CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH41404	Soybean	nucleus	92.08	90.93
KRH49070	Soybean	nucleus	73.7	72.97
KRH74145	Soybean	nucleus	72.16	71.83
VIT_11s0065g00310.t01	Wine grape	nucleus	68.88	67.89
KRH58711	Soybean	nucleus	23.29	65.14
Solyc07g016180.2.1	Tomato	nucleus	65.06	64.3
PGSC0003DMT400025312	Potato	nucleus	65.15	64.27
Solyc05g047460.2.1	Tomato	nucleus	61.6	61.71
PGSC0003DMT400035592	Potato	nucleus	61.33	61.44
Os08t0520500-01	Rice	cytosol	2.64	58.0
GSMUA_Achr3P05460_001	Banana	nucleus	51.23	57.86
GSMUA_Achr9P14090_001	Banana	nucleus	47.5	57.36
Os06t0702600-01	Rice	nucleus	48.5	53.78
Os08t0520550-01	Rice	nucleus	30.76	53.06
GSMUA_Achr8P23850_001	Banana	nucleus	50.86	52.39
GSMUA_Achr5P05010_001	Banana	nucleus	41.49	52.35
GSMUA_Achr6P01740_001	Banana	nucleus	49.32	52.17
Os02t0141100-00	Rice	nucleus	50.23	49.46
EER90336	Sorghum	nucleus	52.05	49.35
TraesCS6D01G102300.1	Wheat	nucleus	50.41	49.07
OQU84350	Sorghum	nucleus	47.77	49.07
TraesCS6A01G113000.1	Wheat	nucleus	50.5	48.9
TraesCS6B01G141300.2	Wheat	nucleus	50.32	48.89
TraesCS7A01G252000.2	Wheat	nucleus	48.32	48.85
HORVU7Hr1G051930.4	Barley	nucleus	48.13	48.85
HORVU6Hr1G020330.30	Barley	nucleus	50.68	48.82
TraesCS7B01G138900.6	Wheat	nucleus	48.5	48.72
TraesCS7D01G250100.4	Wheat	nucleus	48.41	48.72
Zm00001d031522_P007	Maize	nucleus	48.13	48.71
TraesCS7D01G409700.1	Wheat	nucleus	52.05	48.68
TraesCS7A01G416400.1	Wheat	nucleus	51.96	48.68
TraesCS7B01G316600.1	Wheat	nucleus	51.87	48.55
EES15359	Sorghum	nucleus	47.86	48.04
Zm00001d014690_P014	Maize	nucleus	51.41	47.32
Zm00001d015243_P001	Maize	nucleus	46.68	46.98
HORVU7Hr1G096460.7	Barley	mitochondrion, nucleus, vacuole	51.23	46.84
KRG98044	Soybean	nucleus	34.76	45.42
KRH30740	Soybean	nucleus	34.85	45.38
KRH17251	Soybean	nucleus	34.76	45.31
KRH72896	Soybean	nucleus	34.85	45.22
KRH37536	Soybean	nucleus	46.04	44.98
KRH12587	Soybean	nucleus	45.77	44.83
KRH02575	Soybean	nucleus	45.68	44.19
KRH19355	Soybean	nucleus	45.31	44.03
KRH11131	Soybean	nucleus	35.12	42.98
KRH42603	Soybean	nucleus	35.4	42.98
KRH73577	Soybean	nucleus	35.03	42.97
KRH21113	Soybean	nucleus	35.03	42.97
KRH14545	Soybean	nucleus	34.85	42.75
KRH22924	Soybean	nucleus	14.01	42.19
KRH05923	Soybean	nucleus	34.03	40.09
KRH17404	Soybean	nucleus	33.85	40.0
KRH26266	Soybean	nucleus	23.2	38.35
KRH06026	Soybean	nucleus	23.2	38.35
KRH51289	Soybean	nucleus	23.38	38.13
KRH75716	Soybean	nucleus	23.29	36.99
KRH00001	Soybean	nucleus	21.84	36.14
KRH65922	Soybean	nucleus	22.66	36.03
KRH49135	Soybean	nucleus	21.47	35.54
KRH68924	Soybean	nucleus	21.29	35.35
KRH06451	Soybean	nucleus	22.48	34.5
KRH47893	Soybean	nucleus	22.29	34.22
KRH68102	Soybean	nucleus	17.83	33.22
KRG96367	Soybean	nucleus	20.11	32.64
KRH24914	Soybean	nucleus	23.11	32.07
KRG89021	Soybean	nucleus	23.02	31.94
KRH63855	Soybean	nucleus	24.39	31.79
KRH41062	Soybean	nucleus	24.57	31.73
KRH54110	Soybean	nucleus	24.29	31.67
KRH59742	Soybean	nucleus	24.57	31.47
KRH26391	Soybean	nucleus	22.38	30.79

