Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH34375 | Soybean | cytosol, nucleus | 55.21 | 86.89 |
| KRG92430 | Soybean | nucleus | 72.4 | 71.65 |
| CDX94876 | Canola | nucleus | 60.42 | 67.84 |
| Bra001899.1-P | Field mustard | nucleus | 59.9 | 67.25 |
| CDX92972 | Canola | nucleus | 59.9 | 67.25 |
| PGSC0003DMT400042074 | Potato | cytosol, nucleus, plastid | 65.62 | 66.32 |
| Solyc06g053840.2.1 | Tomato | nucleus | 65.62 | 66.32 |
| Bra023771.1-P | Field mustard | nucleus | 58.85 | 66.08 |
| CDY35493 | Canola | nucleus | 58.85 | 66.08 |
| CDY40837 | Canola | nucleus | 58.85 | 66.08 |
| VIT_05s0020g04680.t01 | Wine grape | nucleus | 57.81 | 66.07 |
| AT4G14560.1 | Thale cress | nucleus | 57.29 | 65.48 |
| Solyc09g083280.2.1 | Tomato | nucleus | 66.67 | 65.31 |
| PGSC0003DMT400015655 | Potato | nucleus | 66.15 | 65.13 |
| Bra033890.1-P | Field mustard | nucleus | 58.33 | 65.12 |
| CDY10692 | Canola | nucleus | 58.33 | 65.12 |
| CDY10346 | Canola | nucleus | 57.81 | 64.53 |
| AT5G43700.1 | Thale cress | cytosol, extracellular, nucleus | 61.46 | 63.44 |
| Bra027504.1-P | Field mustard | nucleus | 63.02 | 63.35 |
| CDY32934 | Canola | cytosol, nucleus, plastid | 63.02 | 63.35 |
| CDY69497 | Canola | cytosol, nucleus, plastid | 61.98 | 62.3 |
| CDY36883 | Canola | nucleus | 55.73 | 62.21 |
| KRH71338 | Soybean | nucleus | 64.58 | 61.39 |
| CDY53735 | Canola | nucleus | 54.69 | 61.05 |
| PGSC0003DMT400034978 | Potato | cytosol, mitochondrion, nucleus | 52.08 | 60.98 |
| Bra039732.1-P | Field mustard | nucleus | 54.17 | 60.82 |
| CDY32536 | Canola | cytosol, nucleus, plastid | 56.77 | 60.56 |
| CDY10069 | Canola | nucleus | 57.81 | 60.33 |
| GSMUA_Achr9P10690_001 | Banana | cytosol, mitochondrion, nucleus | 42.71 | 60.29 |
| KRG95613 | Soybean | nucleus | 64.06 | 60.29 |
| GSMUA_Achr5P03110_001 | Banana | nucleus | 52.6 | 60.12 |
| Bra032521.1-P | Field mustard | nucleus | 56.25 | 60.0 |
| KRH67288 | Soybean | nucleus | 64.06 | 59.71 |
| Bra015297.1-P | Field mustard | cytosol, nucleus, plastid | 57.29 | 59.14 |
| CDX89833 | Canola | cytosol, nucleus, plastid | 57.29 | 59.14 |
| KRH32098 | Soybean | nucleus | 53.12 | 58.62 |
| CDY18213 | Canola | cytosol, nucleus, plastid | 56.25 | 58.06 |
| Solyc04g054280.1.1 | Tomato | nucleus | 48.96 | 56.63 |
| GSMUA_Achr4P22530_001 | Banana | nucleus | 53.12 | 56.35 |
| GSMUA_Achr9P24330_001 | Banana | nucleus | 50.0 | 56.14 |
| GSMUA_Achr4P05200_001 | Banana | mitochondrion | 36.46 | 56.0 |
| GSMUA_Achr11P... | Banana | nucleus | 48.96 | 54.02 |
| GSMUA_Achr4P21030_001 | Banana | nucleus | 55.21 | 53.54 |
