CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH73577	Soybean	nucleus	95.54	95.54
KRH58711	Soybean	nucleus	39.96	91.09
Solyc12g006350.1.1	Tomato	nucleus	17.86	86.02
Solyc07g043620.2.1	Tomato	nucleus	46.54	79.43
VIT_12s0028g01170.t01	Wine grape	nucleus	76.12	73.57
PGSC0003DMT400041127	Potato	nucleus	69.08	69.39
KRH21113	Soybean	nucleus	68.53	68.53
KRH11131	Soybean	nucleus	68.3	68.15
PGSC0003DMT400074169	Potato	nucleus	66.29	67.19
KRH42603	Soybean	nucleus	67.52	66.85
KRH30740	Soybean	nucleus	56.81	60.31
KRH17251	Soybean	nucleus	56.7	60.26
KRG98044	Soybean	nucleus	56.36	60.05
KRH72896	Soybean	nucleus	56.7	59.98
GSMUA_Achr1P08230_001	Banana	mitochondrion	35.04	47.29
KRH22924	Soybean	nucleus	18.19	44.66
KRH26266	Soybean	nucleus	28.68	38.65
KRH06026	Soybean	nucleus	28.68	38.65
KRH17404	Soybean	nucleus	39.84	38.39
KRH05923	Soybean	nucleus	39.73	38.16
KRH37536	Soybean	nucleus	47.77	38.04
KRH51289	Soybean	nucleus	28.57	37.98
KRH12587	Soybean	nucleus	47.54	37.97
KRH19355	Soybean	nucleus	47.21	37.4
KRH02575	Soybean	nucleus	46.76	36.88
KRH65922	Soybean	nucleus	27.68	35.89
KRH75716	Soybean	nucleus	27.68	35.84
KRH74145	Soybean	nucleus	44.08	35.78
KRH00001	Soybean	nucleus	26.45	35.69
KRH68924	Soybean	nucleus	26.34	35.65
KRH49135	Soybean	nucleus	26.34	35.54
KRH49070	Soybean	nucleus	43.97	35.5
KRH60117	Soybean	nucleus	42.75	34.85
KRH06451	Soybean	nucleus	27.12	33.94
KRH41404	Soybean	nucleus	41.74	33.6
KRH47893	Soybean	nucleus	26.67	33.38
KRG96367	Soybean	nucleus	24.78	32.79
KRH41062	Soybean	nucleus	30.8	32.43
KRH59742	Soybean	nucleus	30.8	32.17
KRG89021	Soybean	nucleus	28.35	32.07
KRH24914	Soybean	nucleus	28.12	31.82
KRH63855	Soybean	nucleus	29.91	31.79
KRH54110	Soybean	nucleus	29.91	31.79
KRH68102	Soybean	nucleus	20.87	31.69
KRH26391	Soybean	nucleus	26.9	30.16

Protein Annotations

EntrezGene:100810798	MapMan:15.5.5.1	Gene3D:2.30.30.1040	Gene3D:2.40.330.10	Gene3D:3.10.20.90	UniProt:A0A0R0G8P7
EMBL:ACUP02008504	InterPro:AUX/IAA_dom	InterPro:Auxin_resp	InterPro:B3_DNA-bd	InterPro:DNA-bd_pseudobarrel_sf	EnsemblPlantsGene:GLYMA_14G032700
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355
GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009719
GO:GO:0009725	GO:GO:0009734	GO:GO:0009987	InterPro:IPR000270	InterPro:IPR003340	InterPro:IPR015300
EnsemblPlants:KRH14545	ProteinID:KRH14545	ProteinID:KRH14545.1	InterPro:PB1_dom	PFAM:PF02309	PFAM:PF02362
PFAM:PF06507	PFscan:PS50863	PFscan:PS51745	PANTHER:PTHR31384	PANTHER:PTHR31384:SF68	SMART:SM01019
SUPFAM:SSF101936	SUPFAM:SSF54277	UniParc:UPI0006ED7146	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr14:-:2373147..2380904

Molecular Weight (calculated)

98729.6 Da

IEP (calculated)

6.795

GRAVY (calculated)

-0.413

Length

896 amino acids

Sequence
(BLAST)