Protein Annotations

EntrezGene:100803302	MapMan:15.5.5.1	Gene3D:2.30.30.1040	Gene3D:2.40.330.10	Gene3D:3.10.20.90	EMBL:ACUP02003349
InterPro:AUX/IAA_dom	InterPro:Auxin_resp	InterPro:B3_DNA-bd	InterPro:DNA-bd_pseudobarrel_sf	EnsemblPlantsGene:GLYMA_05G221300	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0007154
GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009719	GO:GO:0009725
GO:GO:0009734	GO:GO:0009987	UniProt:I1K651	InterPro:IPR000270	InterPro:IPR003340	InterPro:IPR015300
EnsemblPlants:KRH60117	ProteinID:KRH60117	ProteinID:KRH60117.1	InterPro:PB1_dom	PFAM:PF02309	PFAM:PF02362
PFAM:PF06507	PFscan:PS50863	PFscan:PS51745	PANTHER:PTHR31384	PANTHER:PTHR31384:SF9	SMART:SM01019
SUPFAM:SSF101936	SUPFAM:SSF54277	UniParc:UPI00023396B4	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr5:-:40074654..40080527

Molecular Weight (calculated)

120835.0 Da

IEP (calculated)

6.448

GRAVY (calculated)

-0.455

Length

1099 amino acids

Sequence
(BLAST)

0001: MKAQPPDGAA AVAPNAGEGG EKKTINAELW QACAGPLLNL PSPGTHVVYF PQGHSEQVAA SLKKDVDAQV PNYTNLPSKI PCLLHNVTLH ADPDTDEVYA
0101: QMTLQPVPSF DTDALLRSDI FLRSSKPQPE FFCKQLTASD TSTHGGFSVP RRAAEKIFPP LDYSVQPPAQ ELVARDLHDN VWRFRHIYRG QPKRHLLTTG
0201: WSLFIGGKRL LAGDSVLFVR DEKQQLLLGI RRANRQPSNL SSSVLSSDSM HIGVLAAAAQ AVANNSPFTV FYNPRASPSE FVIPLAKYSK AVYSHHISPG
0301: MRFRMMFETE DSGTRRYMGT IIGVSDLDSV RWKNSLWRNL QVGWDESTAE ERQSRVSVWE IEPVTTPYFI CPPPFFRSKI PRLLGMPDDE PDFNNLFKST
0401: VPWLGDDMCV KGPQALPGLS LVQWMNIQQN PALASSLQPN CGPSMSGLVL QNLPGADIAN PLGFSTSQIS QSNNVSVDAQ NILQTSQQLD HIQKPPCPSS
0501: ALGAVTQPLQ QLGDITQQPR NLTNQTLPHD QAHTQLLNPQ RVVQTNNIHQ QQQSSIQKQQ LLRSLSQNRA QKHQQTTLGL NERQIVFQSP MPDHFNQQLQ
0601: MSDNQVRFQL LQKLQQQQQT LLAQQSALQQ PALIQIQDQQ RQLLDVANNS SSPIPGQVLE NLPTLQNSLP EANSITHQIT MPSSQKNFHY SHLSQQPALL
0701: SEMSGHVGLP PTVTTNPLSA SGGSILTGVG QSVITDDVPS CSTSPSTNNR ASVLPPVVSS QIHRSTTIGD DMAQSAVTIS GASTLETMSS NANIVQPKYE
0801: VKASLNISKN QNQGNVAPQT YLNGVVQTDY LDSSSSTTSL YHFRSDTHMH QNTNPFSYNP QLVYCRDNSQ NVEVQADARN NVLIGNNVNG QMGMPSNLDS
0901: LLTKGTVGLG KELSNKFASG GLLRDLENNK GVPPEISSSM VSQTFEVPDM SFNSIDSTID GSSFLNRGPW DLPPPPPPQQ QQVQRIRTYT KVYKRGAVGR
1001: SIDITRYSGY EDLKQDLALR FGIEGQLEDL QRIGWKLVYV DHENDVLLVG DDPWEEFVNC VRCIKILSPQ EVQQMSLDGD FGNGGLPYPA GSSSDGGNA