| GSMUA_Achr8P20620_001 | Banana | nucleus | 50.52 | 51.6 |
| GSMUA_Achr2P12630_001 | Banana | nucleus | 53.12 | 50.25 |
| EER98076 | Sorghum | cytosol, mitochondrion, nucleus | 49.48 | 47.74 |
| Os12t0601400-01 | Rice | nucleus | 48.96 | 47.72 |
| TraesCS5A01G058700.1 | Wheat | cytosol | 51.56 | 46.26 |
| TraesCS5B01G058800.1 | Wheat | cytosol | 51.56 | 46.26 |
| TraesCS5D01G069200.1 | Wheat | cytosol | 51.56 | 46.26 |
| Zm00001d013071_P001 | Maize | nucleus | 43.23 | 45.86 |
| KRH23505 | Soybean | nucleus | 43.23 | 45.36 |
| EER90734 | Sorghum | cytosol, nucleus, plastid | 43.75 | 45.16 |
| KRH09810 | Soybean | nucleus | 44.27 | 44.97 |
| TraesCS5D01G449400.1 | Wheat | nucleus | 42.19 | 44.75 |
| TraesCS5B01G446100.1 | Wheat | cytosol, mitochondrion, nucleus | 41.15 | 44.63 |
| Zm00001d018973_P001 | Maize | nucleus | 46.88 | 44.55 |
| KRH09813 | Soybean | nucleus | 42.71 | 43.85 |
| KRH47514 | Soybean | nucleus | 42.71 | 43.85 |
| KRH23504 | Soybean | nucleus | 42.19 | 42.86 |
| KRH44390 | Soybean | nucleus | 43.23 | 42.56 |
| AT3G23030.2 | Thale cress | vacuole | 57.81 | 42.53 |
| TraesCS5D01G388200.1 | Wheat | nucleus | 47.4 | 42.33 |
| Os03t0797800-01 | Rice | nucleus | 43.23 | 42.13 |
| KRG92683 | Soybean | nucleus | 48.96 | 41.41 |
| Zm00001d041418_P001 | Maize | nucleus | 49.48 | 41.3 |
| EER93778 | Sorghum | cytosol, nucleus, plastid | 48.44 | 41.15 |
| TraesCS5A01G378200.1 | Wheat | nucleus | 45.31 | 41.04 |
| TraesCS5B01G381800.1 | Wheat | nucleus | 45.31 | 41.04 |
| EES16315 | Sorghum | cytosol | 52.08 | 40.98 |
| Zm00001d033319_P001 | Maize | nucleus | 47.92 | 40.71 |
| Zm00001d013707_P001 | Maize | nucleus | 47.4 | 40.62 |
| Os03t0633800-01 | Rice | nucleus | 47.4 | 40.27 |
| Zm00001d030993_P001 | Maize | nucleus | 41.67 | 40.2 |
| Os07t0182400-01 | Rice | plastid | 45.83 | 40.18 |
| AT1G04240.2 | Thale cress | cytosol, endoplasmic reticulum, nucleus, plastid | 59.9 | 39.79 |
| KRH34377 | Soybean | nucleus | 48.96 | 39.33 |
| KRH68738 | Soybean | nucleus | 48.44 | 38.27 |
| KRG96977 | Soybean | nucleus | 45.83 | 38.26 |
| KRH67289 | Soybean | nucleus | 50.0 | 37.8 |
| KRG95616 | Soybean | nucleus | 49.48 | 37.7 |
| KRH32099 | Soybean | nucleus | 48.44 | 37.5 |
| HORVU5Hr1G106350.2 | Barley | plastid | 42.71 | 36.44 |
| KRH74730 | Soybean | plastid | 28.65 | 34.16 |
| KRH60250 | Soybean | nucleus | 50.0 | 33.45 |
| KRH34091 | Soybean | cytosol, nucleus, plastid | 40.1 | 33.33 |
| KRH23426 | Soybean | nucleus | 53.12 | 33.22 |
| KRH71337 | Soybean | nucleus | 29.17 | 32.94 |
