Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY53735 | Canola | nucleus | 97.67 | 97.67 |
| Bra039732.1-P | Field mustard | nucleus | 95.35 | 95.91 |
| AT4G14560.1 | Thale cress | nucleus | 81.98 | 83.93 |
| CDY10692 | Canola | nucleus | 78.49 | 78.49 |
| CDX94876 | Canola | nucleus | 77.91 | 78.36 |
| CDY10346 | Canola | nucleus | 77.91 | 77.91 |
| CDY40837 | Canola | nucleus | 77.33 | 77.78 |
| CDY35493 | Canola | nucleus | 77.33 | 77.78 |
| CDX92972 | Canola | nucleus | 77.33 | 77.78 |
| KRH34375 | Soybean | cytosol, nucleus | 49.42 | 69.67 |
| PGSC0003DMT400042074 | Potato | cytosol, nucleus, plastid | 66.28 | 60.0 |
| Solyc06g053840.2.1 | Tomato | nucleus | 65.7 | 59.47 |
| CDY32536 | Canola | cytosol, nucleus, plastid | 62.21 | 59.44 |
| VIT_05s0020g04680.t01 | Wine grape | nucleus | 57.56 | 58.93 |
| Solyc09g083280.2.1 | Tomato | nucleus | 66.28 | 58.16 |
| PGSC0003DMT400015655 | Potato | nucleus | 65.7 | 57.95 |
| CDY32934 | Canola | cytosol, nucleus, plastid | 63.95 | 57.59 |
| GSMUA_Achr9P10690_001 | Banana | cytosol, mitochondrion, nucleus | 45.35 | 57.35 |
| CDY10069 | Canola | nucleus | 61.05 | 57.07 |
| CDX89833 | Canola | cytosol, nucleus, plastid | 61.63 | 56.99 |
| PGSC0003DMT400034978 | Potato | cytosol, mitochondrion, nucleus | 54.07 | 56.71 |
| CDY69497 | Canola | cytosol, nucleus, plastid | 62.79 | 56.54 |
| CDY18213 | Canola | cytosol, nucleus, plastid | 61.05 | 56.45 |
| KRH69048 | Soybean | nucleus | 62.21 | 55.73 |
| KRG92430 | Soybean | nucleus | 62.21 | 55.15 |
| Solyc04g054280.1.1 | Tomato | nucleus | 50.0 | 51.81 |
| GSMUA_Achr4P05200_001 | Banana | mitochondrion | 36.63 | 50.4 |
| GSMUA_Achr5P03110_001 | Banana | nucleus | 48.84 | 50.0 |
| GSMUA_Achr9P24330_001 | Banana | nucleus | 48.84 | 49.12 |
| GSMUA_Achr4P22530_001 | Banana | nucleus | 51.16 | 48.62 |
| CDY53305 | Canola | cytosol | 43.02 | 47.13 |
| GSMUA_Achr11P... | Banana | nucleus | 46.51 | 45.98 |
| GSMUA_Achr4P21030_001 | Banana | nucleus | 52.91 | 45.96 |
| GSMUA_Achr8P20620_001 | Banana | nucleus | 48.84 | 44.68 |
| GSMUA_Achr2P12630_001 | Banana | nucleus | 51.74 | 43.84 |
| TraesCS5B01G058800.1 | Wheat | cytosol | 53.49 | 42.99 |
| TraesCS5A01G058700.1 | Wheat | cytosol | 53.49 | 42.99 |
| TraesCS5D01G069200.1 | Wheat | cytosol | 53.49 | 42.99 |
| EER98076 | Sorghum | cytosol, mitochondrion, nucleus | 49.42 | 42.71 |
| TraesCS5D01G449400.1 | Wheat | nucleus | 44.77 | 42.54 |
| EER90734 | Sorghum | cytosol, nucleus, plastid | 45.93 | 42.47 |
| TraesCS5B01G446100.1 | Wheat | cytosol, mitochondrion, nucleus | 43.6 | 42.37 |
| Os12t0601400-01 | Rice | nucleus | 48.26 | 42.13 |
| Zm00001d013071_P001 | Maize | nucleus | 44.19 | 41.99 |
| CDY10694 | Canola | mitochondrion | 40.7 | 40.23 |
| Os03t0797800-01 | Rice | nucleus | 45.93 | 40.1 |
| Zm00001d018973_P001 | Maize | nucleus | 47.09 | 40.1 |
| CDX82428 | Canola | cytosol, nucleus, plastid | 44.77 | 39.69 |
| CDX75834 | Canola | cytosol, nucleus, plastid | 44.77 | 39.69 |
| CDY20135 | Canola | cytosol, nucleus, plastid | 45.35 | 39.59 |
| CDY21845 | Canola | cytosol, extracellular, nucleus | 45.35 | 39.59 |
| TraesCS5D01G388200.1 | Wheat | nucleus | 49.42 | 39.53 |
| CDY26042 | Canola | nucleus | 44.77 | 39.29 |
| TraesCS5A01G378200.1 | Wheat | nucleus | 48.26 | 39.15 |
| CDY32537 | Canola | nucleus | 51.74 | 39.04 |
| CDY10068 | Canola | cytosol, nucleus, plastid | 51.74 | 39.04 |
| CDX89832 | Canola | nucleus | 50.58 | 38.84 |
| CDY18214 | Canola | nucleus | 50.58 | 38.84 |
| CDY40881 | Canola | cytosol | 41.28 | 38.8 |
| CDY68807 | Canola | nucleus | 44.19 | 38.78 |
| CDY41894 | Canola | cytosol, nucleus, plastid | 51.74 | 38.53 |
