Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| KRG89021 | nucleus |
| KRG91907 | nucleus |
| KRG96377 | nucleus |
| KRH02575 | nucleus, nucleus |
| KRH05923 | nucleus |
| KRH06451 | nucleus |
| KRH12587 | nucleus, nucleus |
| KRH17404 | nucleus |
| KRH19355 | nucleus, nucleus |
| KRH22924 | nucleus |
| KRH24914 | nucleus |
| KRH26391 | nucleus |
| KRH31921 | nucleus |
| KRH34867 | nucleus |
| KRH37536 | nucleus, nucleus |
| KRH47893 | nucleus |
| KRH68108 | nucleus |
| KRH68924 | nucleus |
| KRH71533 | nucleus |
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH62157 | Soybean | nucleus | 89.56 | 90.56 |
| KRH72523 | Soybean | nucleus | 77.47 | 77.05 |
| KRH16912 | Soybean | nucleus | 77.47 | 76.84 |
| PGSC0003DMT400016356 | Potato | nucleus | 63.19 | 65.9 |
| Solyc04g076850.2.1 | Tomato | nucleus | 62.91 | 65.62 |
| KRH75635 | Soybean | nucleus | 56.59 | 65.19 |
| KRH45470 | Soybean | nucleus | 60.44 | 62.86 |
| KRH39524 | Soybean | nucleus | 60.99 | 62.71 |
| Bra030219.1-P | Field mustard | nucleus | 45.6 | 62.41 |
| CDY25617 | Canola | nucleus | 45.6 | 62.41 |
| KRH74432 | Soybean | nucleus | 61.26 | 62.12 |
| CDX89499 | Canola | nucleus | 45.33 | 60.89 |
| VIT_18s0001g08090.t01 | Wine grape | cytosol, nucleus, vacuole | 67.31 | 59.76 |
| KRH34375 | Soybean | cytosol, nucleus | 19.78 | 59.02 |
| AT2G22670.4 | Thale cress | nucleus | 50.27 | 54.14 |
| KRH39325 | Soybean | nucleus | 44.51 | 52.77 |
| KRH23505 | Soybean | nucleus | 26.37 | 52.46 |
| KRH60250 | Soybean | nucleus | 40.66 | 51.57 |
| KRG92683 | Soybean | nucleus | 32.14 | 51.54 |
| KRH23426 | Soybean | nucleus | 42.31 | 50.16 |
| KRH68738 | Soybean | nucleus | 33.24 | 49.79 |
| KRH09902 | Soybean | nucleus | 43.13 | 49.22 |
| KRH09810 | Soybean | nucleus | 25.27 | 48.68 |
| KRH74730 | Soybean | plastid | 21.43 | 48.45 |
| KRG96977 | Soybean | nucleus | 30.49 | 48.26 |
| KRH69048 | Soybean | nucleus | 25.27 | 47.92 |
| KRH71338 | Soybean | nucleus | 26.37 | 47.52 |
| KRG92430 | Soybean | nucleus | 25.27 | 47.42 |
| KRH34377 | Soybean | nucleus | 30.77 | 46.86 |
| KRH32099 | Soybean | nucleus | 31.87 | 46.77 |
| KRH09813 | Soybean | nucleus | 23.9 | 46.52 |
| KRH67288 | Soybean | nucleus | 26.1 | 46.12 |
| KRG95613 | Soybean | nucleus | 25.82 | 46.08 |
| KRH23504 | Soybean | nucleus | 23.63 | 45.5 |
| KRG95616 | Soybean | nucleus | 31.32 | 45.24 |
| KRH67289 | Soybean | nucleus | 31.04 | 44.49 |
| KRH47514 | Soybean | nucleus | 22.8 | 44.38 |
| KRH32098 | Soybean | nucleus | 21.15 | 44.25 |
| KRH34091 | Soybean | cytosol, nucleus, plastid | 28.02 | 44.16 |
