Factsheet for Bra026755.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra001900.1-P
Bra002729.1-P
Bra003484.1-P
Bra007661.1-P
Bra011162.1-P
Bra012190.1-P
Bra014303.1-P
Bra014411.1-P
Bra015298.1-P
Bra016492.1-P
Bra016517.1-P
Bra017362.1-P
Bra018124.1-P
Bra018938.1-P
Bra024109.1-P
Bra025720.1-P
Bra025775.1-P
Bra026755.1-P
Bra027504.1-P
Bra027944.1-P
Bra030560.1-P
Bra032520.1-P
Bra033886.1-P
Bra034234.1-P
Bra040122.1-P
Bra040398.1-P
Bra040476.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G15580.1	Bra015298.1-P	AT1G04250.1	21734647
AT1G15580.1	Bra030560.1-P	AT1G04250.1	21734647
AT1G15580.1	Bra032520.1-P	AT1G04250.1	21734647
AT1G15580.1	Bra026755.1-P	AT1G15580.1	21734647
AT1G15580.1	Bra016517.1-P	AT1G19220.1	21734647
AT1G15580.1	Bra025720.1-P	AT1G19220.1	21734647
AT1G15580.1	Bra012190.1-P	AT1G19850.1	21734647
AT1G15580.1	Bra016492.1-P	AT1G19850.1	21734647
AT1G15580.1	Bra025775.1-P	AT1G19850.1	21734647
AT1G15580.1	Bra017362.1-P	AT1G34390.1	21734647
AT1G15580.1	Bra018124.1-P	AT1G34390.1	21734647
AT1G15580.1	Bra027944.1-P	AT1G34390.1	21734647
AT1G15580.1	Bra034234.1-P	AT1G34390.1	21734647
AT1G15580.1	Bra014303.1-P	AT1G51950.1	21734647
AT1G15580.1	Bra018938.1-P	AT1G51950.1	21734647
AT1G15580.1	Bra040476.1-P	AT2G46990.1	21734647
AT1G15580.1	Bra040122.1-P	AT3G04730.1	21734647
AT1G15580.1	Bra040398.1-P	AT3G04730.1	21734647
AT1G15580.1	Bra001900.1-P	AT3G23050.1	21734647
AT1G15580.1	Bra033886.1-P	AT3G23050.1	21734647
AT1G15580.1	Bra003484.1-P	AT3G62100.1	21734647
AT1G15580.1	Bra007661.1-P	AT3G62100.1	21734647
AT1G15580.1	Bra014411.1-P	AT3G62100.1	21734647
AT1G15580.1	Bra011162.1-P	AT4G30080.1	21734647
AT1G15580.1	Bra024109.1-P	AT4G30080.1	21734647
AT1G15580.1	Bra027504.1-P	AT5G43700.1	21734647
AT1G15580.1	Bra002729.1-P	AT5G57420.1	21734647

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY53305	Canola	cytosol	98.72	98.09
AT1G15580.1	Thale cress	nucleus	83.97	80.37
Bra027232.1-P	Field mustard	nucleus	57.69	46.39
Bra021117.1-P	Field mustard	cytosol, nucleus, plastid	58.33	46.19
Bra001598.1-P	Field mustard	nucleus	57.05	45.88
Bra001899.1-P	Field mustard	nucleus	50.0	45.61
Bra023771.1-P	Field mustard	nucleus	50.0	45.61
Bra033890.1-P	Field mustard	nucleus	50.0	45.35
Bra039732.1-P	Field mustard	nucleus	45.51	41.52
Bra018993.1-P	Field mustard	nucleus	53.21	40.89
Bra032521.1-P	Field mustard	nucleus	46.79	40.56
Bra015297.1-P	Field mustard	cytosol, nucleus, plastid	48.08	40.32
Bra027504.1-P	Field mustard	nucleus	48.08	39.27
Bra040122.1-P	Field mustard	nucleus	54.49	37.78
Bra040398.1-P	Field mustard	nucleus	53.85	36.36
Bra015298.1-P	Field mustard	nucleus	48.72	33.93
Bra032520.1-P	Field mustard	nucleus	49.36	33.92
Bra030560.1-P	Field mustard	nucleus	49.36	33.62
Bra001900.1-P	Field mustard	cytosol, nucleus, plastid	50.64	33.33
Bra033886.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	50.0	32.23
Bra039855.1-P	Field mustard	nucleus	47.44	31.76
Bra037824.1-P	Field mustard	plastid	38.46	30.77
Bra011082.1-P	Field mustard	nucleus	53.21	28.62
Bra030219.1-P	Field mustard	nucleus	47.44	27.82
Bra024406.1-P	Field mustard	nucleus	38.46	25.75
Bra031850.1-P	Field mustard	mitochondrion	43.59	23.29

Protein Annotations

Gene3D:3.10.20.90	MapMan:35.1	InterPro:AUX/IAA_dom	InterPro:AUX_IAA	EnsemblPlantsGene:Bra026755	EnsemblPlants:Bra026755.1
EnsemblPlants:Bra026755.1-P	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0007154
GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009719	GO:GO:0009733
GO:GO:0009734	GO:GO:0009987	InterPro:IPR000270	UniProt:M4ED95	InterPro:PB1_dom	PFAM:PF02309
PFscan:PS51745	PANTHER:PTHR31734	PANTHER:PTHR31734:SF87	SUPFAM:SSF54277	UniParc:UPI0002542CB9	:

Description

AT1G15580 (E=4e-071) IAA5, ATAUX2-27, AUX2-27 | IAA5 (INDOLE-3-ACETIC ACID INDUCIBLE 5); transcription factor

Coordinates

chrA09:+:33555338..33555992

Molecular Weight (calculated)

17760.6 Da

IEP (calculated)

7.824

GRAVY (calculated)

-0.243

Length

156 amino acids

Sequence
(BLAST)

001: MANESNLAHE ITELRLGLPG DIIVTGKKRV SSEVESELKC EPATKSQVVG WPPVCSFRRK NSLEETRTAY VKVSVDGAAF LRKIDLKMYK RYQDLASALQ
101: ILFGCFITFD DTLKESECVP IYEDRDGDWM LAGDVPWEMF VASCKRLRVM KRSVMK

Best Arabidopsis Sequence Match ( AT1G15580.1 )
(BLAST)

001: MANESNNLGL EITELRLGLP GDIVVSGESI SGKKRASPEV EIDLKCEPAK KSQVVGWPPV CSYRRKNSLE RTKSSYVKVS VDGAAFLRKI DLEMYKCYQD
101: LASALQILFG CYINFDDTLK ESECVPIYED KDGDWMLAGD VPWEMFLGSC KRLRIMKRSC NRG

Arabidopsis Description

IAA5Auxin-responsive protein IAA5 [Source:UniProtKB/Swiss-Prot;Acc:P33078]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.