Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra030219.1-P | Field mustard | nucleus | 70.12 | 89.1 |
| CDY25617 | Canola | nucleus | 69.82 | 88.72 |
| CDX89499 | Canola | nucleus | 68.64 | 85.61 |
| KRH75635 | Soybean | nucleus | 59.76 | 63.92 |
| KRH39524 | Soybean | nucleus | 63.91 | 61.02 |
| KRH74432 | Soybean | nucleus | 64.2 | 60.45 |
| KRH45470 | Soybean | nucleus | 62.13 | 60.0 |
| Solyc04g076850.2.1 | Tomato | nucleus | 57.99 | 56.16 |
| PGSC0003DMT400016356 | Potato | nucleus | 57.1 | 55.3 |
| AT5G65670.1 | Thale cress | nucleus | 54.73 | 54.73 |
| KRH62157 | Soybean | nucleus | 56.8 | 53.33 |
| KRH72523 | Soybean | nucleus | 57.4 | 53.01 |
| AT4G14560.1 | Thale cress | nucleus | 26.33 | 52.98 |
| KRH16912 | Soybean | nucleus | 57.4 | 52.86 |
| AT1G04250.1 | Thale cress | cytosol, nucleus, plastid | 34.32 | 50.66 |
| AT5G43700.1 | Thale cress | cytosol, extracellular, nucleus | 27.81 | 50.54 |
| AT3G04730.1 | Thale cress | cytosol, nucleus, plastid | 35.21 | 50.42 |
| KRH52867 | Soybean | nucleus | 54.14 | 50.27 |
| VIT_18s0001g08090.t01 | Wine grape | cytosol, nucleus, vacuole | 60.65 | 50.0 |
| AT3G23050.1 | Thale cress | cytosol, nucleus, plastid | 34.62 | 48.15 |
| AT4G14550.2 | Thale cress | nucleus | 33.14 | 47.86 |
| AT4G29080.1 | Thale cress | nucleus | 42.9 | 47.54 |
| AT1G15580.1 | Thale cress | nucleus | 22.78 | 47.24 |
| AT3G15540.1 | Thale cress | nucleus | 26.04 | 44.67 |
| AT1G52830.1 | Thale cress | nucleus | 22.78 | 40.74 |
| AT3G23030.2 | Thale cress | vacuole | 26.04 | 33.72 |
| AT1G04240.2 | Thale cress | cytosol, endoplasmic reticulum, nucleus, plastid | 26.92 | 31.49 |
Protein Annotations
| Gene3D:3.10.20.90 | MapMan:35.1 | EntrezGene:816798 | ProteinID:AAD15575.1 | ProteinID:AEC07336.1 | ProteinID:AEC07338.1 |
| ProteinID:AEC07339.1 | EMBL:AF334714 | ArrayExpress:AT2G22670 | EnsemblPlantsGene:AT2G22670 | RefSeq:AT2G22670 | TAIR:AT2G22670 |
| RefSeq:AT2G22670-TAIR-G | EnsemblPlants:AT2G22670.4 | TAIR:AT2G22670.4 | InterPro:AUX/IAA_dom | InterPro:AUX_IAA | EMBL:AY059905 |
| EMBL:AY070399 | EMBL:AY087635 | EMBL:AY096452 | EMBL:AY114671 | Unigene:At.10796 | UniProt:F4IKE6 |
| GO:GO:0003674 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0007154 | GO:GO:0007165 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009653 | GO:GO:0009719 | GO:GO:0009733 | GO:GO:0009734 | GO:GO:0009791 | GO:GO:0009987 |
| GO:GO:0010311 | GO:GO:0045892 | GO:GO:1901332 | Symbol:IAA8 | InterPro:IPR000270 | RefSeq:NP_001077943.1 |
| RefSeq:NP_001189579.1 | RefSeq:NP_179852.1 | InterPro:PB1_dom | PFAM:PF02309 | PO:PO:0000013 | PO:PO:0000037 |
| PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 |
| PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 |
| PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 |
| PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 |
| PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PFscan:PS51745 | PANTHER:PTHR31734 |
| PANTHER:PTHR31734:SF24 | SUPFAM:SSF54277 | EMBL:U18410 | UniParc:UPI0001E92CAA | : | : |
Description
IAA8Auxin-responsive protein [Source:UniProtKB/TrEMBL;Acc:F4IKE6]
Coordinates
chr2:+:9636380..9638745
Molecular Weight (calculated)
37029.2 Da
IEP (calculated)
8.449
GRAVY (calculated)
-0.490
Length
338 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSGNDKIKQ VLHIEDLMSY RLLSVDKDEL VTSPCLKERN YLGLSDCSSV DSSTIPNVVG KSNLNFKATE LRLGLPESQS PERETDFGLL SPRTPDEKLL
101: FPLLPSKDNG SATTGHKNVV SGNKRGFADT WDEFSGVKGS VRPGGGINMM LSPKVKDVSK SIQEERSHAK GGLNNAPAAK AQVVGWPPIR SYRKNTMASS
201: TSKNTDEVDG KPGLGVLFVK VSMDGAPYLR KVDLRTYTSY QQLSSALEKM FSCFTLGQCG LHGAQGRERM SEIKLKDLLH GSEFVLTYED KDGDWMLVGD
301: VPWEIFTETC QKLKIMKGSD SIGLAPGAVE KSKNKERV
101: FPLLPSKDNG SATTGHKNVV SGNKRGFADT WDEFSGVKGS VRPGGGINMM LSPKVKDVSK SIQEERSHAK GGLNNAPAAK AQVVGWPPIR SYRKNTMASS
201: TSKNTDEVDG KPGLGVLFVK VSMDGAPYLR KVDLRTYTSY QQLSSALEKM FSCFTLGQCG LHGAQGRERM SEIKLKDLLH GSEFVLTYED KDGDWMLVGD
301: VPWEIFTETC QKLKIMKGSD SIGLAPGAVE KSKNKERV
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.