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Soybean
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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 5
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:nucleus
Any Predictor:mitochondrion, nucleus
BaCelLo:nucleus
MultiLoc:nucleus
Plant-mPloc:nucleus
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:nucleus
PPI

Inferred distinct locusB in Crop

locusBlocations
KRG89021
KRH00001
KRH05923
KRH06026
KRH09813
KRH17404
KRH22924
KRH23504
KRH24914
KRH26266
KRH26391
KRH44390
KRH47514
KRH49135
KRH51289
KRH65922
KRH75716

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT5G60450.1 KRH05923 AT1G19850.1 22096563
AT5G60450.1 KRH17404 AT1G19850.1 22096563
AT5G60450.1 KRH00001 AT1G34310.1 22096563
AT5G60450.1 KRH49135 AT1G34310.1 22096563
AT5G60450.1 KRH65922 AT1G34310.1 22096563
AT5G60450.1 KRH75716 AT1G34310.1 22096563
AT5G60450.1 KRH09813 AT1G52830.1 22096563
AT5G60450.1 KRH23504 AT1G52830.1 22096563
AT5G60450.1 KRH44390 AT1G52830.1 22096563
AT5G60450.1 KRH47514 AT1G52830.1 22096563
AT5G60450.1 KRH06026 AT1G59750.1 22096563
AT5G60450.1 KRH26266 AT1G59750.1 22096563
AT5G60450.1 KRH51289 AT1G59750.1 22096563
AT5G60450.1 KRG89021 AT5G60450.1 22096563
AT5G60450.1 KRH22924 AT5G60450.1 22096563
AT5G60450.1 KRH24914 AT5G60450.1 22096563
AT5G60450.1 KRH26391 AT5G60450.1 22096563
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH24914 Soybean nucleus 94.44 94.44
KRH22924 Soybean nucleus 39.14 84.93
KRH26391 Soybean nucleus 78.91 78.22
VIT_06s0004g03130.t01 Wine grape nucleus 71.46 70.93
Solyc11g069190.1.1 Tomato nucleus 66.54 64.98
PGSC0003DMT400020839 Potato nucleus 66.54 64.98
CDY31545 Canola nucleus 59.09 61.82
CDX80168 Canola nucleus 59.09 61.66
Bra002479.1-P Field mustard nucleus 58.84 61.48
AT5G60450.1 Thale cress nucleus 60.48 60.79
KRH58711 Soybean nucleus 23.99 48.35
KRH06026 Soybean nucleus 34.09 40.6
KRH26266 Soybean nucleus 33.96 40.45
KRH51289 Soybean nucleus 33.33 39.17
KRH68924 Soybean nucleus 31.19 37.31
KRH00001 Soybean nucleus 30.43 36.3
KRH49135 Soybean nucleus 30.18 35.99
KRH75716 Soybean nucleus 31.31 35.84
KRH65922 Soybean nucleus 31.19 35.75
KRH06451 Soybean nucleus 32.2 35.61
KRH47893 Soybean nucleus 31.69 35.06
KRH63855 Soybean nucleus 37.12 34.88
KRH54110 Soybean nucleus 36.99 34.76
KRH59742 Soybean nucleus 37.5 34.62
KRH41062 Soybean nucleus 37.12 34.55
KRH68102 Soybean nucleus 24.37 32.71
KRG96367 Soybean nucleus 27.65 32.35
KRH17251 Soybean nucleus 31.82 29.89
KRH72896 Soybean nucleus 31.69 29.63
KRG98044 Soybean nucleus 31.19 29.37
KRH30740 Soybean nucleus 31.19 29.27
KRH73577 Soybean nucleus 32.58 28.79
KRH14545 Soybean nucleus 32.07 28.35
KRH11131 Soybean nucleus 32.07 28.29
KRH21113 Soybean nucleus 31.94 28.24
KRH42603 Soybean nucleus 31.31 27.4
KRH17404 Soybean nucleus 31.44 26.77
KRH05923 Soybean nucleus 31.31 26.58
KRH60117 Soybean nucleus 31.94 23.02
KRH19355 Soybean nucleus 32.07 22.46
KRH37536 Soybean nucleus 31.69 22.31
KRH12587 Soybean nucleus 31.57 22.28