| EER93778 | Sorghum | cytosol, nucleus, plastid | 50.58 | 38.5 |
| Os03t0633800-01 | Rice | nucleus | 50.58 | 38.5 |
| CDY15493 | Canola | cytosol, nucleus, plastid | 51.16 | 38.43 |
| Zm00001d013707_P001 | Maize | nucleus | 50.0 | 38.39 |
| TraesCS5B01G381800.1 | Wheat | nucleus | 47.09 | 38.21 |
| CDY21111 | Canola | cytosol, nucleus, plastid | 52.33 | 38.14 |
| Zm00001d033319_P001 | Maize | nucleus | 50.0 | 38.05 |
| CDY71748 | Canola | cytosol, nucleus, plastid | 37.79 | 37.57 |
| Zm00001d041418_P001 | Maize | nucleus | 50.0 | 37.39 |
| Zm00001d030993_P001 | Maize | nucleus | 43.02 | 37.19 |
| CDY30017 | Canola | cytosol, nucleus, plastid | 51.16 | 37.13 |
| CDY47148 | Canola | nucleus | 50.0 | 36.91 |
| CDY62130 | Canola | cytosol, nucleus, plastid | 49.42 | 36.48 |
| CDY06836 | Canola | nucleus | 52.91 | 36.11 |
| Os07t0182400-01 | Rice | plastid | 45.93 | 36.07 |
| EES16315 | Sorghum | cytosol | 51.16 | 36.07 |
| CDX92973 | Canola | cytosol, nucleus, plastid | 48.84 | 35.44 |
| CDY50113 | Canola | cytosol, nucleus, plastid | 37.21 | 35.36 |
| CDY53800 | Canola | nucleus | 38.37 | 35.11 |
| CDY63910 | Canola | cytosol, nucleus, plastid | 48.26 | 34.58 |
| CDY30781 | Canola | cytosol, nucleus, plastid | 48.26 | 34.58 |
| HORVU5Hr1G106350.2 | Barley | plastid | 44.19 | 33.78 |
| CDY10349 | Canola | endoplasmic reticulum, extracellular | 48.26 | 33.74 |
| HORVU5Hr1G014290.1 | Barley | mitochondrion | 47.09 | 31.64 |
| CDY25617 | Canola | nucleus | 48.26 | 31.2 |
| CDY50750 | Canola | nucleus, plastid | 52.33 | 30.93 |
| CDX89499 | Canola | nucleus | 47.67 | 30.26 |
| HORVU5Hr1G093640.1 | Barley | mitochondrion | 51.74 | 28.34 |
| CDY68170 | Canola | nucleus, plastid | 51.16 | 28.3 |
| CDY66936 | Canola | cytosol, nucleus, plastid | 44.77 | 27.9 |
| CDY18679 | Canola | plastid | 50.58 | 27.88 |
| CDY37837 | Canola | mitochondrion | 47.67 | 27.7 |
| CDY45607 | Canola | cytosol, nucleus, plastid | 49.42 | 25.84 |
| CDY08767 | Canola | cytosol, nucleus, plastid | 49.42 | 25.6 |
| Zm00001d034463_P001 | Maize | extracellular, golgi | 43.6 | 23.44 |
| CDY63072 | Canola | nucleus | 49.42 | 21.36 |
Protein Annotations
| Gene3D:3.10.20.90 | MapMan:35.1 | GO:A0A078HJ69 | UniProt:A0A078HJ69 | InterPro:AUX/IAA_dom | InterPro:AUX_IAA |
| EnsemblPlants:CDY36883 | ProteinID:CDY36883 | ProteinID:CDY36883.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009719 | GO:GO:0009734 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00062968001 | InterPro:IPR000270 | InterPro:PB1_dom |
| PFAM:PF02309 | PFscan:PS51745 | PANTHER:PTHR31734 | PANTHER:PTHR31734:SF11 | SUPFAM:SSF54277 | UniParc:UPI0004EB97B4 |
| SEG:seg | : | : | : | : | : |
Description
BnaC08g09640DAuxin-responsive protein [Source:UniProtKB/TrEMBL;Acc:A0A078HJ69]
Coordinates
chrLK032385:-:306629..307587
Molecular Weight (calculated)
19907.6 Da
IEP (calculated)
6.792
GRAVY (calculated)
-0.831
Length
172 amino acids
Sequence
(BLAST)
(BLAST)
001: MAYEEVINEL NLKDTELRLG LPGTDEQAEV SCVKSNKRQF HQSNDEHNLK EEYPPPPAKT QIVGWPPVRS NRKNNNKSVS YVKVSMDGAP YLRKIDLKMY
101: KNYHELLKAL ENMFKFTIGE YSEREGYKGS GFVPTYEDKD GDWMLVGDVP WDMFSSSCQK LRIMKRSEAP AF
101: KNYHELLKAL ENMFKFTIGE YSEREGYKGS GFVPTYEDKD GDWMLVGDVP WDMFSSSCQK LRIMKRSEAP AF
001: MEVTNGLNLK DTELRLGLPG AQEEQQLELS CVRSNNKRKN NDSTEESAPP PAKTQIVGWP PVRSNRKNNN NKNVSYVKVS MDGAPYLRKI DLKMYKNYPE
101: LLKALENMFK FTVGEYSERE GYKGSGFVPT YEDKDGDWML VGDVPWDMFS SSCQKLRIMK GSEAPTAL
101: LLKALENMFK FTVGEYSERE GYKGSGFVPT YEDKDGDWML VGDVPWDMFS SSCQKLRIMK GSEAPTAL
Arabidopsis Description
IAA1Auxin-responsive protein [Source:UniProtKB/TrEMBL;Acc:Q67YC2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.