Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY36883 | Canola | nucleus | 83.93 | 81.98 |
| CDY53735 | Canola | nucleus | 82.74 | 80.81 |
| Bra039732.1-P | Field mustard | nucleus | 79.76 | 78.36 |
| KRH34375 | Soybean | cytosol, nucleus | 50.6 | 69.67 |
| AT5G43700.1 | Thale cress | cytosol, extracellular, nucleus | 67.86 | 61.29 |
| PGSC0003DMT400042074 | Potato | cytosol, nucleus, plastid | 67.26 | 59.47 |
| Solyc09g083280.2.1 | Tomato | nucleus | 69.05 | 59.18 |
| PGSC0003DMT400015655 | Potato | nucleus | 68.45 | 58.97 |
| Solyc06g053840.2.1 | Tomato | nucleus | 66.67 | 58.95 |
| VIT_05s0020g04680.t01 | Wine grape | nucleus | 58.93 | 58.93 |
| KRH69048 | Soybean | nucleus | 65.48 | 57.29 |
| KRG92430 | Soybean | nucleus | 66.07 | 57.22 |
| PGSC0003DMT400034978 | Potato | cytosol, mitochondrion, nucleus | 55.36 | 56.71 |
| GSMUA_Achr9P10690_001 | Banana | cytosol, mitochondrion, nucleus | 45.83 | 56.62 |
| Solyc04g054280.1.1 | Tomato | nucleus | 51.19 | 51.81 |
| GSMUA_Achr5P03110_001 | Banana | nucleus | 51.79 | 51.79 |
| GSMUA_Achr4P05200_001 | Banana | mitochondrion | 38.1 | 51.2 |
| GSMUA_Achr4P22530_001 | Banana | nucleus | 54.76 | 50.83 |
| AT3G23030.2 | Thale cress | vacuole | 76.79 | 49.43 |
| GSMUA_Achr9P24330_001 | Banana | nucleus | 49.4 | 48.54 |
| GSMUA_Achr4P21030_001 | Banana | nucleus | 55.36 | 46.97 |
| GSMUA_Achr8P20620_001 | Banana | nucleus | 52.38 | 46.81 |
| GSMUA_Achr11P... | Banana | nucleus | 48.21 | 46.55 |
| AT1G15580.1 | Thale cress | nucleus | 44.64 | 46.01 |
| GSMUA_Achr2P12630_001 | Banana | nucleus | 54.76 | 45.32 |
| EER98076 | Sorghum | cytosol, mitochondrion, nucleus | 52.38 | 44.22 |
| Zm00001d013071_P001 | Maize | nucleus | 47.62 | 44.2 |
| Os12t0601400-01 | Rice | nucleus | 51.79 | 44.16 |
| TraesCS5A01G058700.1 | Wheat | cytosol | 55.95 | 43.93 |
| TraesCS5B01G058800.1 | Wheat | cytosol | 55.95 | 43.93 |
| TraesCS5D01G069200.1 | Wheat | cytosol | 55.95 | 43.93 |
| TraesCS5D01G449400.1 | Wheat | nucleus | 47.02 | 43.65 |
| TraesCS5B01G446100.1 | Wheat | cytosol, mitochondrion, nucleus | 45.83 | 43.5 |
| EER90734 | Sorghum | cytosol, nucleus, plastid | 47.62 | 43.01 |
| Zm00001d018973_P001 | Maize | nucleus | 50.0 | 41.58 |
| Os03t0797800-01 | Rice | nucleus | 47.62 | 40.61 |
| AT1G52830.1 | Thale cress | nucleus | 45.24 | 40.21 |
| TraesCS5D01G388200.1 | Wheat | nucleus | 51.19 | 40.0 |
| AT3G15540.1 | Thale cress | nucleus | 46.43 | 39.59 |
| TraesCS5A01G378200.1 | Wheat | nucleus | 49.4 | 39.15 |
| AT3G04730.1 | Thale cress | cytosol, nucleus, plastid | 54.76 | 38.98 |
| EER93778 | Sorghum | cytosol, nucleus, plastid | 51.79 | 38.5 |
| AT1G04250.1 | Thale cress | cytosol, nucleus, plastid | 52.38 | 38.43 |
| TraesCS5B01G381800.1 | Wheat | nucleus | 48.21 | 38.21 |