| KRH44313 | Soybean | nucleus | 38.74 | 43.79 |
| KRH47242 | Soybean | nucleus | 38.19 | 43.57 |
| KRH44390 | Soybean | nucleus | 22.8 | 42.56 |
| KRH41538 | Soybean | golgi, plasma membrane | 41.21 | 42.02 |
| KRG92429 | Soybean | cytosol, nucleus, plastid | 34.07 | 37.46 |
| KRH71337 | Soybean | nucleus | 16.76 | 35.88 |
Protein Annotations
| Gene3D:3.10.20.90 | MapMan:35.1 | EMBL:ACUP02003440 | InterPro:AUX/IAA_dom | InterPro:AUX_IAA | EnsemblPlantsGene:GLYMA_06G091700 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0007154 | GO:GO:0007165 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009719 | GO:GO:0009734 | GO:GO:0009987 |
| UniProt:I1K9K9 | InterPro:IPR000270 | EnsemblPlants:KRH52867 | ProteinID:KRH52867 | ProteinID:KRH52867.1 | InterPro:PB1_dom |
| PFAM:PF02309 | PFscan:PS51745 | PANTHER:PTHR31734 | PANTHER:PTHR31734:SF18 | SUPFAM:SSF54277 | UniParc:UPI00029503AF |
| SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr6:-:7220391..7223432
Molecular Weight (calculated)
39613.1 Da
IEP (calculated)
6.892
GRAVY (calculated)
-0.429
Length
364 amino acids
Sequence
(BLAST)
(BLAST)
001: MSPPVLSIGE EEGKSNVTLL VSSSTTMESV CLKSLEFKER NYMGLSDCSS VDSSVPSFSE ETKSNLNLKA TELRLGLPGS QSPDRDSDLC LRSSTQFDEK
101: TLFPLRPLTD DHHSSAKTAV LGNKRGFSDA MNGFSSEGKF LVDSEAANPI LSPRPASNLG LKPGSTLEKV GVQQTKMKEV ATTKANEARP TIDGSANNNN
201: SAPATKKSPL IILVCQGSVV GWPPIRSFRK NSLATTSKNN EEVDGKVGVG ALFVKVSMDG APYLRKVDLE NYSTYPELSS ALERCKCGSH GILGREMLNE
301: TKLKDLLHGS EYVLTYEDRE GDWMLVGDVP WEMFIETCKR LRIMKSSDAI GLAPRAVEKC KSRT
101: TLFPLRPLTD DHHSSAKTAV LGNKRGFSDA MNGFSSEGKF LVDSEAANPI LSPRPASNLG LKPGSTLEKV GVQQTKMKEV ATTKANEARP TIDGSANNNN
201: SAPATKKSPL IILVCQGSVV GWPPIRSFRK NSLATTSKNN EEVDGKVGVG ALFVKVSMDG APYLRKVDLE NYSTYPELSS ALERCKCGSH GILGREMLNE
301: TKLKDLLHGS EYVLTYEDRE GDWMLVGDVP WEMFIETCKR LRIMKSSDAI GLAPRAVEKC KSRT
001: MSYRLLSVDK DELVTSPCLK ERNYLGLSDC SSVDSSTIPN VVGKSNLNFK ATELRLGLPE SQSPERETDF GLLSPRTPDE KLLFPLLPSK DNGSATTGHK
101: NVVSGNKRGF ADTWDEFSGV KGSVRPGGGI NMMLSPKVKD VSKSIQEERS HAKGGLNNAP AAKAQVVGWP PIRSYRKNTM ASSTSKNTDE VDGKPGLGVL
201: FVKVSMDGAP YLRKVDLRTY TSYQQLSSAL EKMFSCFTLG QCGLHGAQGR ERMSEIKLKD LLHGSEFVLT YEDKDGDWML VGDVPWEIFT ETCQKLKIMK
301: GSDSIGLAPG AVEKSKNKER V
101: NVVSGNKRGF ADTWDEFSGV KGSVRPGGGI NMMLSPKVKD VSKSIQEERS HAKGGLNNAP AAKAQVVGWP PIRSYRKNTM ASSTSKNTDE VDGKPGLGVL
201: FVKVSMDGAP YLRKVDLRTY TSYQQLSSAL EKMFSCFTLG QCGLHGAQGR ERMSEIKLKD LLHGSEFVLT YEDKDGDWML VGDVPWEIFT ETCQKLKIMK
301: GSDSIGLAPG AVEKSKNKER V
Arabidopsis Description
IAA8Auxin-responsive protein [Source:UniProtKB/TrEMBL;Acc:F4IKE6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.