Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY10692 | Canola | nucleus | 99.42 | 99.42 |
| Bra033890.1-P | Field mustard | nucleus | 98.84 | 98.84 |
| CDX94876 | Canola | nucleus | 94.19 | 94.74 |
| CDY40837 | Canola | nucleus | 93.6 | 94.15 |
| CDY35493 | Canola | nucleus | 93.6 | 94.15 |
| CDX92972 | Canola | nucleus | 93.02 | 93.57 |
| CDY36883 | Canola | nucleus | 77.91 | 77.91 |
| CDY53735 | Canola | nucleus | 76.74 | 76.74 |
| KRH34375 | Soybean | cytosol, nucleus | 50.58 | 71.31 |
| CDY32536 | Canola | cytosol, nucleus, plastid | 66.86 | 63.89 |
| CDY10069 | Canola | nucleus | 66.28 | 61.96 |
| CDY32934 | Canola | cytosol, nucleus, plastid | 67.44 | 60.73 |
| CDY69497 | Canola | cytosol, nucleus, plastid | 66.28 | 59.69 |
| CDX89833 | Canola | cytosol, nucleus, plastid | 63.37 | 58.6 |
| VIT_05s0020g04680.t01 | Wine grape | nucleus | 56.98 | 58.33 |
| KRH69048 | Soybean | nucleus | 64.53 | 57.81 |
| KRG92430 | Soybean | nucleus | 65.12 | 57.73 |
| CDY18213 | Canola | cytosol, nucleus, plastid | 62.21 | 57.53 |
| PGSC0003DMT400042074 | Potato | cytosol, nucleus, plastid | 63.37 | 57.37 |
| AT3G23030.2 | Thale cress | vacuole | 86.63 | 57.09 |
| Solyc06g053840.2.1 | Tomato | nucleus | 62.79 | 56.84 |
| Solyc09g083280.2.1 | Tomato | nucleus | 64.53 | 56.63 |
| GSMUA_Achr9P10690_001 | Banana | cytosol, mitochondrion, nucleus | 44.77 | 56.62 |
| PGSC0003DMT400015655 | Potato | nucleus | 63.95 | 56.41 |
| PGSC0003DMT400034978 | Potato | cytosol, mitochondrion, nucleus | 51.74 | 54.27 |
| Solyc04g054280.1.1 | Tomato | nucleus | 52.33 | 54.22 |
| GSMUA_Achr5P03110_001 | Banana | nucleus | 51.74 | 52.98 |
| GSMUA_Achr4P05200_001 | Banana | mitochondrion | 37.21 | 51.2 |
| GSMUA_Achr4P22530_001 | Banana | nucleus | 53.49 | 50.83 |
| GSMUA_Achr9P24330_001 | Banana | nucleus | 48.84 | 49.12 |
| CDY53305 | Canola | cytosol | 44.77 | 49.04 |
| GSMUA_Achr11P... | Banana | nucleus | 48.26 | 47.7 |
| GSMUA_Achr8P20620_001 | Banana | nucleus | 51.16 | 46.81 |
| GSMUA_Achr4P21030_001 | Banana | nucleus | 53.49 | 46.46 |
| GSMUA_Achr2P12630_001 | Banana | nucleus | 53.49 | 45.32 |
| Os12t0601400-01 | Rice | nucleus | 50.0 | 43.65 |
| Zm00001d013071_P001 | Maize | nucleus | 45.93 | 43.65 |
| TraesCS5B01G446100.1 | Wheat | cytosol, mitochondrion, nucleus | 44.77 | 43.5 |
| TraesCS5D01G449400.1 | Wheat | nucleus | 45.35 | 43.09 |
| TraesCS5B01G058800.1 | Wheat | cytosol | 53.49 | 42.99 |
| TraesCS5A01G058700.1 | Wheat | cytosol | 53.49 | 42.99 |
| TraesCS5D01G069200.1 | Wheat | cytosol | 53.49 | 42.99 |
| CDY26042 | Canola | nucleus | 48.84 | 42.86 |
| CDY68807 | Canola | nucleus | 48.84 | 42.86 |
| EER98076 | Sorghum | cytosol, mitochondrion, nucleus | 49.42 | 42.71 |
| CDX75834 | Canola | cytosol, nucleus, plastid | 47.67 | 42.27 |
| CDX82428 | Canola | cytosol, nucleus, plastid | 47.67 | 42.27 |
| EER90734 | Sorghum | cytosol, nucleus, plastid | 45.35 | 41.94 |
| CDY20135 | Canola | cytosol, nucleus, plastid | 47.67 | 41.62 |
| CDY21845 | Canola | cytosol, extracellular, nucleus | 47.67 | 41.62 |
| CDY32537 | Canola | nucleus | 54.07 | 40.79 |
| CDY10068 | Canola | cytosol, nucleus, plastid | 54.07 | 40.79 |
| CDX89832 | Canola | nucleus | 52.91 | 40.62 |
| CDY18214 | Canola | nucleus | 52.91 | 40.62 |
| CDY10694 | Canola | mitochondrion | 40.7 | 40.23 |
| CDY15493 | Canola | cytosol, nucleus, plastid | 53.49 | 40.17 |
| Zm00001d018973_P001 | Maize | nucleus | 47.09 | 40.1 |
| CDY41894 | Canola | cytosol, nucleus, plastid | 52.91 | 39.39 |
| CDY53800 | Canola | nucleus | 42.44 | 38.83 |
| CDY71748 | Canola | cytosol, nucleus, plastid | 38.95 | 38.73 |
| CDY21111 | Canola | cytosol, nucleus, plastid | 52.91 | 38.56 |
| CDY40881 | Canola | cytosol | 40.7 | 38.25 |
