Factsheet for Bra037824.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 5
plastid 5

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra001634.1-P
Bra009867.1-P
Bra012190.1-P
Bra014303.1-P
Bra016492.1-P
Bra017362.1-P
Bra018124.1-P
Bra018938.1-P
Bra021184.1-P
Bra022164.1-P
Bra024406.1-P
Bra025775.1-P
Bra026755.1-P
Bra027944.1-P
Bra034234.1-P
Bra036557.1-P
Bra037824.1-P
Bra039732.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G65670.1	Bra026755.1-P	AT1G15580.1	21734647
AT5G65670.1	Bra012190.1-P	AT1G19850.1	22096563
AT5G65670.1	Bra016492.1-P	AT1G19850.1	22096563
AT5G65670.1	Bra025775.1-P	AT1G19850.1	22096563
AT5G65670.1	Bra017362.1-P	AT1G34390.1	21734647
AT5G65670.1	Bra018124.1-P	AT1G34390.1	21734647
AT5G65670.1	Bra027944.1-P	AT1G34390.1	21734647
AT5G65670.1	Bra034234.1-P	AT1G34390.1	21734647
AT5G65670.1	Bra014303.1-P	AT1G51950.1	21734647
AT5G65670.1	Bra018938.1-P	AT1G51950.1	21734647
AT5G65670.1	Bra001634.1-P	AT3G16500.1	21734647
AT5G65670.1	Bra021184.1-P	AT3G16500.1	21734647
AT5G65670.1	Bra022164.1-P	AT3G16500.1	21734647
AT5G65670.1	Bra039732.1-P	AT4G14560.1	21734647
AT5G65670.1	Bra039732.1-P	AT4G14560.1	9342315
AT5G65670.1	Bra009867.1-P	AT5G25890.1	21734647
AT5G65670.1	Bra036557.1-P	AT5G25890.1	21734647
AT5G65670.1	Bra024406.1-P	AT5G65670.1	21734647
AT5G65670.1	Bra037824.1-P	AT5G65670.1	21734647

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra024406.1-P	Field mustard	nucleus	88.21	73.82
CDY18679	Canola	plastid	97.95	61.22
Bra031850.1-P	Field mustard	mitochondrion	84.1	56.16
AT5G65670.1	Thale cress	nucleus	93.33	53.85
Bra001899.1-P	Field mustard	nucleus	38.46	43.86
Bra033890.1-P	Field mustard	nucleus	38.46	43.6
Bra015298.1-P	Field mustard	nucleus	49.74	43.3
Bra023771.1-P	Field mustard	nucleus	37.95	43.27
Bra032520.1-P	Field mustard	nucleus	50.26	43.17
Bra030219.1-P	Field mustard	nucleus	57.95	42.48
Bra030560.1-P	Field mustard	nucleus	49.74	42.36
Bra032521.1-P	Field mustard	nucleus	38.97	42.22
Bra040398.1-P	Field mustard	nucleus	49.74	41.99
Bra039732.1-P	Field mustard	nucleus	36.41	41.52
Bra015297.1-P	Field mustard	cytosol, nucleus, plastid	39.49	41.4
Bra039855.1-P	Field mustard	nucleus	49.23	41.2
Bra033886.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	50.77	40.91
Bra001900.1-P	Field mustard	cytosol, nucleus, plastid	49.23	40.51
Bra040122.1-P	Field mustard	nucleus	46.67	40.44
Bra001598.1-P	Field mustard	nucleus	38.97	39.18
Bra027504.1-P	Field mustard	nucleus	37.95	38.74
Bra027232.1-P	Field mustard	nucleus	38.46	38.66
Bra026755.1-P	Field mustard	nucleus	30.77	38.46
Bra021117.1-P	Field mustard	cytosol, nucleus, plastid	37.95	37.56
Bra011082.1-P	Field mustard	nucleus	53.33	35.86
Bra018993.1-P	Field mustard	nucleus	35.9	34.48

Protein Annotations

Gene3D:3.10.20.90	MapMan:35.1	InterPro:AUX/IAA_dom	InterPro:AUX_IAA	EnsemblPlantsGene:Bra037824	EnsemblPlants:Bra037824.1
EnsemblPlants:Bra037824.1-P	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0007154
GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009719	GO:GO:0009734
GO:GO:0009987	InterPro:IPR000270	UniProt:M4F9R1	InterPro:PB1_dom	PFAM:PF02309	PFscan:PS51745
PANTHER:PTHR31734	PANTHER:PTHR31734:SF24	SUPFAM:SSF54277	UniParc:UPI0002541B4B	:	:

Description

AT5G65670 (E=5e-103) IAA9 | IAA9 (INDOLE-3-ACETIC ACID INDUCIBLE 9); transcription factor

Coordinates

chrA09:+:3782401..3783309

Molecular Weight (calculated)

21230.6 Da

IEP (calculated)

9.532

GRAVY (calculated)

-0.382

Length

195 amino acids

Sequence
(BLAST)

001: MFPEAVANQS VVKKEVTTNI PKGQLSTTNN SSSPPAAKAQ IVGWPPVRSY RKNTLATTCK NSDEVDGKPG SAALFVKVSM DGAPYLRKVD LRSYGNYGEL
101: SSALEKMFTT FTLGQCGSNG AAGKDMLRET KLKDFLNGKD YVLTYEDKDG DWMLVGDVPW EMFIDVCKKL KIMKGADAIG LAAAPRAMEK SKMRA

Best Arabidopsis Sequence Match ( AT5G65670.1 )
(BLAST)

001: MSPEEELQSN VSVASSSPTS NCISRNTLGG LKEHNYLGLS DCSSVGSSTL SPLAEDDKAT ISLKATELTL GLPGSQSPAR DTELNLLSPA KLDEKPFFPL
101: LPSKDEICSS SQKNNASGNK RGFSDTMDQF AEAKSSVYTE KNWMFPEAAA TQSVTKKDVP QNIPKGQSST TNNSSSPPAA KAQIVGWPPV RSYRKNTLAT
201: TCKNSDEVDG RPGSGALFVK VSMDGAPYLR KVDLRSYTNY GELSSALEKM FTTFTLGQCG SNGAAGKDML SETKLKDLLN GKDYVLTYED KDGDWMLVGD
301: VPWEMFIDVC KKLKIMKGCD AIGLAAAPRA MEKSKMRA

Arabidopsis Description

IAA9Auxin-responsive protein IAA9 [Source:UniProtKB/Swiss-Prot;Acc:Q38827]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.