Factsheet for Bra031850.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
nucleus 3
mitochondrion 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY37837	Canola	mitochondrion	99.66	98.31
Bra037824.1-P	Field mustard	plastid	56.16	84.1
Bra024406.1-P	Field mustard	nucleus	59.93	75.11
Bra030219.1-P	Field mustard	nucleus	50.68	55.64
Bra001899.1-P	Field mustard	nucleus	29.79	50.88
Bra023771.1-P	Field mustard	nucleus	29.79	50.88
Bra033890.1-P	Field mustard	nucleus	29.79	50.58
Bra040398.1-P	Field mustard	nucleus	38.36	48.48
Bra030560.1-P	Field mustard	nucleus	38.01	48.47
Bra032520.1-P	Field mustard	nucleus	37.67	48.46
Bra033886.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	40.07	48.35
Bra032521.1-P	Field mustard	nucleus	29.79	48.33
Bra015298.1-P	Field mustard	nucleus	36.99	48.21
Bra001900.1-P	Field mustard	cytosol, nucleus, plastid	38.7	47.68
Bra039855.1-P	Field mustard	nucleus	37.67	47.21
Bra039732.1-P	Field mustard	nucleus	27.4	46.78
Bra040122.1-P	Field mustard	nucleus	35.96	46.67
Bra015297.1-P	Field mustard	cytosol, nucleus, plastid	29.45	46.24
Bra027504.1-P	Field mustard	nucleus	29.45	45.03
Bra001598.1-P	Field mustard	nucleus	29.79	44.85
Bra027232.1-P	Field mustard	nucleus	29.11	43.81
Bra011082.1-P	Field mustard	nucleus	43.49	43.79
Bra026755.1-P	Field mustard	nucleus	23.29	43.59
Bra021117.1-P	Field mustard	cytosol, nucleus, plastid	28.77	42.64
Bra018993.1-P	Field mustard	nucleus	28.08	40.39

Protein Annotations

Gene3D:3.10.20.90	MapMan:35.1	InterPro:AUX/IAA_dom	InterPro:AUX_IAA	EnsemblPlantsGene:Bra031850	EnsemblPlants:Bra031850.1
EnsemblPlants:Bra031850.1-P	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0007154
GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009719	GO:GO:0009734
GO:GO:0009987	InterPro:IPR000270	UniProt:M4ESS0	InterPro:PB1_dom	PFAM:PF02309	PFscan:PS51745
PANTHER:PTHR31734	PANTHER:PTHR31734:SF24	SUPFAM:SSF54277	UniParc:UPI0002546ACC	SEG:seg	:

Description

AT5G65670 (E=5e-082) IAA9 | IAA9 (INDOLE-3-ACETIC ACID INDUCIBLE 9); transcription factor

Coordinates

chrA02:+:27495881..27497084

Molecular Weight (calculated)

32215.0 Da

IEP (calculated)

9.158

GRAVY (calculated)

-0.380

Length

292 amino acids

Sequence
(BLAST)

001: MVSILGNLLK KCYWRKSCRV HHQLASREHN YLGLSDCSSS SVGSSTLSGL DDKAAISLKA TELTLGLPAR ETDEKPFFPL VPSKDEVSLK KRGFSDAMDK
101: SKSSVYTEKN WMFPEGVAAN QCVMKKEATQ NMPKGQIVGW PPVRSYRKNT LATTCKNSDE VDGKPGSAAA LFVKVSMDGA PYLRKVDLRS YTNYMELSLA
201: LEKMFTTFTL GQCGANGAAG KDKLCETKLK DLLNGKDYVL TYEDKDGDWM LVGDVPWEMF IDVCKKLKIM KGSDAIGLAA APRAMEKSKM RA

Best Arabidopsis Sequence Match ( AT5G65670.1 )
(BLAST)

001: MSPEEELQSN VSVASSSPTS NCISRNTLGG LKEHNYLGLS DCSSVGSSTL SPLAEDDKAT ISLKATELTL GLPGSQSPAR DTELNLLSPA KLDEKPFFPL
101: LPSKDEICSS SQKNNASGNK RGFSDTMDQF AEAKSSVYTE KNWMFPEAAA TQSVTKKDVP QNIPKGQSST TNNSSSPPAA KAQIVGWPPV RSYRKNTLAT
201: TCKNSDEVDG RPGSGALFVK VSMDGAPYLR KVDLRSYTNY GELSSALEKM FTTFTLGQCG SNGAAGKDML SETKLKDLLN GKDYVLTYED KDGDWMLVGD
301: VPWEMFIDVC KKLKIMKGCD AIGLAAAPRA MEKSKMRA

Arabidopsis Description

IAA9Auxin-responsive protein IAA9 [Source:UniProtKB/Swiss-Prot;Acc:Q38827]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.