Best Arabidopsis Sequence Match ( AT1G19220.1 )
(BLAST)

0001: MKAPSNGFLP SSNEGEKKPI NSQLWHACAG PLVSLPPVGS LVVYFPQGHS EQVAASMQKQ TDFIPNYPNL PSKLICLLHS VTLHADTETD EVYAQMTLQP
0101: VNKYDREALL ASDMGLKLNR QPTEFFCKTL TASDTSTHGG FSVPRRAAEK IFPPLDFSMQ PPAQEIVAKD LHDTTWTFRH IYRGQPKRHL LTTGWSVFVS
0201: TKRLFAGDSV LFVRDEKSQL MLGIRRANRQ TPTLSSSVIS SDSMHIGILA AAAHANANSS PFTIFFNPRA SPSEFVVPLA KYNKALYAQV SLGMRFRMMF
0301: ETEDCGVRRY MGTVTGISDL DPVRWKGSQW RNLQVGWDES TAGDRPSRVS IWEIEPVITP FYICPPPFFR PKYPRQPGMP DDELDMENAF KRAMPWMGED
0401: FGMKDAQSSM FPGLSLVQWM SMQQNNPLSG SATPQLPSAL SSFNLPNNFA SNDPSKLLNF QSPNLSSANS QFNKPNTVNH ISQQMQAQPA MVKSQQQQQQ
0501: QQQQHQHQQQ QLQQQQQLQM SQQQVQQQGI YNNGTIAVAN QVSCQSPNQP TGFSQSQLQQ QSMLPTGAKM THQNINSMGN KGLSQMTSFA QEMQFQQQLE
0601: MHNSSQLLRN QQEQSSLHSL QQNLSQNPQQ LQMQQQSSKP SPSQQLQLQL LQKLQQQQQQ QSIPPVSSSL QPQLSALQQT QSHQLQQLLS SQNQQPLAHG
0701: NNSFPASTFM QPPQIQVSPQ QQGQMSNKNL VAAGRSHSGH TDGEAPSCST SPSANNTGHD NVSPTNFLSR NQQQGQAASV SASDSVFERA SNPVQELYTK
0801: TESRISQGMM NMKSAGEHFR FKSAVTDQID VSTAGTTYCP DVVGPVQQQQ TFPLPSFGFD GDCQSHHPRN NLAFPGNLEA VTSDPLYSQK DFQNLVPNYG
0901: NTPRDIETEL SSAAISSQSF GIPSIPFKPG CSNEVGGIND SGIMNGGGLW PNQTQRMRTY TKVQKRGSVG RSIDVTRYSG YDELRHDLAR MFGIEGQLED
1001: PLTSDWKLVY TDHENDILLV GDDPWEEFVN CVQNIKILSS VEVQQMSLDG DLAAIPTTNQ ACSETDSGNA WKVHYEDTSA AASFNR

Arabidopsis Description

ARF19Auxin response factor 19 [Source:UniProtKB/Swiss-Prot;Acc:Q8RYC8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.