Subcellular Localization
min:
: max
Winner_takes_all: cytosol, nucleus, plastid
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 1
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY40881 | Canola | cytosol | 64.09 | 63.39 |
| CDY66936 | Canola | cytosol, nucleus, plastid | 94.48 | 61.96 |
| CDY10694 | Canola | mitochondrion | 46.41 | 48.28 |
| CDY37837 | Canola | mitochondrion | 73.48 | 44.93 |
| CDY68170 | Canola | nucleus, plastid | 72.38 | 42.12 |
| CDY18679 | Canola | plastid | 71.27 | 41.35 |
| CDY45607 | Canola | cytosol, nucleus, plastid | 71.27 | 39.21 |
| CDX92972 | Canola | nucleus | 36.46 | 38.6 |
| CDX94876 | Canola | nucleus | 36.46 | 38.6 |
| CDY08767 | Canola | cytosol, nucleus, plastid | 70.72 | 38.55 |
| CDY35493 | Canola | nucleus | 35.91 | 38.01 |
| CDY40837 | Canola | nucleus | 35.91 | 38.01 |
| CDX89832 | Canola | nucleus | 46.96 | 37.95 |
| CDY10692 | Canola | nucleus | 35.91 | 37.79 |
| CDY18214 | Canola | nucleus | 46.41 | 37.5 |
| CDY25617 | Canola | nucleus | 54.7 | 37.22 |
| CDY53735 | Canola | nucleus | 35.36 | 37.21 |
| CDY36883 | Canola | nucleus | 35.36 | 37.21 |
| CDY10346 | Canola | nucleus | 35.36 | 37.21 |
| CDY32537 | Canola | nucleus | 45.86 | 36.4 |
| CDY21111 | Canola | cytosol, nucleus, plastid | 46.96 | 36.02 |
| CDY10068 | Canola | cytosol, nucleus, plastid | 45.3 | 35.96 |
| CDY15493 | Canola | cytosol, nucleus, plastid | 45.3 | 35.81 |
| CDX89499 | Canola | nucleus | 53.59 | 35.79 |
| CDY47148 | Canola | nucleus | 45.86 | 35.62 |
| CDY41894 | Canola | cytosol, nucleus, plastid | 45.3 | 35.5 |
| CDY62130 | Canola | cytosol, nucleus, plastid | 45.3 | 35.19 |
| CDY30017 | Canola | cytosol, nucleus, plastid | 45.86 | 35.02 |
| CDX92973 | Canola | cytosol, nucleus, plastid | 45.86 | 35.02 |
| CDY32536 | Canola | cytosol, nucleus, plastid | 34.81 | 35.0 |
| CDY10349 | Canola | endoplasmic reticulum, extracellular | 47.51 | 34.96 |
| CDY63910 | Canola | cytosol, nucleus, plastid | 45.86 | 34.58 |
| CDY30781 | Canola | cytosol, nucleus, plastid | 45.86 | 34.58 |
| CDX89833 | Canola | cytosol, nucleus, plastid | 35.36 | 34.41 |
| CDY53305 | Canola | cytosol | 29.28 | 33.76 |
| CDY06836 | Canola | nucleus | 46.96 | 33.73 |
| CDY10069 | Canola | nucleus | 34.25 | 33.7 |
| CDY32934 | Canola | cytosol, nucleus, plastid | 35.36 | 33.51 |
| CDY18213 | Canola | cytosol, nucleus, plastid | 34.25 | 33.33 |
| CDY69497 | Canola | cytosol, nucleus, plastid | 34.81 | 32.98 |
| CDX82428 | Canola | cytosol, nucleus, plastid | 34.81 | 32.47 |
| CDX75834 | Canola | cytosol, nucleus, plastid | 34.25 | 31.96 |
| CDY21845 | Canola | cytosol, extracellular, nucleus | 33.15 | 30.46 |
| CDY20135 | Canola | cytosol, nucleus, plastid | 33.15 | 30.46 |
| CDY68807 | Canola | nucleus | 32.6 | 30.1 |
| CDY26042 | Canola | nucleus | 32.04 | 29.59 |
| CDY50750 | Canola | nucleus, plastid | 45.86 | 28.52 |
| CDY71748 | Canola | cytosol, nucleus, plastid | 27.07 | 28.32 |
| CDY53800 | Canola | nucleus | 29.28 | 28.19 |
| CDY63072 | Canola | nucleus | 45.86 | 20.85 |
Protein Annotations
| Gene3D:3.10.20.90 | MapMan:35.1 | GO:A0A078IM57 | UniProt:A0A078IM57 | InterPro:AUX/IAA_dom | InterPro:AUX_IAA |
| EnsemblPlants:CDY50113 | ProteinID:CDY50113 | ProteinID:CDY50113.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009719 | GO:GO:0009734 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00095923001 | InterPro:IPR000270 | InterPro:PB1_dom |
| PFAM:PF02309 | PFscan:PS51745 | PANTHER:PTHR31734 | PANTHER:PTHR31734:SF24 | SUPFAM:SSF54277 | UniParc:UPI0004EE5775 |
Description
BnaC01g43610DAuxin-responsive protein [Source:UniProtKB/TrEMBL;Acc:A0A078IM57]
Coordinates
chrLK032881:-:105992..108123
Molecular Weight (calculated)
20556.8 Da
IEP (calculated)
9.339
GRAVY (calculated)
-0.440
Length
181 amino acids
Sequence
(BLAST)
(BLAST)
001: MSTPTFPSSQ IYKYERAERG GLKEHNYLGI SDWVANQYGI DLGWPPVRSF RKNTLAATCS AAFFVKVSMD GAPYLRKVDL KSYTNYMELS TALEKMFTTF
101: TLGQCGSNKA TRKDKLCETK LKDLLNGKDS MLSYEDKDGD WMLVGDVPWE MFIDVCKKKI MKGCDAIGLA AAPRAMWRNR R
101: TLGQCGSNKA TRKDKLCETK LKDLLNGKDS MLSYEDKDGD WMLVGDVPWE MFIDVCKKKI MKGCDAIGLA AAPRAMWRNR R
001: MSYRLLSVDK DELVTSPCLK ERNYLGLSDC SSVDSSTIPN VVGKSNLNFK ATELRLGLPE SQSPERETDF GLLSPRTPDE KLLFPLLPSK DNGSATTGHK
101: NVVSGNKRGF ADTWDEFSGV KGSVRPGGGI NMMLSPKVKD VSKSIQEERS HAKGGLNNAP AAKAQVVGWP PIRSYRKNTM ASSTSKNTDE VDGKPGLGVL
201: FVKVSMDGAP YLRKVDLRTY TSYQQLSSAL EKMFSCFTLG QCGLHGAQGR ERMSEIKLKD LLHGSEFVLT YEDKDGDWML VGDVPWEIFT ETCQKLKIMK
301: GSDSIGLGAV EKSKNKERV
101: NVVSGNKRGF ADTWDEFSGV KGSVRPGGGI NMMLSPKVKD VSKSIQEERS HAKGGLNNAP AAKAQVVGWP PIRSYRKNTM ASSTSKNTDE VDGKPGLGVL
201: FVKVSMDGAP YLRKVDLRTY TSYQQLSSAL EKMFSCFTLG QCGLHGAQGR ERMSEIKLKD LLHGSEFVLT YEDKDGDWML VGDVPWEIFT ETCQKLKIMK
301: GSDSIGLGAV EKSKNKERV
Arabidopsis Description
IAA8Auxin-responsive protein [Source:UniProtKB/TrEMBL;Acc:F4IKE6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.