Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 6
- plastid 1
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| CDX67912 | nucleus |
| CDX68112 | |
| CDX71968 | |
| CDX73212 | |
| CDX76680 | nucleus |
| CDX80168 | |
| CDX80545 | |
| CDX80590 | |
| CDX85931 | |
| CDX87072 | |
| CDX87307 | |
| CDX87650 | |
| CDX87863 | |
| CDX88204 | |
| CDX89163 | nucleus |
| CDX89832 | |
| CDX90899 | |
| CDX90932 | |
| CDY03088 | |
| CDY06836 | |
| CDY10068 | |
| CDY11468 | nucleus |
| CDY13521 | |
| CDY15493 | |
| CDY16034 | |
| CDY17621 | |
| CDY18013 | |
| CDY18214 | |
| CDY19790 | |
| CDY21068 | |
| CDY21896 | |
| CDY21947 | |
| CDY22060 | |
| CDY22108 | |
| CDY22876 | |
| CDY25909 | |
| CDY26594 | |
| CDY27511 | |
| CDY28523 | |
| CDY31282 | |
| CDY31545 | |
| CDY32537 | |
| CDY33844 | |
| CDY34211 | |
| CDY38297 | |
| CDY39073 | |
| CDY39982 | |
| CDY46538 | |
| CDY47946 | |
| CDY48005 | |
| CDY53439 | |
| CDY53774 | |
| CDY53998 | nucleus |
| CDY61501 | |
| CDY63072 | |
| CDY68868 | nucleus |
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra033886.1-P | Field mustard | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 91.95 | 66.12 |
| CDY10349 | Canola | endoplasmic reticulum, extracellular | 90.23 | 63.82 |
| CDX92973 | Canola | cytosol, nucleus, plastid | 85.63 | 62.87 |
| AT3G23050.1 | Thale cress | cytosol, nucleus, plastid | 86.78 | 62.14 |
| CDY30781 | Canola | cytosol, nucleus, plastid | 84.48 | 61.25 |
| CDY63910 | Canola | cytosol, nucleus, plastid | 84.48 | 61.25 |
| CDY62130 | Canola | cytosol, nucleus, plastid | 77.59 | 57.94 |
| CDY47148 | Canola | nucleus | 76.44 | 57.08 |
| KRH34377 | Soybean | nucleus | 75.29 | 54.81 |
| VIT_05s0020g04690.t01 | Wine grape | cytosol, nucleus, plastid | 74.71 | 53.5 |
| Solyc09g083290.2.1 | Tomato | nucleus | 71.84 | 52.97 |
| PGSC0003DMT400015610 | Potato | nucleus | 71.26 | 52.1 |
| CDX89832 | Canola | nucleus | 64.37 | 50.0 |
| CDY10068 | Canola | cytosol, nucleus, plastid | 65.52 | 50.0 |
| CDY32537 | Canola | nucleus | 65.52 | 50.0 |
| GSMUA_Achr10P... | Banana | nucleus | 68.97 | 49.79 |
| CDY18214 | Canola | nucleus | 63.79 | 49.55 |
| CDY41894 | Canola | cytosol, nucleus, plastid | 65.52 | 49.35 |
| CDY15493 | Canola | cytosol, nucleus, plastid | 64.94 | 49.34 |
| CDY21111 | Canola | cytosol, nucleus, plastid | 66.09 | 48.73 |
| GSMUA_Achr8P20610_001 | Banana | nucleus | 67.82 | 48.36 |
| GSMUA_Achr9P25550_001 | Banana | nucleus | 67.24 | 48.15 |
| GSMUA_Achr4P21020_001 | Banana | nucleus | 67.82 | 47.58 |
| CDY30017 | Canola | cytosol, nucleus, plastid | 64.37 | 47.26 |