| AT1G04240.2 | Thale cress | cytosol, endoplasmic reticulum, nucleus, plastid | 65.48 | 38.06 |
| Os03t0633800-01 | Rice | nucleus | 51.19 | 38.05 |
| Zm00001d013707_P001 | Maize | nucleus | 50.6 | 37.95 |
| Zm00001d041418_P001 | Maize | nucleus | 51.79 | 37.83 |
| EES16315 | Sorghum | cytosol | 54.76 | 37.7 |
| AT4G14550.2 | Thale cress | nucleus | 51.79 | 37.18 |
| Zm00001d033319_P001 | Maize | nucleus | 50.0 | 37.17 |
| Os07t0182400-01 | Rice | plastid | 48.21 | 36.99 |
| AT3G23050.1 | Thale cress | cytosol, nucleus, plastid | 52.38 | 36.21 |
| Zm00001d030993_P001 | Maize | nucleus | 42.26 | 35.68 |
| HORVU5Hr1G106350.2 | Barley | plastid | 46.43 | 34.67 |
| HORVU5Hr1G014290.1 | Barley | mitochondrion | 48.81 | 32.03 |
| AT4G29080.1 | Thale cress | nucleus | 54.17 | 29.84 |
| HORVU5Hr1G093640.1 | Barley | mitochondrion | 52.98 | 28.34 |
| AT5G65670.1 | Thale cress | nucleus | 54.17 | 26.92 |
| AT2G22670.4 | Thale cress | nucleus | 52.98 | 26.33 |
| Zm00001d034463_P001 | Maize | extracellular, golgi | 47.02 | 24.69 |
Protein Annotations
| Gene3D:3.10.20.90 | MapMan:35.1 | PDB:5C7F | EntrezGene:827103 | ProteinID:AEE83460.1 | EMBL:AK176546 |
| ArrayExpress:AT4G14560 | EnsemblPlantsGene:AT4G14560 | RefSeq:AT4G14560 | TAIR:AT4G14560 | RefSeq:AT4G14560-TAIR-G | EnsemblPlants:AT4G14560.1 |
| TAIR:AT4G14560.1 | InterPro:AUX/IAA_dom | InterPro:AUX_IAA | EMBL:AY133714 | ProteinID:CAB10235.1 | ProteinID:CAB78498.1 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009719 | GO:GO:0009733 | GO:GO:0009734 | GO:GO:0009987 | GO:GO:0042802 | GO:GO:0043565 |
| GO:GO:0044212 | Symbol:IAA1 | InterPro:IPR000270 | EMBL:L15448 | RefSeq:NP_193192.1 | UniProt:P49677 |
| InterPro:PB1_dom | PFAM:PF02309 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0007115 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0009005 | PO:PO:0009025 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009046 |
| PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020100 | PO:PO:0025022 | PO:PO:0025281 |
| PFscan:PS51745 | PANTHER:PTHR31734 | PANTHER:PTHR31734:SF11 | UniProt:Q67YC2 | SUPFAM:SSF54277 | UniParc:UPI00000017E1 |
| SEG:seg | : | : | : | : | : |
Description
IAA1Auxin-responsive protein [Source:UniProtKB/TrEMBL;Acc:Q67YC2]
Coordinates
chr4:+:8360996..8362033
Molecular Weight (calculated)
19032.6 Da
IEP (calculated)
8.155
GRAVY (calculated)
-0.810
Length
168 amino acids
Sequence
(BLAST)
(BLAST)
001: MEVTNGLNLK DTELRLGLPG AQEEQQLELS CVRSNNKRKN NDSTEESAPP PAKTQIVGWP PVRSNRKNNN NKNVSYVKVS MDGAPYLRKI DLKMYKNYPE
101: LLKALENMFK FTVGEYSERE GYKGSGFVPT YEDKDGDWML VGDVPWDMFS SSCQKLRIMK GSEAPTAL
101: LLKALENMFK FTVGEYSERE GYKGSGFVPT YEDKDGDWML VGDVPWDMFS SSCQKLRIMK GSEAPTAL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.