Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra026755.1-P | Field mustard | nucleus | 80.37 | 83.97 |
| CDY53305 | Canola | cytosol | 79.14 | 82.17 |
| AT3G15540.1 | Thale cress | nucleus | 60.74 | 50.25 |
| AT1G52830.1 | Thale cress | nucleus | 53.99 | 46.56 |
| AT4G14560.1 | Thale cress | nucleus | 46.01 | 44.64 |
| AT5G43700.1 | Thale cress | cytosol, extracellular, nucleus | 49.08 | 43.01 |
| AT3G04730.1 | Thale cress | cytosol, nucleus, plastid | 49.69 | 34.32 |
| AT1G04250.1 | Thale cress | cytosol, nucleus, plastid | 47.24 | 33.62 |
| AT3G23050.1 | Thale cress | cytosol, nucleus, plastid | 48.47 | 32.51 |
| AT4G14550.2 | Thale cress | nucleus | 46.01 | 32.05 |
| AT3G23030.2 | Thale cress | vacuole | 49.08 | 30.65 |
| AT4G29080.1 | Thale cress | nucleus | 49.08 | 26.23 |
| AT1G04240.2 | Thale cress | cytosol, endoplasmic reticulum, nucleus, plastid | 46.01 | 25.95 |
| AT2G22670.4 | Thale cress | nucleus | 47.24 | 22.78 |
| AT5G65670.1 | Thale cress | nucleus | 47.24 | 22.78 |
Protein Annotations
| Gene3D:3.10.20.90 | MapMan:35.1 | EntrezGene:838128 | UniProt:A0A178W867 | ProteinID:AAF71983.1 | ProteinID:ADC29374.2 |
| ProteinID:ADC29375.2 | ProteinID:ADC29376.2 | ProteinID:ADC29377.2 | ProteinID:ADL70523.1 | ProteinID:ADL70525.1 | ProteinID:ADL70526.1 |
| ProteinID:ADL70527.1 | ProteinID:ADL70528.1 | ProteinID:ADL70529.1 | ProteinID:ADL70530.1 | ProteinID:ADL70531.1 | ProteinID:ADL70532.1 |
| ProteinID:ADL70533.1 | ProteinID:ADL70534.1 | ProteinID:AEE29337.1 | ArrayExpress:AT1G15580 | EnsemblPlantsGene:AT1G15580 | RefSeq:AT1G15580 |
| TAIR:AT1G15580 | RefSeq:AT1G15580-TAIR-G | EnsemblPlants:AT1G15580.1 | TAIR:AT1G15580.1 | InterPro:AUX/IAA_dom | InterPro:AUX_IAA |
| EMBL:AY150496 | ProteinID:CAA37527.1 | UniProt:D3K0C2 | GO:GO:0003674 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009719 | GO:GO:0009733 | GO:GO:0009734 | GO:GO:0009987 | Symbol:IAA5 |
| InterPro:IPR000270 | RefSeq:NP_173011.1 | ProteinID:OAP14637.1 | UniProt:P33078 | InterPro:PB1_dom | PFAM:PF02309 |
| PO:PO:0000293 | PO:PO:0007611 | PO:PO:0009046 | PFscan:PS51745 | PANTHER:PTHR31734 | PANTHER:PTHR31734:SF87 |
| SUPFAM:SSF54277 | EMBL:U18407 | UniParc:UPI00000ADA99 | : | : | : |
Description
IAA5Auxin-responsive protein IAA5 [Source:UniProtKB/Swiss-Prot;Acc:P33078]
Coordinates
chr1:-:5365512..5366497
Molecular Weight (calculated)
18355.1 Da
IEP (calculated)
6.503
GRAVY (calculated)
-0.341
Length
163 amino acids
Sequence
(BLAST)
(BLAST)
001: MANESNNLGL EITELRLGLP GDIVVSGESI SGKKRASPEV EIDLKCEPAK KSQVVGWPPV CSYRRKNSLE RTKSSYVKVS VDGAAFLRKI DLEMYKCYQD
101: LASALQILFG CYINFDDTLK ESECVPIYED KDGDWMLAGD VPWEMFLGSC KRLRIMKRSC NRG
101: LASALQILFG CYINFDDTLK ESECVPIYED KDGDWMLAGD VPWEMFLGSC KRLRIMKRSC NRG
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.