Subcellular Localization
min:
: max
Winner_takes_all: extracellular, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 1
- mitochondrion 1
- extracellular 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY32934 | Canola | cytosol, nucleus, plastid | 89.25 | 86.91 |
| CDY69497 | Canola | cytosol, nucleus, plastid | 87.63 | 85.34 |
| Bra027504.1-P | Field mustard | nucleus | 87.63 | 85.34 |
| KRH34375 | Soybean | cytosol, nucleus | 49.46 | 75.41 |
| AT4G14560.1 | Thale cress | nucleus | 61.29 | 67.86 |
| KRG92430 | Soybean | nucleus | 68.28 | 65.46 |
| Solyc09g083280.2.1 | Tomato | nucleus | 67.2 | 63.78 |
| PGSC0003DMT400042074 | Potato | cytosol, nucleus, plastid | 65.05 | 63.68 |
| Solyc06g053840.2.1 | Tomato | nucleus | 65.05 | 63.68 |
| PGSC0003DMT400015655 | Potato | nucleus | 66.67 | 63.59 |
| VIT_05s0020g04680.t01 | Wine grape | nucleus | 55.91 | 61.9 |
| KRH69048 | Soybean | nucleus | 63.44 | 61.46 |
| GSMUA_Achr9P10690_001 | Banana | cytosol, mitochondrion, nucleus | 44.62 | 61.03 |
| PGSC0003DMT400034978 | Potato | cytosol, mitochondrion, nucleus | 53.23 | 60.37 |
| Solyc04g054280.1.1 | Tomato | nucleus | 52.69 | 59.04 |
| GSMUA_Achr5P03110_001 | Banana | nucleus | 53.23 | 58.93 |
| GSMUA_Achr4P05200_001 | Banana | mitochondrion | 38.71 | 57.6 |
| GSMUA_Achr4P22530_001 | Banana | nucleus | 53.76 | 55.25 |
| GSMUA_Achr9P24330_001 | Banana | nucleus | 50.0 | 54.39 |
| GSMUA_Achr11P... | Banana | nucleus | 49.46 | 52.87 |
| GSMUA_Achr8P20620_001 | Banana | nucleus | 53.23 | 52.66 |
| GSMUA_Achr4P21030_001 | Banana | nucleus | 54.3 | 51.01 |
| AT1G04240.2 | Thale cress | cytosol, endoplasmic reticulum, nucleus, plastid | 78.49 | 50.52 |
| AT1G15580.1 | Thale cress | nucleus | 43.01 | 49.08 |
| GSMUA_Achr2P12630_001 | Banana | nucleus | 53.23 | 48.77 |
| Os12t0601400-01 | Rice | nucleus | 51.08 | 48.22 |
| EER98076 | Sorghum | cytosol, mitochondrion, nucleus | 51.08 | 47.74 |
| TraesCS5D01G069200.1 | Wheat | cytosol | 52.69 | 45.79 |
| TraesCS5B01G058800.1 | Wheat | cytosol | 52.69 | 45.79 |
| TraesCS5A01G058700.1 | Wheat | cytosol | 52.69 | 45.79 |
| Zm00001d018973_P001 | Maize | nucleus | 49.46 | 45.54 |
| AT3G23030.2 | Thale cress | vacuole | 63.44 | 45.21 |
| TraesCS5D01G449400.1 | Wheat | nucleus | 43.01 | 44.2 |
| Zm00001d013071_P001 | Maize | nucleus | 42.47 | 43.65 |
| TraesCS5B01G446100.1 | Wheat | cytosol, mitochondrion, nucleus | 41.4 | 43.5 |
| AT3G04730.1 | Thale cress | cytosol, nucleus, plastid | 54.3 | 42.8 |
| AT3G15540.1 | Thale cress | nucleus | 45.16 | 42.64 |
| EER93778 | Sorghum | cytosol, nucleus, plastid | 51.61 | 42.48 |
| EER90734 | Sorghum | cytosol, nucleus, plastid | 42.47 | 42.47 |
| AT1G04250.1 | Thale cress | cytosol, nucleus, plastid | 52.15 | 42.36 |
| AT1G52830.1 | Thale cress | nucleus | 43.01 | 42.33 |
| Zm00001d041418_P001 | Maize | nucleus | 52.15 | 42.17 |
| Zm00001d013707_P001 | Maize | nucleus | 50.54 | 41.96 |
| TraesCS5D01G388200.1 | Wheat | nucleus | 48.39 | 41.86 |
| TraesCS5B01G381800.1 | Wheat | nucleus | 47.31 | 41.51 |