KRH41404 Soybean nucleus 31.19 22.19
KRH02575 Soybean nucleus 31.82 22.18
KRH49070 Soybean nucleus 30.68 21.89
KRH74145 Soybean nucleus 30.43 21.83
Protein Annotations
EntrezGene:100816621MapMan:15.5.5.1Gene3D:2.30.30.1040Gene3D:2.40.330.10Gene3D:3.10.20.90InterPro:Auxin_resp
InterPro:B3_DNA-bdInterPro:DNA-bd_pseudobarrel_sfEnsemblPlantsGene:GLYMA_U019800GO:GO:0003674GO:GO:0003676GO:GO:0003677
GO:GO:0005488GO:GO:0005515GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005634
GO:GO:0006139GO:GO:0006351GO:GO:0006355GO:GO:0007154GO:GO:0007165GO:GO:0008150
GO:GO:0008152GO:GO:0009058GO:GO:0009719GO:GO:0009725GO:GO:0009734GO:GO:0009987
InterPro:IPR000270InterPro:IPR003340InterPro:IPR015300UniProt:K7LPW1ProteinID:KRG89020.1EnsemblPlants:KRG89021
ProteinID:KRG89021ProteinID:KRG89021.1InterPro:PB1_domPFAM:PF02362PFAM:PF06507PFscan:PS50863
PFscan:PS51745PANTHER:PTHR31384PANTHER:PTHR31384:SF20SMART:SM01019SUPFAM:SSF101936SUPFAM:SSF54277
UniParc:UPI000296A16ESEG:seg::::
Description
hypothetical protein
Coordinates
chrscaffold_21:+:3281913..3299883
Molecular Weight (calculated)
88154.2 Da
IEP (calculated)
6.351
GRAVY (calculated)
-0.433
Length
792 amino acids
Sequence
(BLAST)
001: MEIDLNHEVT EVEKNAFCDR ECEKGVGVTC WSSSTCSSST SSSSALVSSS YLELWHACAG PLTSLPKKGN VVVYFPQGHL EQVASFSPFT PLEIPTYDLQ
101: PQIFCRVVNV QLLANKENDE VYTQVTLLPQ AELEGMYLEG KELEELGAEE EGDDRSPTKS TPHMFCKTLT ASDTSTHGGF SVPRRAAEDC FPPLDYKQQR
201: PSQELVAKDL HDVEWKFRHI YRGQPRRHLL TTGWSIFVSQ KNLVSGDAVL FLRGENGELR LGIRRAVRPR NDLPESVIGS QNCYPNVLSS VANAISTKSK
301: FHVFYSPRAS QADFVVPYQK YVKSIKNPVS IGTRFKMRFE MDESQERRCC SGMLIGTSDL DPYRWPKSKW RCLMVRWDED IETNHKDRVS PWEIDPSAPL
401: PPLSIQSSPR LKKLRTGLQV ASPSHLITAA RGRGLIDFEE SVRSPKVLQG QENAGFGSLY YGCDTVTKPP GFEMSSQSHP NLGSAEVRKI TSSELSSVHP
501: FSYAGFVETN RFPRVLQGQE ICPLKSLTGK VDMNLGAWGM PNLSCTTFNL HQATKPSFQL SLFPYGDIHQ ASQASLFCSK STTFQRENVP FNKPSTQAGI
601: IVNEVGRSDL PNDHKLQGNN ISAAGNMGVS IDNNVQGKVN ACKLFGFSLS GETTTQNLQN SAKRSCTKVH KQGSLVGRAI DLSRLSGYND LLSELERLFS
701: MEGLLKDPDK GWKILYTDSE NDIMVVGDDP WHEFCDVVSK IHIYTQEEVE KMTIEMISDD THSCLEEAPV IMEASKSSSV GQPDYSPTAV RV
Best Arabidopsis Sequence Match ( AT2G33860.1 )
(BLAST)
001: MGGLIDLNVM ETEEDETQTQ TPSSASGSVS PTSSSSASVS VVSSNSAGGG VCLELWHACA GPLISLPKRG SLVLYFPQGH LEQAPDFSAA IYGLPPHVFC
101: RILDVKLHAE TTTDEVYAQV SLLPESEDIE RKVREGIIDV DGGEEDYEVL KRSNTPHMFC KTLTASDTST HGGFSVPRRA AEDCFPPLDY SQPRPSQELL
201: ARDLHGLEWR FRHIYRGQPR RHLLTTGWSA FVNKKKLVSG DAVLFLRGDD GKLRLGVRRA SQIEGTAALS AQYNQNMNHN NFSEVAHAIS THSVFSISYN
301: PKASWSNFII PAPKFLKVVD YPFCIGMRFK ARVESEDASE RRSPGIISGI SDLDPIRWPG SKWRCLLVRW DDIVANGHQQ RVSPWEIEPS GSISNSGSFV
401: TTGPKRSRIG FSSGKPDIPV SEGIRATDFE ESLRFQRVLQ GQEIFPGFIN TCSDGGAGAR RGRFKGTEFG DSYGFHKVLQ GQETVPAYSI TDHRQQHGLS
501: QRNIWCGPFQ NFSTRILPPS VSSSPSSVLL TNSNSPNGRL EDHHGGSGRC RLFGFPLTDE TTAVASATAV PCVEGNSMKG ASAVQSNHHH SQGRDIYAMR
601: DMLLDIAL
Arabidopsis Description
ARF3Auxin response factor 3 [Source:UniProtKB/Swiss-Prot;Acc:O23661]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.