| CDY47148 | Canola | nucleus | 51.74 | 38.2 |
| TraesCS5D01G388200.1 | Wheat | nucleus | 47.67 | 38.14 |
| Os03t0797800-01 | Rice | nucleus | 43.6 | 38.07 |
| CDY30017 | Canola | cytosol, nucleus, plastid | 52.33 | 37.97 |
| Zm00001d041418_P001 | Maize | nucleus | 50.58 | 37.83 |
| CDY62130 | Canola | cytosol, nucleus, plastid | 51.16 | 37.77 |
| CDX92973 | Canola | cytosol, nucleus, plastid | 51.16 | 37.13 |
| TraesCS5B01G381800.1 | Wheat | nucleus | 45.35 | 36.79 |
| TraesCS5A01G378200.1 | Wheat | nucleus | 45.35 | 36.79 |
| Os03t0633800-01 | Rice | nucleus | 48.26 | 36.73 |
| EER93778 | Sorghum | cytosol, nucleus, plastid | 48.26 | 36.73 |
| Zm00001d030993_P001 | Maize | nucleus | 41.86 | 36.18 |
| Zm00001d033319_P001 | Maize | nucleus | 47.09 | 35.84 |
| CDY63910 | Canola | cytosol, nucleus, plastid | 50.0 | 35.83 |
| CDY30781 | Canola | cytosol, nucleus, plastid | 50.0 | 35.83 |
| Zm00001d013707_P001 | Maize | nucleus | 46.51 | 35.71 |
| CDY06836 | Canola | nucleus | 52.33 | 35.71 |
| EES16315 | Sorghum | cytosol | 50.58 | 35.66 |
| CDY50113 | Canola | cytosol, nucleus, plastid | 37.21 | 35.36 |
| Os07t0182400-01 | Rice | plastid | 44.19 | 34.7 |
| CDY10349 | Canola | endoplasmic reticulum, extracellular | 49.42 | 34.55 |
| HORVU5Hr1G106350.2 | Barley | plastid | 44.77 | 34.22 |
| CDY25617 | Canola | nucleus | 50.58 | 32.71 |
| CDX89499 | Canola | nucleus | 50.0 | 31.73 |
| CDY50750 | Canola | nucleus, plastid | 52.91 | 31.27 |
| HORVU5Hr1G014290.1 | Barley | mitochondrion | 45.35 | 30.47 |
| CDY68170 | Canola | nucleus, plastid | 52.91 | 29.26 |
| CDY37837 | Canola | mitochondrion | 50.0 | 29.05 |
| CDY18679 | Canola | plastid | 52.33 | 28.85 |
| CDY66936 | Canola | cytosol, nucleus, plastid | 44.77 | 27.9 |
| HORVU5Hr1G093640.1 | Barley | mitochondrion | 49.42 | 27.07 |
| CDY08767 | Canola | cytosol, nucleus, plastid | 51.16 | 26.51 |
| CDY45607 | Canola | cytosol, nucleus, plastid | 50.58 | 26.44 |
| Zm00001d034463_P001 | Maize | extracellular, golgi | 44.77 | 24.06 |
| CDY63072 | Canola | nucleus | 52.33 | 22.61 |
Protein Annotations
| Gene3D:3.10.20.90 | MapMan:35.1 | GO:A0A078FAA5 | UniProt:A0A078FAA5 | InterPro:AUX/IAA_dom | InterPro:AUX_IAA |
| EnsemblPlants:CDY10346 | ProteinID:CDY10346 | ProteinID:CDY10346.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009719 | GO:GO:0009734 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00032233001 | InterPro:IPR000270 | InterPro:PB1_dom |
| PFAM:PF02309 | PFscan:PS51745 | PANTHER:PTHR31734 | PANTHER:PTHR31734:SF11 | SUPFAM:SSF54277 | UniParc:UPI0004EAFD0C |
| SEG:seg | : | : | : | : | : |
Description
BnaC05g29330DAuxin-responsive protein [Source:UniProtKB/TrEMBL;Acc:A0A078FAA5]
Coordinates
chrLK032002:-:805316..806238
Molecular Weight (calculated)
19656.2 Da
IEP (calculated)
6.036
GRAVY (calculated)
-0.807
Length
172 amino acids
Sequence
(BLAST)
(BLAST)
001: MAYEKVNELN LKDTELRLGL PGTGQVKEEQ EVSCVRSNKR QHQSDNEEES TPPTKTQIVG WPPVRSYRKN NNSVVSYVKV SKDGAPYLRK IDLKTYKNYS
101: ELLKELENMF KFTIGEYSER EGYRGSGVVP TYEDKDGDWM LVGDVPWDMF SSSCKRLRIM KGSDALALDS AL
101: ELLKELENMF KFTIGEYSER EGYRGSGVVP TYEDKDGDWM LVGDVPWDMF SSSCKRLRIM KGSDALALDS AL
001: MDEFVNLKET ELRLGLPGTD NVCEAKERVS CCNNNNKRVL STDTEKEIES SSRKTETSPP RKAQIVGWPP VRSYRKNNIQ SKKNESEHEG QGIYVKVSMD
101: GAPYLRKIDL SCYKGYSELL KALEVMFKFS VGEYFERDGY KGSDFVPTYE DKDGDWMLIG DVPWEMFICT CKRLRIMKGS EAKGLGCGV
101: GAPYLRKIDL SCYKGYSELL KALEVMFKFS VGEYFERDGY KGSDFVPTYE DKDGDWMLIG DVPWEMFICT CKRLRIMKGS EAKGLGCGV
Arabidopsis Description
SHY2AUX/IAA transcriptional regulator family protein [Source:TAIR;Acc:AT1G04240]
SUBAcon: [plastid,nucleus,cytosol]
SUBAcon: [plastid,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.