| AT3G23050.1 | Thale cress | cytosol, nucleus, plastid | 53.76 | 41.15 |
| AT4G14550.2 | Thale cress | nucleus | 51.61 | 41.03 |
| Os07t0182400-01 | Rice | plastid | 47.85 | 40.64 |
| TraesCS5A01G378200.1 | Wheat | nucleus | 46.24 | 40.57 |
| Os03t0633800-01 | Rice | nucleus | 48.92 | 40.27 |
| Zm00001d033319_P001 | Maize | nucleus | 48.92 | 40.27 |
| EES16315 | Sorghum | cytosol | 52.15 | 39.75 |
| Os03t0797800-01 | Rice | nucleus | 41.94 | 39.59 |
| Zm00001d030993_P001 | Maize | nucleus | 41.94 | 39.2 |
| HORVU5Hr1G106350.2 | Barley | plastid | 43.01 | 35.56 |
| HORVU5Hr1G014290.1 | Barley | mitochondrion | 45.7 | 33.2 |
| AT4G29080.1 | Thale cress | nucleus | 54.3 | 33.11 |
| HORVU5Hr1G093640.1 | Barley | mitochondrion | 49.46 | 29.3 |
| AT2G22670.4 | Thale cress | nucleus | 50.54 | 27.81 |
| AT5G65670.1 | Thale cress | nucleus | 50.0 | 27.51 |
| Zm00001d034463_P001 | Maize | extracellular, golgi | 42.47 | 24.69 |
Protein Annotations
| Gene3D:3.10.20.90 | MapMan:35.1 | EntrezGene:834390 | UniProt:A0A178UTD3 | ProteinID:ADC29370.1 | ProteinID:ADC29371.1 |
| ProteinID:ADL70510.1 | ProteinID:ADL70511.1 | ProteinID:ADL70512.1 | ProteinID:ADL70514.1 | ProteinID:ADL70515.1 | ProteinID:ADL70516.1 |
| ProteinID:ADL70517.1 | ProteinID:ADL70518.1 | ProteinID:ADL70519.1 | ProteinID:ADL70521.1 | ProteinID:AED94998.1 | EMBL:AK227549 |
| ArrayExpress:AT5G43700 | EnsemblPlantsGene:AT5G43700 | RefSeq:AT5G43700 | TAIR:AT5G43700 | RefSeq:AT5G43700-TAIR-G | EnsemblPlants:AT5G43700.1 |
| TAIR:AT5G43700.1 | Symbol:ATAUX2-11 | InterPro:AUX/IAA_dom | InterPro:AUX_IAA | ProteinID:BAB11297.1 | EMBL:BT005853 |
| ProteinID:CAA37526.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009719 | GO:GO:0009733 | GO:GO:0009734 | GO:GO:0009987 | GO:GO:0043565 |
| GO:GO:0044212 | InterPro:IPR000270 | EMBL:L15450 | RefSeq:NP_199183.1 | ProteinID:OAO96424.1 | UniProt:P33077 |
| InterPro:PB1_dom | PFAM:PF02309 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 |
| PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 |
| PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 |
| PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 |
| PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 |
| PO:PO:0025022 | PO:PO:0025281 | PFscan:PS51745 | PANTHER:PTHR31734 | PANTHER:PTHR31734:SF11 | UniProt:Q0WTK3 |
| SUPFAM:SSF54277 | UniParc:UPI0000060D6F | : | : | : | : |
Description
IAA4Auxin-responsive protein IAA4 [Source:UniProtKB/Swiss-Prot;Acc:P33077]
Coordinates
chr5:+:17550179..17551715
Molecular Weight (calculated)
20976.1 Da
IEP (calculated)
5.498
GRAVY (calculated)
-0.657
Length
186 amino acids
Sequence
(BLAST)
(BLAST)
001: MEKVDVYDEL VNLKATELRL GLPGTEETVS CGKSNKRVLP EATEKEIEST GKTETASPPK AQIVGWPPVR SYRKNNVQTK KSESEGQGNY VKVSMDGAPY
101: LRKIDLTMYK QYPELMKSLE NMFKFSVGEY FEREGYKGSD FVPTYEDKDG DWMLVGDVPW EMFVSSCKRL RIMKGSEVKG LGCGGL
101: LRKIDLTMYK QYPELMKSLE NMFKFSVGEY FEREGYKGSD FVPTYEDKDG DWMLVGDVPW EMFVSSCKRL RIMKGSEVKG LGCGGL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.