| KRH39325 | Soybean | nucleus | 52.6 | 32.9 |
| HORVU5Hr1G014290.1 | Barley | mitochondrion | 43.23 | 32.42 |
| KRH09902 | Soybean | nucleus | 53.65 | 32.29 |
| KRH75635 | Soybean | nucleus | 51.04 | 31.01 |
| KRH44313 | Soybean | nucleus | 50.52 | 30.12 |
| HORVU5Hr1G093640.1 | Barley | mitochondrion | 48.96 | 29.94 |
| KRH47242 | Soybean | nucleus | 48.96 | 29.47 |
| KRG92429 | Soybean | cytosol, nucleus, plastid | 50.0 | 29.0 |
| KRH45470 | Soybean | nucleus | 52.6 | 28.86 |
| KRH62157 | Soybean | nucleus | 51.56 | 27.5 |
| KRH16912 | Soybean | nucleus | 52.08 | 27.25 |
| KRH39524 | Soybean | nucleus | 50.0 | 27.12 |
| KRH41538 | Soybean | golgi, plasma membrane | 50.0 | 26.89 |
| KRH72523 | Soybean | nucleus | 51.04 | 26.78 |
| KRH74432 | Soybean | nucleus | 50.0 | 26.74 |
| Zm00001d034463_P001 | Maize | extracellular, golgi | 43.23 | 25.94 |
| KRH52867 | Soybean | nucleus | 47.92 | 25.27 |
Protein Annotations
| EntrezGene:100800212 | Gene3D:3.10.20.90 | MapMan:35.1 | EMBL:ACUP02000687 | InterPro:AUX/IAA_dom | InterPro:AUX_IAA |
| EnsemblPlantsGene:GLYMA_02G000500 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0007154 |
| GO:GO:0007165 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009719 | GO:GO:0009734 |
| GO:GO:0009987 | InterPro:IPR000270 | UniProt:K7K5Q4 | EnsemblPlants:KRH69048 | ProteinID:KRH69048 | ProteinID:KRH69048.1 |
| InterPro:PB1_dom | PFAM:PF02309 | PFscan:PS51745 | PANTHER:PTHR31734 | PANTHER:PTHR31734:SF11 | SUPFAM:SSF54277 |
| UniParc:UPI0001BA81FE | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr2:-:56569..58453
Molecular Weight (calculated)
21576.8 Da
IEP (calculated)
6.546
GRAVY (calculated)
-0.602
Length
192 amino acids
Sequence
(BLAST)
(BLAST)
001: MESRVVFEND LNLKATELRL GLPGTEDKTV HAISIRNNKR QVPETSQESV SISKASPDQH VESDPAPPAK AKIVGWPPIR SYRKQSLQEG DQGDGIYVKV
101: IMDGAPYLRK IDLKVYRGYP ELLKALETMF KLTIGEYSER EGYKGSEYAP TYEDKDGDWM LVGDVPWDMF MTSCKRLRVM KGSEARGLGC GV
101: IMDGAPYLRK IDLKVYRGYP ELLKALETMF KLTIGEYSER EGYKGSEYAP TYEDKDGDWM LVGDVPWDMF MTSCKRLRVM KGSEARGLGC GV
001: MEKVDVYDEL VNLKATELRL GLPGTEETVS CGKSNKRVLP EATEKEIEST GKTETASPPK AQIVGWPPVR SYRKNNVQTK KSESEGQGNY VKVSMDGAPY
101: LRKIDLTMYK QYPELMKSLE NMFKFSVGEY FEREGYKGSD FVPTYEDKDG DWMLVGDVPW EMFVSSCKRL RIMKGSEVKG LGCGGL
101: LRKIDLTMYK QYPELMKSLE NMFKFSVGEY FEREGYKGSD FVPTYEDKDG DWMLVGDVPW EMFVSSCKRL RIMKGSEVKG LGCGGL
Arabidopsis Description
IAA4Auxin-responsive protein IAA4 [Source:UniProtKB/Swiss-Prot;Acc:P33077]
SUBAcon: [extracellular,nucleus,cytosol]
SUBAcon: [extracellular,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.