Factsheet for AT5G65670.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 1
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra037824.1-P	Field mustard	plastid	53.85	93.33
CDY68170	Canola	nucleus, plastid	83.73	91.0
CDY18679	Canola	plastid	82.84	89.74
CDY45607	Canola	cytosol, nucleus, plastid	86.09	88.45
CDY08767	Canola	cytosol, nucleus, plastid	85.8	87.35
Bra024406.1-P	Field mustard	nucleus	59.47	86.27
AT2G22670.4	Thale cress	nucleus	54.73	54.73
AT4G14560.1	Thale cress	nucleus	26.92	54.17
AT1G04250.1	Thale cress	cytosol, nucleus, plastid	36.39	53.71
AT5G43700.1	Thale cress	cytosol, extracellular, nucleus	27.51	50.0
AT3G04730.1	Thale cress	cytosol, nucleus, plastid	34.91	50.0
AT3G23050.1	Thale cress	cytosol, nucleus, plastid	35.8	49.79
AT4G14550.2	Thale cress	nucleus	32.84	47.44
AT1G15580.1	Thale cress	nucleus	22.78	47.24
AT4G29080.1	Thale cress	nucleus	40.83	45.25
AT3G15540.1	Thale cress	nucleus	26.33	45.18
AT1G52830.1	Thale cress	nucleus	23.37	41.8
AT3G23030.2	Thale cress	vacuole	26.63	34.48
AT1G04240.2	Thale cress	cytosol, endoplasmic reticulum, nucleus, plastid	28.4	33.22

Protein Annotations

Gene3D:3.10.20.90	MapMan:35.1	EntrezGene:836693	ProteinID:AED98084.1	EMBL:AF334715	ArrayExpress:AT5G65670
EnsemblPlantsGene:AT5G65670	RefSeq:AT5G65670	TAIR:AT5G65670	RefSeq:AT5G65670-TAIR-G	EnsemblPlants:AT5G65670.1	TAIR:AT5G65670.1
InterPro:AUX/IAA_dom	InterPro:AUX_IAA	EMBL:AY087089	ProteinID:BAB10673.1	ProteinID:CAA16692.1	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355
GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009719
GO:GO:0009733	GO:GO:0009734	GO:GO:0009987	GO:GO:0043565	Symbol:IAA9	InterPro:IPR000270
RefSeq:NP_851275.1	InterPro:PB1_dom	PFAM:PF02309	PO:PO:0000013	PO:PO:0000037	PO:PO:0000230
PO:PO:0000293	PO:PO:0001054	PO:PO:0001078	PO:PO:0001081	PO:PO:0001185	PO:PO:0004507
PO:PO:0007064	PO:PO:0007095	PO:PO:0007098	PO:PO:0007103	PO:PO:0007115	PO:PO:0007123
PO:PO:0007611	PO:PO:0007616	PO:PO:0008019	PO:PO:0009005	PO:PO:0009006	PO:PO:0009009
PO:PO:0009010	PO:PO:0009025	PO:PO:0009029	PO:PO:0009030	PO:PO:0009031	PO:PO:0009032
PO:PO:0009046	PO:PO:0009047	PO:PO:0009052	PO:PO:0020030	PO:PO:0020038	PO:PO:0020100
PO:PO:0020137	PO:PO:0025022	PO:PO:0025281	PFscan:PS51745	PANTHER:PTHR31734	PANTHER:PTHR31734:SF24
UniProt:Q38827	SUPFAM:SSF54277	EMBL:U18411	UniParc:UPI00000016DC	SEG:seg	:

Description

IAA9Auxin-responsive protein IAA9 [Source:UniProtKB/Swiss-Prot;Acc:Q38827]

Coordinates

chr5:+:26253408..26256544

Molecular Weight (calculated)

36407.0 Da

IEP (calculated)

6.109

GRAVY (calculated)

-0.495

Length

338 amino acids

Sequence
(BLAST)

001: MSPEEELQSN VSVASSSPTS NCISRNTLGG LKEHNYLGLS DCSSVGSSTL SPLAEDDKAT ISLKATELTL GLPGSQSPAR DTELNLLSPA KLDEKPFFPL
101: LPSKDEICSS SQKNNASGNK RGFSDTMDQF AEAKSSVYTE KNWMFPEAAA TQSVTKKDVP QNIPKGQSST TNNSSSPPAA KAQIVGWPPV RSYRKNTLAT
201: TCKNSDEVDG RPGSGALFVK VSMDGAPYLR KVDLRSYTNY GELSSALEKM FTTFTLGQCG SNGAAGKDML SETKLKDLLN GKDYVLTYED KDGDWMLVGD
301: VPWEMFIDVC KKLKIMKGCD AIGLAAAPRA MEKSKMRA

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.