Factsheet for Bra001899.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX92972	Canola	nucleus	100.0	100.0
Bra023771.1-P	Field mustard	nucleus	95.32	95.32
Bra033890.1-P	Field mustard	nucleus	93.57	93.02
Bra039732.1-P	Field mustard	nucleus	75.44	75.44
KRH34375	Soybean	cytosol, nucleus	52.63	73.77
Bra032521.1-P	Field mustard	nucleus	66.08	62.78
Bra027504.1-P	Field mustard	nucleus	68.42	61.26
KRH69048	Soybean	nucleus	67.25	59.9
VIT_05s0020g04680.t01	Wine grape	nucleus	58.48	59.52
Bra015297.1-P	Field mustard	cytosol, nucleus, plastid	64.33	59.14
PGSC0003DMT400042074	Potato	cytosol, nucleus, plastid	64.91	58.42
KRG92430	Soybean	nucleus	66.08	58.25
GSMUA_Achr9P10690_001	Banana	cytosol, mitochondrion, nucleus	46.2	58.09
Solyc06g053840.2.1	Tomato	nucleus	64.33	57.89
Solyc09g083280.2.1	Tomato	nucleus	66.08	57.65
AT3G23030.2	Thale cress	vacuole	87.72	57.47
PGSC0003DMT400015655	Potato	nucleus	65.5	57.44
PGSC0003DMT400034978	Potato	cytosol, mitochondrion, nucleus	53.8	56.1
Solyc04g054280.1.1	Tomato	nucleus	53.8	55.42
GSMUA_Achr5P03110_001	Banana	nucleus	53.8	54.76
GSMUA_Achr4P05200_001	Banana	mitochondrion	38.6	52.8
GSMUA_Achr4P22530_001	Banana	nucleus	54.39	51.38
GSMUA_Achr9P24330_001	Banana	nucleus	50.29	50.29
Bra026755.1-P	Field mustard	nucleus	45.61	50.0
GSMUA_Achr11P...	Banana	nucleus	49.12	48.28
GSMUA_Achr8P20620_001	Banana	nucleus	52.63	47.87
GSMUA_Achr4P21030_001	Banana	nucleus	54.97	47.47
GSMUA_Achr2P12630_001	Banana	nucleus	55.56	46.8
Os12t0601400-01	Rice	nucleus	52.63	45.69
Zm00001d013071_P001	Maize	nucleus	47.37	44.75
TraesCS5B01G058800.1	Wheat	cytosol	55.56	44.39
TraesCS5D01G069200.1	Wheat	cytosol	55.56	44.39
TraesCS5A01G058700.1	Wheat	cytosol	55.56	44.39
TraesCS5D01G449400.1	Wheat	nucleus	46.78	44.2
TraesCS5B01G446100.1	Wheat	cytosol, mitochondrion, nucleus	45.61	44.07
EER98076	Sorghum	cytosol, mitochondrion, nucleus	50.88	43.72
Bra001598.1-P	Field mustard	nucleus	49.12	43.3
EER90734	Sorghum	cytosol, nucleus, plastid	46.78	43.01
Bra027232.1-P	Field mustard	nucleus	47.95	42.27
Bra018993.1-P	Field mustard	nucleus	49.71	41.87
Bra032520.1-P	Field mustard	nucleus	54.97	41.41
Bra021117.1-P	Field mustard	cytosol, nucleus, plastid	47.37	41.12
Zm00001d018973_P001	Maize	nucleus	48.54	41.09
Bra040122.1-P	Field mustard	nucleus	53.8	40.89
Bra015298.1-P	Field mustard	nucleus	53.22	40.62
Bra030560.1-P	Field mustard	nucleus	54.39	40.61
Bra040398.1-P	Field mustard	nucleus	53.22	39.39
Zm00001d041418_P001	Maize	nucleus	52.63	39.13
Os03t0797800-01	Rice	nucleus	45.03	39.09
TraesCS5D01G388200.1	Wheat	nucleus	49.12	39.07
Bra039855.1-P	Field mustard	nucleus	52.63	38.63
Bra037824.1-P	Field mustard	plastid	43.86	38.46
Zm00001d030993_P001	Maize	nucleus	44.44	38.19
TraesCS5B01G381800.1	Wheat	nucleus	46.78	37.74
TraesCS5A01G378200.1	Wheat	nucleus	46.78	37.74
EER93778	Sorghum	cytosol, nucleus, plastid	49.71	37.61
Os03t0633800-01	Rice	nucleus	49.71	37.61
Bra001900.1-P	Field mustard	cytosol, nucleus, plastid	51.46	37.13
EES16315	Sorghum	cytosol	52.63	36.89
Bra033886.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	52.05	36.78
Zm00001d033319_P001	Maize	nucleus	48.54	36.73
Zm00001d013707_P001	Maize	nucleus	47.95	36.61
Os07t0182400-01	Rice	plastid	45.61	35.62
HORVU5Hr1G106350.2	Barley	plastid	46.2	35.11
Bra011082.1-P	Field mustard	nucleus	56.14	33.1
Bra024406.1-P	Field mustard	nucleus	45.03	33.05
Bra030219.1-P	Field mustard	nucleus	50.88	32.71
HORVU5Hr1G014290.1	Barley	mitochondrion	47.95	32.03
Bra031850.1-P	Field mustard	mitochondrion	50.88	29.79
HORVU5Hr1G093640.1	Barley	mitochondrion	50.88	27.71
Zm00001d034463_P001	Maize	extracellular, golgi	46.2	24.69