| CDY40881 | Canola | cytosol | 49.43 | 46.99 |
| GSMUA_Achr9P10700_001 | Banana | nucleus | 64.94 | 46.89 |
| TraesCS5B01G058500.1 | Wheat | nucleus | 67.24 | 46.43 |
| TraesCS5D01G069300.1 | Wheat | nucleus | 67.24 | 46.43 |
| CDY50113 | Canola | cytosol, nucleus, plastid | 48.28 | 46.41 |
| TraesCS5A01G058600.1 | Wheat | nucleus | 67.24 | 46.25 |
| TraesCS5D01G392000.1 | Wheat | nucleus | 59.2 | 44.4 |
| TraesCS5B01G386800.1 | Wheat | nucleus | 59.2 | 44.02 |
| TraesCS5A01G382600.1 | Wheat | nucleus | 58.62 | 43.78 |
| CDX89833 | Canola | cytosol, nucleus, plastid | 46.55 | 43.55 |
| Os03t0742900-01 | Rice | vacuole | 58.62 | 43.22 |
| HORVU5Hr1G094220.1 | Barley | nucleus | 58.62 | 43.04 |
| Zm00001d013302_P002 | Maize | nucleus | 56.32 | 42.98 |
| EER90896 | Sorghum | nucleus | 58.05 | 42.98 |
| CDY32536 | Canola | cytosol, nucleus, plastid | 44.25 | 42.78 |
| HORVU5Hr1G014300.4 | Barley | nucleus | 67.82 | 42.75 |
| CDY18213 | Canola | cytosol, nucleus, plastid | 45.4 | 42.47 |
| CDY32934 | Canola | cytosol, nucleus, plastid | 46.55 | 42.41 |
| CDY69497 | Canola | cytosol, nucleus, plastid | 46.55 | 42.41 |
| CDY10069 | Canola | nucleus | 44.83 | 42.39 |
| EES17334 | Sorghum | cytosol | 68.39 | 42.35 |
| GSMUA_Achr4P22520_001 | Banana | nucleus | 61.49 | 42.29 |
| Os12t0601300-01 | Rice | nucleus | 67.24 | 42.24 |
| Zm00001d033976_P002 | Maize | nucleus | 57.47 | 42.19 |
| Os03t0633500-01 | Rice | cytosol | 55.75 | 41.63 |
| CDY35493 | Canola | nucleus | 40.8 | 41.52 |
| CDX92972 | Canola | nucleus | 40.8 | 41.52 |
| CDX94876 | Canola | nucleus | 40.8 | 41.52 |
| CDY40837 | Canola | nucleus | 40.8 | 41.52 |
| CDY10692 | Canola | nucleus | 40.8 | 41.28 |
| TraesCS5B01G381900.1 | Wheat | cytosol, mitochondrion, nucleus | 59.77 | 41.11 |
| CDY53735 | Canola | nucleus | 40.23 | 40.7 |
| CDY10346 | Canola | nucleus | 40.23 | 40.7 |
| CDY36883 | Canola | nucleus | 40.23 | 40.7 |
| CDY50750 | Canola | nucleus, plastid | 66.67 | 39.86 |
| CDY53305 | Canola | cytosol | 35.63 | 39.49 |
| KRG92429 | Soybean | cytosol, nucleus, plastid | 74.71 | 39.27 |
| OQU91311 | Sorghum | cytosol, mitochondrion, nucleus | 59.2 | 39.02 |
| CDX82428 | Canola | cytosol, nucleus, plastid | 43.1 | 38.66 |
| CDY06836 | Canola | nucleus | 55.75 | 38.49 |
| CDX75834 | Canola | cytosol, nucleus, plastid | 41.95 | 37.63 |
| CDY20135 | Canola | cytosol, nucleus, plastid | 41.95 | 37.06 |
| CDY21845 | Canola | cytosol, extracellular, nucleus | 41.95 | 37.06 |
| CDY68807 | Canola | nucleus | 39.08 | 34.69 |
| CDY25617 | Canola | nucleus | 52.87 | 34.59 |
