLMLNLQS NKERAIDLNN ATASKQKTLL KDPVKPPAKA QVVGWPPVRN YRKNIMTNQK
101: TSGADEASSE KAGNGGGGAT GATLVKVSMD GAPYLRKVHL KMYKSYQDLS DALAKMFSSF TMGNYGAQGM IDFMNETKLM DLNSSEYVPS YEDKDGDWMP
201: VGDVPWEMFV ESCKRLRIMK GSEAIGLAPR AMEKYSKNRS
Best Arabidopsis Sequence Match ( AT3G23050.1 )
(BLAST)
001: MIGQLMNLKA TELCLGLPGG AEAVESPAKS AVGSKRGFSE TVDLMLNLQS NKEGSVDLKN VSAVPKEKTT LKDPSKPPAK AQVVGWPPVR NYRKNMMTQQ
101: KTSSGAEEAS SEKAGNFGGG AAGAGLVKVS MDGAPYLRKV DLKMYKSYQD LSDALAKMFS SFTMGNYGAQ GMIDFMNESK LMNLLNSSEY VPSYEDKDGD
201: WMLVGDVPWE MFVESCKRLR IMKGSEAVGL APRAMEKYCK NRS
Arabidopsis Description
IAA7Auxin-responsive protein IAA7 [Source:UniProtKB/Swiss-Prot;Acc:Q38825]
SUBAcon: [plastid,nucleus,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.