Protein Annotations

Gene3D:3.10.20.90	MapMan:35.1	InterPro:AUX/IAA_dom	InterPro:AUX_IAA	EnsemblPlantsGene:Bra001899	EnsemblPlants:Bra001899.1
EnsemblPlants:Bra001899.1-P	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0007154
GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009719	GO:GO:0009734
GO:GO:0009987	InterPro:IPR000270	UniProt:M4CCG9	InterPro:PB1_dom	PFAM:PF02309	PFscan:PS51745
PANTHER:PTHR31734	PANTHER:PTHR31734:SF11	SUPFAM:SSF54277	UniParc:UPI000254073F	:	:

Description

AT3G23030 (E=1e-081) IAA2 | IAA2 (INDOLE-3-ACETIC ACID INDUCIBLE 2); transcription factor

Coordinates

chrA03:-:19225291..19225893

Molecular Weight (calculated)

19505.1 Da

IEP (calculated)

5.131

GRAVY (calculated)

-0.737

Length

171 amino acids

Sequence
(BLAST)

001: MAYEKVNELN LKDTELRLGL PGTEQAKEEQ EVSCVRSSKR QLQSDNEEES TPPTKSQIVG WPPVRSYRKN NNSVSYVKVS MDGAPYLRKI DLKTYKNYPE
101: LLKALENMFK FTIGEYSERE GYKGSGVLPT YEDKDGDWML VGDVPWDMFS SSCKRLRIMK GSDALVLDSA L

Best Arabidopsis Sequence Match ( AT3G23030.2 )
(BLAST)

001: MGGLKLRVPL LSPCLFLAFH ASDNTSLSSF NPNFDAPLYI SLSPFLQNSS TSSPRTRTRR RRTRQEEQST QENTQEGNTK IDIDPKAMAY EKVNELNLKD
101: TELCLGLPGR TEKIKEEQEV SCVKSNNKRL FEETRDEEES TPPTKTQIVG WPPVRSSRKN NNSVSYVKVS MDGAPYLRKI DLKTYKNYPE LLKALENMFK
201: VMIGEYCERE GYKGSGFVPT YEDKDGDWML VGDVPWDMFS SSCKRLRIMK GSDAPALDSS L

Arabidopsis Description

IAA2Auxin-responsive protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LQ54]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.