| HORVU5Hr1G093580.2 | Barley | cytosol, nucleus, peroxisome | 54.6 | 33.81 |
| CDY26042 | Canola | nucleus | 37.93 | 33.67 |
| CDX89499 | Canola | nucleus | 52.3 | 33.58 |
| CDY37837 | Canola | mitochondrion | 56.9 | 33.45 |
| CDY71748 | Canola | cytosol, nucleus, plastid | 32.18 | 32.37 |
| TraesCS5D01G388300.2 | Wheat | cytosol | 58.05 | 32.06 |
| Zm00001d041416_P001 | Maize | nucleus | 62.07 | 31.4 |
| CDY68170 | Canola | nucleus, plastid | 55.75 | 31.19 |
| CDY18679 | Canola | plastid | 55.17 | 30.77 |
| TraesCS5A01G378300.2 | Wheat | cytosol, mitochondrion, nucleus | 52.87 | 30.16 |
| CDY66936 | Canola | cytosol, nucleus, plastid | 47.7 | 30.07 |
| CDY53800 | Canola | nucleus | 32.18 | 29.79 |
| CDY63072 | Canola | nucleus | 65.52 | 28.64 |
| CDY45607 | Canola | cytosol, nucleus, plastid | 54.02 | 28.57 |
| CDY08767 | Canola | cytosol, nucleus, plastid | 54.02 | 28.31 |
Protein Annotations
| Gene3D:3.10.20.90 | MapMan:35.1 | GO:A0A078FCN4 | UniProt:A0A078FCN4 | InterPro:AUX/IAA_dom | InterPro:AUX_IAA |
| EnsemblPlants:CDY10694 | ProteinID:CDY10694 | ProteinID:CDY10694.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009719 | GO:GO:0009734 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00048476001 | InterPro:IPR000270 | InterPro:PB1_dom |
| PFAM:PF02309 | PFscan:PS51745 | PANTHER:PTHR31734 | PANTHER:PTHR31734:SF89 | SUPFAM:SSF54277 | UniParc:UPI0004EF41F8 |
| SEG:seg | : | : | : | : | : |
Description
BnaA05g16680DAuxin-responsive protein [Source:UniProtKB/TrEMBL;Acc:A0A078FCN4]
Coordinates
chrLK032005:+:852346..853707
Molecular Weight (calculated)
19493.6 Da
IEP (calculated)
9.609
GRAVY (calculated)
-0.400
Length
174 amino acids
Sequence
(BLAST)
(BLAST)
001: MFTYIINVVV RRAQVVGWPP VRNYRKNIIT QQKTSGKEEA SSEKAGNSGG GASGAALVKV SMDGAPYLRK VDLKMYKSYK DFSDALAKMF SSFTMGKYGA
101: QGMIDFMNES KLMDLLNSSE YVPSYEDKDG DWMLVGDVPW EMFVDSCKRL RIMKGSEAIG LAPRAMEKYC KNRS
101: QGMIDFMNES KLMDLLNSSE YVPSYEDKDG DWMLVGDVPW EMFVDSCKRL RIMKGSEAIG LAPRAMEKYC KNRS
001: MMGSVELNLR ETELCLGLPG GDTVAPVTGN KRGFSETVDL KLNLNNEPAN KEGSTTHDVV TFDSKEKSAC PKDPAKPPAK AQVVGWPPVR SYRKNVMVSC
101: QKSSGGPEAA AFVKVSMDGA PYLRKIDLRM YKSYDELSNA LSNMFSSFTM GKHGGEEGMI DFMNERKLMD LVNSWDYVPS YEDKDGDWML VGDVPWPMFV
201: DTCKRLRLMK GSDAIGLAPR AMEKCKSRA
101: QKSSGGPEAA AFVKVSMDGA PYLRKIDLRM YKSYDELSNA LSNMFSSFTM GKHGGEEGMI DFMNERKLMD LVNSWDYVPS YEDKDGDWML VGDVPWPMFV
201: DTCKRLRLMK GSDAIGLAPR AMEKCKSRA
Arabidopsis Description
IAA17Auxin-responsive protein IAA17 [Source:UniProtKB/Swiss-Prot;Acc:P93830]
SUBAcon: [cytosol,nucleus,plastid]
SUBAcon: [cytosol,nucleus,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.