001: MKLSSSGFNP PAEEEGEKKC LNSELWHACA GPLVSLPLVG SRVVYFPQGH SEQVAASTNR EVDAHIPNYP NLPPQLICQL HNVTMHADAE TDEVYAQMTL
101: QPLSPQEQKE VYLLPAELGT PGKQPTNYFC KTLTASDTST HGGFSVPRRA AEKVFPPLDY SQQPPAQELI ARDLHDNEWK FRHIFRGQPK RHLLTTGWSV
201: FVSAKRLVAG DSVLFIWNEK NQLLLGIRRA NRPQTIMPSS VLSSDSMHIG LLAAAAHAAA TNSRFTIFYN PRASPSEFVI PLAKYVKAVY HTRISVGMRF
301: RMLFETKKSS VPRYMGTITG ISDLDPVRWP NSHWRSVKVG WDESTAGERQ PRVSLWEIEP LTTFPMYPSP FPLRLRRPWP SGLPSLYGLK DGDMGIGSPF
401: MWLQGGLGDQ GMQSLNFQGL GVTPWMQPRL DASIPGLQPE LYQAMASSAF QEIRTMDPSK SSQSLLQFQQ TSNVPSAHAS EVQRQVLPQS QPQNTLLHNY
501: QENQVPAQSQ LLQQQLHRYH PYSDPRQQQQ QLKNLPVQQQ LPNVISPLSN FASGTQSQSP PIQALASHCQ QQSFPELMRN HISGSDVSSI HSLLGSFSQD
601: GTSQLLNLSG SNSVMSSAAM LPKQITTEPP QLPSAAPQCV LPQVENLGTS QSNVSELAAL PPFAGREHSA YHAAADPQSN LLFGINIDPS SLMLQNGMSN
701: LRNIGNVNNS LSLPFSASNC GGASGTDFPL SSNMTTSSCV DESGFLQSSE NVDQANTPTG TFVKVHKSGS FGRSLDISKF SSYDELISEL ARMFGLEGQL
801: EDPKTQRSGW QLVFVDREND VLLLGDDPWQ EFVNNVWYIK ILSPLEVQQM GKGLSPSTSA PGNKLSTPAN SCDNYVSQQE LRSSRNGMAS MGSFHY

Best Arabidopsis Sequence Match ( AT1G30330.2 )
(BLAST)

001: MRLSSAGFNP QPHEVTGEKR VLNSELWHAC AGPLVSLPPV GSRVVYFPQG HSEQVAASTN KEVDAHIPNY PSLHPQLICQ LHNVTMHADV ETDEVYAQMT
101: LQPLNAQEQK DPYLPAELGV PSRQPTNYFC KTLTASDTST HGGFSVPRRA AEKVFPPLDY SQQPPAQELM ARDLHDNEWK FRHIFRGQPK RHLLTTGWSV
201: FVSAKRLVAG DSVLFIWNDK NQLLLGIRRA NRPQTVMPSS VLSSDSMHLG LLAAAAHAAA TNSRFTIFYN PRASPSEFVI PLAKYVKAVY HTRVSVGMRF
301: RMLFETEESS VRRYMGTITG ICDLDPTRWA NSHWRSVKVG WDESTAGERQ PRVSLWEIEP LTTFPMYPSP FPLRLKRPWP PGLPSFHGLK EDDMGMSMSS
401: PLMWDRGLQS LNFQGMGVNP WMQPRLDTSG LLGMQNDVYQ AMAAAALQDM RGIDPAKAAA SLLQFQNSPG FSMQSPSLVQ PQMLQQQLSQ QQQQLSQQQQ
501: QQQQLSQQQQ QQLSQQQQQQ LSQQQQQQLS QQQQQQAYLG VPETHQPQSQ AQSQSNNHLS QQQQQVVDNH NPSASSAAVV SAMSQFGSAS QPNTSPLQSM
601: TSLCHQQSFS DTNGGNNPIS PLHTLLSNFS QDESSQLLHL TRTNSAMTSS GWPSKRPAVD SSFQHSGAGN NNTQSVLEQL GQSHTSNVPP NAVSLPPFPG
701: GRECSIEQEG SASDPHSHLL FGVNIDSSSL LMPNGMSNLR SIGIEGGDST TLPFTSSNFN NDFSGNLAMT TPSSCIDESG FLQSSENLGS ENPQSNTFVK
801: VYKSGSFGRS LDISKFSSYH ELRSELARMF GLEGQLEDPV RSGWQLVFVD RENDVLLLGD DPWPEFVSSV WCIKILSPQE VQQMGKRGLE LLNSAPSSNN
901: VDKLPSNGNC DDFGNRSDPR NLGNGIASVG GSFNY

Arabidopsis Description

ARF6Auxin response factor 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZTX8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.